Predicted mutation
evidence seq id position mutation annotation gene description
RA AM260480 2,737,499 A→G intergenic (‑216/+28) h16_B2423 ← / ← h16_B2424 periplasmic solute binding protein/Hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AM2604802,737,4990AG100.0% 60.7 / NA 17intergenic (‑216/+28)h16_B2423/h16_B2424periplasmic solute binding protein/Hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (7/10);  total (7/10)

TGTAGGTGGCCTGCGCATGGCCAGCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAACGACAATGGCTTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTGGAGCCGCGGCAAGGCCAACGGCAATGGCGGGCGCCTGGGTGGCGGCGGGCAGCGTGGCAGTGGCCGGGGCCGCGGG  >  AM260480/2737382‑2737625
                                                                                                                     |                                                                                                                              
tgtAGGTGGCCTGCGCATGGCCAGCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAAc                                                                                                               <  1:653256/134‑1 (MQ=255)
  tAGGTGGCCTGCGCATGGCCAGCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACg                                                                                                              <  1:440557/133‑1 (MQ=255)
            gcgcATGGCCAGCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGttt                                                                                                    >  1:715843/1‑133 (MQ=255)
                      aGCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTc                                                                                           >  1:107870/1‑132 (MQ=255)
                      aGCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGa                                                                                         <  1:403661/134‑1 (MQ=255)
                       gCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAg                                                                                        <  2:86019/134‑1 (MQ=255)
                           ccggcAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGgcg                                                                                    <  1:484397/134‑1 (MQ=255)
                              gcAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGgcgcgc                                                                                 >  1:312937/1‑134 (MQ=255)
                                aGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCt                                                                               >  2:903543/1‑134 (MQ=255)
                                 gggCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTg                                                                              <  2:312937/134‑1 (MQ=255)
                                                 cgcgAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTGGAGCCGCGGCAAGGc                                                               >  1:565498/1‑133 (MQ=255)
                                                                          cACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACg                                                                                                              <  1:485427/61‑1 (MQ=255)
                                                                          cACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAGCGACATGGCGTCAAACg                                                                                                              >  2:485427/1‑61 (MQ=255)
                                                                                                       aGGGACGGGAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTGGAGCCGCGGCAAGGCCAACGGCAATGGCGGGCGCCTGGGTGGCGGCGGGCAGCGTGGCAGTGGCCGGGGc        <  2:715843/134‑1 (MQ=255)
                                                                                                             gggAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTGGAGCCGCGGCAAGGCCAACGGCAATGGCGGGCGCCTGGGTGGCGGCGGGCAGCGTGGCAGTGGCCGGGGCCGCggg  <  2:96643/134‑1 (MQ=255)
                                                                                                              ggAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTGGAGCCGCGGCAAGGCCAACGGCAAt                                                     >  2:293739/1‑82 (MQ=255)
                                                                                                              ggAGTCAGCGACATGGCGTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTGGAGCCGCGGCAAGGCCAACGGCAAt                                                     <  1:293739/82‑1 (MQ=255)
                                                                                                                     |                                                                                                                              
TGTAGGTGGCCTGCGCATGGCCAGCGGCCGGCAGGGCAAGCGCGGCGCCCGCGAGGGCGCGCGCCAGCCAGCGCCACGCGCGTGTTGCCGCGCGGCGGGAATCAGGGACGGGAGTCAACGACAATGGCTTCAAACGGTTCATGTTTCAGGGAGTCGAGGGCGCGCCTGGAGCCGCGGCAAGGCCAACGGCAATGGCGGGCGCCTGGGTGGCGGCGGGCAGCGTGGCAGTGGCCGGGGCCGCGGG  >  AM260480/2737382‑2737625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: