| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_12 | 59059 = | 208 (0.530) | 640 (1.730) +ATCCTG |
71/242 | 1.2 | 80.0% | coding (279/672 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog |
| ? | AssemblyC74_contig_18 | 27021 = | 127 (0.330) | coding (2179/2232 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 705 total aligned reads displayed.
TATGAATTGGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAATCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_12/59190‑59059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGT‑‑‑T > AssemblyC74_contig_18/27021‑27075 |||||| TATGAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAAT < 1:886293/134‑1 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGACTTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:193059/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:1546544/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:599084/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:531566/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 1:631258/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:2264175/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:2319733/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:321011/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 2:2363255/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTAACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTG > 1:3065751/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCA > 2:1222444/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCA > 2:808866/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCA > 1:2500244/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCA > 2:3074901/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCT < 1:2867672/132‑1 ttaGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAA > 2:1379214/4‑135 taGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAG < 1:2171151/133‑1 taGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAG < 1:590606/133‑1 taGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAG < 2:2681749/133‑1 gaGATGCGACACCACTCGAGTTTGAGAACGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAG < 2:3400983/133‑1 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGG > 1:476349/1‑132 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGG > 1:259920/1‑132 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGG > 2:36709/1‑132 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAG < 2:1673344/131‑1 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAG < 2:1714474/131‑1 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTAACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAgg > 1:800974/1‑129 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTAACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAgg > 1:3342739/1‑129 GCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGG > 1:2456779/1‑131 CGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTG < 1:1397042/135‑1 CGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTAACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAg < 1:3286844/128‑2 ACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTG < 1:518979/133‑1 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTT > 2:334375/1‑135 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTT > 1:10206/1‑135 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTT < 1:1582322/134‑1 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTT < 2:162450/134‑1 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTT < 2:2912534/134‑1 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGAGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTT < 1:1078983/134‑1 CCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGTAGCTGTTTTT > 1:2379698/1‑135 CCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTT > 2:2630447/1‑135 CCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTT > 1:2033146/1‑135 CCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTT < 1:664211/133‑1 ATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCTGGCGTTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAG < 2:2074675/135‑1 ATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAG < 1:3246853/135‑1 ATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAG < 1:2833755/135‑1 ATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAG < 1:3397692/135‑1 GAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCT > 1:1881734/1‑113 TTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACA < 2:2452399/134‑1 TGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGA > 2:1155998/1‑134 ATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCG < 2:1457709/134‑1 GAAGTCAGACAGCGGTGGTATAATTGACGAACTAAAACCGACTAACACCCGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:1003286/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 1:2648045/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:3150199/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 1:395512/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:274937/135‑1 GAAGACAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCATAGCGGTGTTATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 1:1625556/135‑1 AGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGC > 2:932298/1‑135 AGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGC > 2:2881791/1‑135 AGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCT < 1:2758961/91‑1 GCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA > 1:167708/1‑134 GCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA > 2:1876729/1‑134 GCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA > 1:3442536/1‑134 GTGGTAGATTTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTTCA < 2:1735379/131‑1 GTGGTAGAATTTACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:2336711/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAGCGCTACAAACC < 2:2193419/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:709007/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:252475/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:1530078/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:1373345/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC > 1:3517505/1‑135 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:713004/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:929981/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAA < 1:1836019/132‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA < 2:1574444/131‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA < 1:2109722/131‑1 TGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCG > 2:760169/1‑135 TGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCG > 1:2219517/1‑135 TGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 1:2062626/120‑1 GTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG < 2:34729/134‑1 GTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG < 1:1750919/134‑1 GTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG < 1:760169/134‑1 GTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG < 2:2986438/134‑1 TAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTc > 2:1068116/1‑134 AGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTc < 2:259917/134‑2 GAATTTACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTct > 1:1212476/1‑132 GAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTct > 2:487763/1‑132 AATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTct > 2:650922/1‑131 TTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTctaa < 1:2707678/133‑5 TTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTctaa < 1:3001679/133‑5 GAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTAC > 2:2845882/1‑116 TACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCT > 2:2025840/1‑54 GGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTA > 1:1288080/1‑66 GGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTT > 2:1834200/1‑58 GGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTT < 2:900662/58‑1 GTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG > 1:3168922/1‑97 GTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 1:1952210/81‑1 CGTGTTGACAAAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA > 1:2904908/1‑87 AAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTctaa > 1:1155388/1‑84 AAGATCGATGACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA > 2:3269796/1‑77 ACCAAAGCGGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:447402/71‑1 |||||| TATGAATTGGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAATCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_12/59190‑59059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGT‑‑‑T > AssemblyC74_contig_18/27021‑27075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |