Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	100038	100080	43	2 [0]	[1] 2	kfrA1	putative KfrA protein

CGCAGCGCAGCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACG  >  AY305378/99959‑100037                                                                               | cgcagcgcagCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACg  >  1:300416/1‑79 (MQ=40) cgcagcgcagCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACg  <  2:300416/79‑1 (MQ=40)                                                                               | CGCAGCGCAGCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACG  >  AY305378/99959‑100037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑