| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_1 | = 221 | 368 (0.920) | 227 (0.610) | 63/240 | 1.8 | 56.6% | intergenic (–/‑371) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Two‑component transcriptional response regulator, OmpR family |
| ? | AssemblyC74_contig_12 | 8 = | 0 (0.000) | intergenic (–/+152) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Polygalacturonase (EC 3.2.1.15) | |||||
Only 100 of 353 total aligned reads displayed.
TTTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/81‑221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgactTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAAATATTATTTAAG > AssemblyC74_contig_12/8‑141 TTAAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAATAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTA < 2:526349/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 1:2482757/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 1:97814/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:1624543/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:2757341/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTTGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAA < 2:3509795/135‑1 TAAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:654564/135‑1 TAAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:2621088/135‑1 TAAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA > 2:2592510/1‑135 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACG < 1:802183/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACG < 1:1719/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACG < 1:3316780/135‑1 AAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGA < 1:3230004/135‑1 AAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGAC < 1:735675/135‑1 AAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGATTTTTTCGATAGAATCATGCTTATCAAGTGGTTCTTTTTTAACGAC < 2:2485977/135‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATGGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 2:2982681/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 2:2865662/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:681635/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:3543577/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:227813/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 2:3285885/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:2008588/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 2:1108164/132‑1 AG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTCTCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:2412166/135‑1 ttTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 1:1357827/133‑1 gtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 1:2823202/133‑1 gtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:2731350/133‑1 gtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:1405837/133‑1 gtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 1:3371742/133‑1 TTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTA < 1:1402087/133‑1 GATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTT < 1:473764/135‑1 ATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTA < 2:3402080/135‑1 ATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTA < 1:2789967/135‑1 CGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCAC > 2:1847967/1‑135 CGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATATTATCAC > 1:2572712/1‑135 TTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTC < 2:2132598/134‑1 gtAATCTTTCAGAAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAA < 2:2836837/133‑1 CTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAA < 1:2054760/118‑1 ATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGAATTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTT > 1:3417986/1‑135 TATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCAT > 1:432248/1‑135 TATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCAT > 1:3061514/1‑135 TATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCAT > 2:2083639/1‑135 TATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCAT < 1:2538092/135‑1 TATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCAT > 2:497665/1‑135 GTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG > 1:2842864/1‑75 GTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAA < 2:450225/98‑1 GTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCA < 2:1787152/91‑1 TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 2:2017028/74‑1 TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAAT > 1:1513139/1‑135 TTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATG > 1:3195732/1‑135 TATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTT‑ATTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTC > 2:3104303/1‑135 ATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCA < 2:396806/135‑1 ATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCA < 1:2949017/135‑1 ATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCA > 2:3047662/1‑135 TGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATG < 2:1172913/135‑1 TGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATG < 2:1931089/135‑1 AAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAG < 2:2498766/134‑1 AGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAACAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCG < 2:147994/135‑1 AGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCG < 1:1560898/135‑1 AGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCG < 2:2369316/135‑1 AGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCG < 2:1987855/135‑1 ACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGA > 2:128679/1‑135 CTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCG < 2:2669228/133‑1 CTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCG < 1:702043/133‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:916299/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 1:1022525/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:771640/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:3386666/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 1:1843300/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 1:2175528/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:1691981/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 1:2423278/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 1:1770657/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:102957/135‑1 TGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTT > 2:2210078/1‑135 TGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTT < 1:128679/135‑1 TGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCG < 1:2620359/125‑1 tcgCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAA < 1:655811/132‑1 tcgCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTATTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAA < 2:2572712/132‑1 cgCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAG < 1:384294/133‑1 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTC > 2:1253510/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTC > 1:519924/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTC > 2:1516737/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTC > 1:2495470/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTC > 2:1667725/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTC > 1:1802393/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTC > 1:1226786/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAA > 2:3216456/1‑126 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGAAAACGTTGTGTAATATATCATTAAAAAAAATAAAGGTC > 1:1094376/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGA > 1:1673180/1‑97 GTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGTTCA > 2:2242768/1‑134 gttcTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAG < 2:43263/129‑1 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAA < 1:194299/134‑1 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAA < 1:462755/134‑1 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCG > 1:187402/2‑86 TTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCACTGAAGCGCGACAAGGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAAATA > 2:2071326/1‑135 CGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGTAATTTTCATAAAAAGTTTCAATGAAGCGCGACAAAGTTGTTTAATATATAATTAAAAAAAATAAAGGTCAAGCTAAAATAATATT > 1:875076/1‑135 CGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAAATATTATT > 2:3475818/1‑135 CTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAAATATTATTTA > 2:581473/1‑134 TTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAAATATTATTTAA < 1:2363458/134‑1 TTTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/81‑221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgactTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAATAAAGGTCAAGCTAAAATATTATTTAAG > AssemblyC74_contig_12/8‑141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |