| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM260480 | 164,760 | C→T | A15V (GCC→GTC) | acoR → | transcriptional regulator of acetoin catabolism,PspF‑family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM260480 | 164,760 | 0 | C | T | 100.0% | 120.1 / NA | 32 | A15V (GCC→GTC) | acoR | transcriptional regulator of acetoin catabolism,PspF‑family |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (17/15); total (17/15) | |||||||||||
CCCGACAGTTCGCACGATCCACCGCCCCATCCGAAACATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGCCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGATCCGTCGCGCATGCAGGAGGCGCGCA > AM260480/164646‑164888 | cccGACAGTTCGCACGATCCACCGCCCCATCCGAAACATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGCGACGGTGGTCCAGGTCACCACATACCTTGCCccg > 1:430975/1‑134 (MQ=255) cACGATCCACCGCCCCATCCGAAACATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCtt > 1:289336/1‑134 (MQ=255) cACCGCCCCATCCGAAACATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGAc < 1:32811/133‑1 (MQ=255) gCCCCATCCGAAACATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGAt < 2:839018/134‑1 (MQ=255) gCCCCATCCGAAACATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGAt < 2:793613/134‑1 (MQ=255) aaaCATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCacgac > 1:169715/1‑134 (MQ=255) tGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATcg > 2:489497/1‑121 (MQ=255) tGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATcg < 1:489497/121‑1 (MQ=255) ccGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCatcatc > 1:42818/1‑133 (MQ=255) cAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCg > 2:864632/1‑99 (MQ=255) cAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCg < 1:864632/99‑1 (MQ=255) aGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGcgccgc < 2:169715/134‑1 (MQ=255) aCAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGt < 2:42818/134‑1 (MQ=255) aTGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCAc > 2:920849/1‑132 (MQ=255) ggACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCgcgc > 1:172566/1‑89 (MQ=255) ggACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCgcgc < 2:172566/89‑1 (MQ=255) ccTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGc > 2:650975/1‑93 (MQ=255) ccTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGc < 1:650975/93‑1 (MQ=255) cAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCacga > 1:825275/1‑83 (MQ=255) cAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCacga < 2:825275/83‑1 (MQ=255) cAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCg < 2:133631/115‑1 (MQ=255) cAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCg > 1:133631/1‑115 (MQ=255) cAACGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGa > 1:129602/1‑134 (MQ=255) aaCGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGt > 2:179372/1‑123 (MQ=255) aaCGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGt < 1:179372/123‑1 (MQ=255) aCGCGAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGATc > 1:131590/1‑134 (MQ=255) cgAGCACATCGAGACGGTGGTCCAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGATCCGt < 2:131590/134‑1 (MQ=255) ccAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGcgccgc < 2:73902/85‑1 (MQ=255) ccAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGcgccgc > 1:73902/1‑85 (MQ=255) ccAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGATCCGt < 2:190494/113‑1 (MQ=255) ccAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGATCCGt > 1:190494/1‑113 (MQ=255) ccAGGTCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGATCCGTCGCGCATGCAGGAGGCGCGCa > 2:488587/1‑134 (MQ=255) | CCCGACAGTTCGCACGATCCACCGCCCCATCCGAAACATGGGGCCGACGGCAGCGACGACAGGAGACAGCGATGGACCTGCGGCAACGCGAGCACATCGAGACGGTGGTCCAGGCCACCACATACCTTGCCCCGCCGGCCGTGCTTGCGGACCGGATCGCGCACGACGCCATCATCCAGAACTCATGGCGCCGCTGCGTGCACCAGTACGGCCTGGATCCGTCGCGCATGCAGGAGGCGCGCA > AM260480/164646‑164888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |