| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 3854038 = | 11 (0.430) | 5 (0.210) | 4/200 | 1.9 | 33.0% | intergenic (+52/+36) | h16_A3587/h16_A3588 | Hypothetical protein/putative peptidase, M20A subfamily |
| ? | AM260479 | 3854056 = | 10 (0.420) | intergenic (+70/+18) | h16_A3587/h16_A3588 | Hypothetical protein/putative peptidase, M20A subfamily | |||||
GCATTCCGAATGAGCAGGTGGAAGCAGAGTCCGCCGCGTGGTGTGCCGCGATATTGCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTCGCGCGGTTCAGGTCGTTCAGGCGCAGGTTCTCGTCCGAGTTATGGCCGCGGG > AM260479/3853919‑3854168 | gcatTCCGAATGAGCAGGTGGAAGCAGAGTCCGCCGCGTGGTGTGCCGCGATATTGCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCg < 2:516041/134‑1 (MQ=255) gagTCCGCCGCGTGGTGTGCCGCGATATTGCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGacttact > 2:289410/1‑134 (MQ=255) gagTCCGCCGCGTGGTGTGCCGCGATATTGCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGacttact > 2:917217/1‑134 (MQ=255) gtgtGCCGCGATATTGCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGa > 2:868802/1‑133 (MQ=255) atTGCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGAcagcgccagcgc > 2:718193/1‑133 (MQ=255) gCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGccac > 1:836854/1‑133 (MQ=255) tGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGAcagc > 1:325976/1‑112 (MQ=255) tGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGAcagc < 2:325976/112‑1 (MQ=255) agaACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTcgcg > 1:652427/1‑134 (MQ=255) aagtaagtcatttcgattgagccgGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGt < 1:205923‑M1/78‑1 (MQ=255) aagtaagtcatttcgattgagccgGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGt > 2:205923‑M1/25‑102 (MQ=255) aagtaagtcatttcgattgagccgGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTCGCGCGGTTCAGGTCGTTCAGGCGCAGGTtct < 1:74377‑M1/110‑1 (MQ=255) aagtaagtcatttcgattgagccgGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTCGCGCGGTTCAGGTCGTTCAGGCGCAGGTtct > 2:74377‑M1/25‑134 (MQ=255) agtaagtcatttcgattgagccgGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTCGCGCGGTTCAGGTCGTTCAGGCGCAGGTtctc < 2:662618‑M1/111‑1 (MQ=255) cGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTCGCGCGGTTCAGGTCGTTCAGGCGCAGGTtct < 2:836854/131‑1 (MQ=255) gCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTCGCGCGGTTCAGGTCGTTCAGGCGCAGGTTCTCGTCCGAGTTATGGCCGCggg > 1:735142/1‑134 (MQ=255) | GCATTCCGAATGAGCAGGTGGAAGCAGAGTCCGCCGCGTGGTGTGCCGCGATATTGCGGAAAGCTTGAGAACAAGAAAGCAAAGCGCCACGGGGTCTCCGTGGCGCTTTTGCGTTGGCCGACCGCCTGTTGGCGGTCCGGCTCAATCGAAATGACTTACTTCATCAGGTCCGACAGCGCCAGCGCCACCACCTTGGTCGCGCGGTTCAGGTCGTTCAGGCGCAGGTTCTCGTCCGAGTTATGGCCGCGGG > AM260479/3853919‑3854168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |