New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM260480 = 191235511 (0.400)4 (0.160) 4/198 2.0 30.6% coding (6247/9285 nt) nrpA Non‑ribosomal peptide synthetase
?AM260480 = 1912391 8 (0.310)coding (6211/9285 nt) nrpA Non‑ribosomal peptide synthetase

CCGCGACGCTGGCGGCGAGCTCGGCTTCCAGCACGGCCTGGCCGGCTCCTGGCTGCCAGTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAGCCGCGCAGCTTGACCTGGAAGTCCTTGCGGCCCACGTATTCCAGCACGCCGCCGGCCTGCCAGCGGCCGAGGTCGCCGGTCAGGTAGCGGCGGC  >  AM260480/1912223‑1912486
                                                                                                                                    |                                                                                                                                   
ccgcgACGCTGGCGGCGAGCTCGGCTTCCAGCACGGCCTGGCCGGCTCCTGGCTGCCAGTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGcc                                                                                                                                    <  1:104618/134‑1 (MQ=255)
      cGCTGGCGGCGAGCTCGGCTTCCAGCACGGCCTGGCCGGCTCCTGGCTGCCAGTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACg                                                                                                                              <  1:400024/134‑1 (MQ=255)
                                      tGGCCGGCTCCTGGCTGCCAGTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAgcc                                                                                              <  1:269765‑M2/134‑4 (MQ=255)
                                      tGGCCGGCTCCTGGCTGCCAGTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAg                                                                                                >  1:206132‑M2/1‑131 (MQ=255)
                                      tGGCCGGCTCCTGGCTGCCAGTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAg                                                                                                <  2:206132‑M2/132‑2 (MQ=255)
                                                          gTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAGCCGCGCAGCTTGACCTGGAAGt                                                                          <  2:269765/134‑1 (MQ=255)
                                                               ccGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCtaccgcatc                                                                                                                            <  1:23572‑M1/79‑10 (MQ=255)
                                                               ccGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCtaccgcatc                                                                                                                            >  2:23572‑M1/1‑70 (MQ=255)
                                                               ccGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAGCCGCGCAGCTTGACCTGGAAGTCCTTg                                                                     <  2:968516/134‑1 (MQ=255)
                                                                     gCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGc                                                                                                     >  1:351985/1‑96 (MQ=255)
                                                                     gCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGc                                                                                                     <  2:351985/96‑1 (MQ=255)
                                                                       cATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGcc                                                                                                                                    <  1:258004/63‑1 (MQ=255)
                                                                       cATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGcc                                                                                                                                    >  2:258004/1‑63 (MQ=255)
                                                                        aTTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAGCCGCGCAGCTTGACCTGGAAGTCCTTGCg                                                                   <  1:75839/127‑1 (MQ=255)
                                                                        aTTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAGCCGCGCAGCTTGACCTGGAAGTCCTTGCg                                                                   >  2:75839/1‑127 (MQ=255)
                                                                                                     aCCAGCGCCTGGCGCACGGCGGGATGCGCGGCtaccgcatcgagctgggcgagatc                                                                                                             <  2:547181‑M1/56‑25 (MQ=255)
                                                                                                     aCCAGCGCCTGGCGCACGGCGGGATGCGCGGCtaccgcatcgagctgggcgagatc                                                                                                             >  1:547181‑M1/1‑32 (MQ=255)
                                                                                                             cTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAGCCGCGCAGCTTGACCTGGAAGTCCTTGCGGCCCACGTATTCCAGCACGCCGCCGGCCTGCCAGCGGCCGAGGt                       >  1:270520/1‑134 (MQ=255)
                                                                                                                                  ggCtaccgcatcgagctgggcgagatcgaggccgtgctggccgcgcatcccgccgtgcgccaggcgctggtgacggtgtaccaggccgccggcagcgaatggctgacggcctactggcagccaggagccggcca  <  1:269765‑M1/134‑132 (MQ=255)
                                                                                                                                    ctaccgcatcgagctgggcgagatcgaggccgtgctggccgcgcatcccgccgtgcgccaggcgctggtgacggtgtaccaggccgccggcagcgaatggctgacggcctactggcagccaggagccggcca  <  2:206132‑M1/132‑132 (MQ=255)
                                                                                                                                    ctaccgcatcgagctgggcgagatcgaggccgtgctggccgcgcatcccgccgtgcgccaggcgctggtgacggtgtaccaggccgccggcagcgaatggctgacggcctactggcagccaggagccggcca  >  1:206132‑M1/1‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                   
CCGCGACGCTGGCGGCGAGCTCGGCTTCCAGCACGGCCTGGCCGGCTCCTGGCTGCCAGTAGGCCGTCAGCCATTCGCTGCCGGCGGCCTGGTACACCGTCACCAGCGCCTGGCGCACGGCGGGATGCGCGGCCAGCACGGCCTCGATCTCGCCCAGCTCGATGCGGTAGCCGCGCAGCTTGACCTGGAAGTCCTTGCGGCCCACGTATTCCAGCACGCCGCCGGCCTGCCAGCGGCCGAGGTCGCCGGTCAGGTAGCGGCGGC  >  AM260480/1912223‑1912486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.