New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_20 = 158620 (0.000)262 (0.290)
+AAAAAAAGATGAACTATTTCTAGTTCATCTTTTTGCCTTT
63/174 0.3 100% intergenic (+12/–) rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15)/–
?AssemblyC74_contig_31 = 3396 0 (0.000)noncoding (118/118 nt) rasttk_feature_creation_tool=RNA_reps_5S_rRNA 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation

Only 100 of 361 total aligned reads displayed.

ACTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_20/15728‑15862
                                                                                                                                      |                                                                                                                                     
 cTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATa                                                                                                                                      >  1:106807‑M1/1‑134 (MQ=255)
 cTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATa                                                                                                                                      >  2:3296270‑M1/1‑134 (MQ=255)
 cTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATa                                                                                                                                      >  1:1412083‑M1/1‑134 (MQ=255)
 cTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATa                                                                                                                                      >  2:3168984‑M1/1‑134 (MQ=255)
 cTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATa                                                                                                                                      >  2:1898962‑M1/1‑134 (MQ=255)
 cTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTGCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATa                                                                                                                                      >  1:3008739‑M1/1‑134 (MQ=255)
  tAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaa                                                                                                                                     >  2:639313‑M1/1‑133 (MQ=255)
    aaGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaa                                                                                                                                   >  2:2105277‑M1/1‑131 (MQ=255)
        aaTAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaag                                                                                                                               >  1:2772103‑M1/1‑127 (MQ=255)
         aTAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaaga                                                                                                                              <  1:747428‑M1/135‑10 (MQ=255)
           aaaaTGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatg                                                                                                                            >  2:2786139‑M1/1‑124 (MQ=255)
           aaaaTGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatg                                                                                                                            >  1:796866‑M1/1‑124 (MQ=255)
            aaaTGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatg                                                                                                                            >  1:3452521‑M1/1‑123 (MQ=255)
             aaTGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGACTCCGTTCTTTAACTTAATCTAAATaataaaagatgaa                                                                                                                          >  2:1610058‑M1/1‑122 (MQ=255)
             aaTGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatg                                                                                                                            >  2:2620644‑M1/1‑122 (MQ=255)
             aaTGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatg                                                                                                                            >  2:3346242‑M1/1‑122 (MQ=255)
                  aaTTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactat                                                                                                                      >  2:2672880‑M1/1‑117 (MQ=255)
                      ttACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttcta                                                                                                                 <  2:1257777‑M1/135‑23 (MQ=255)
                          tAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctaggtc                                                                                                             >  2:307905‑M1/1‑109 (MQ=255)
                               ttttGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaa                                                                                                                                 >  1:953521‑M1/1‑104 (MQ=255)
                               ttttGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaa                                                                                                                                 <  2:953521‑M1/110‑7 (MQ=255)
                                   gattgatAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttg                                                                                                    <  2:2063336‑M1/135‑36 (MQ=255)
                                           gAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcg                                                                                            >  1:1212803‑M1/1‑92 (MQ=255)
                                             aaTGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          <  2:2578772‑M1/135‑46 (MQ=255)
                                              attgcaaAGTAATCGAACGATTTGCACCACAAACGTATCCATTGAATATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          <  2:1937488‑M1/131‑46 (MQ=255)
                                              aTGGCAAAGTAATCGAACGATTTGCACCACACACTTCACCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          <  1:3188616‑M1/134‑46 (MQ=255)
                                              aTGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          <  1:830675‑M1/134‑46 (MQ=255)
                                              aTGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          <  1:1898962‑M1/134‑46 (MQ=255)
                                                   aaaGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgac                                                                                     <  1:1535896‑M1/134‑51 (MQ=255)
                                                    aaGTAATCGAACGATTTGCACCACAAACTACTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacg                                                                                    <  2:1975530‑M1/134‑52 (MQ=255)
                                                     aGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtc                                                                                  <  2:796866‑M1/135‑54 (MQ=255)
                                                       tAATCTTACGATTTGCACCACAATATTATAAATTTAAAATGACCGCTGCTATTGAATCCGTTCTTTAACTTAATAATAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcct                                                                                <  2:498760‑M1/135‑56 (MQ=255)
                                                             aaCGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctc                                                                          <  2:3452521‑M1/135‑62 (MQ=255)
                                                             aaCGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctc                                                                          <  2:519121‑M1/135‑62 (MQ=255)
                                                             aaCGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgactttgcgtggcgacgtcctactc                                                                            >  1:2339364‑M1/1‑74 (MQ=255)
                                                             aaCGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatc                                                                                                          >  1:3049569‑M1/1‑74 (MQ=255)
                                                               cGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctca                                                                         <  1:3166242‑M1/134‑63 (MQ=255)
                                                                  tttGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaag                                                                     >  2:1364606‑M1/1‑69 (MQ=255)
                                                                   ttGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaagg                                                                    <  1:2516075‑M1/135‑68 (MQ=255)
                                                                   ttGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaagg                                                                    <  2:2993014‑M1/135‑68 (MQ=255)
                                                                   ttGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaag                                                                     <  1:17421‑M1/134‑67 (MQ=255)
                                                                   ttGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaag                                                                     <  1:2105277‑M1/134‑67 (MQ=255)
                                                                    tGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaagg                                                                    >  2:3391897‑M1/1‑67 (MQ=255)
                                                                     gCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaagggg                                                                  <  1:2734871‑M1/135‑70 (MQ=255)
                                                                       accacAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          <  1:296121‑M1/109‑46 (MQ=255)
                                                                        acacaaACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgaagtcctactctcacaaggggcaa                                                               <  2:1766104‑M1/134‑73 (MQ=255)
                                                                              aCTTCTCCATTGAAAATGACCTCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaaga                                                                                                                              >  2:1662906‑M1/1‑57 (MQ=255)
                                                                              aCTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctc                                                         <  1:1045063‑M1/135‑79 (MQ=255)
                                                                              aCTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccct                                                          >  2:1167578‑M1/1‑57 (MQ=255)
                                                                              aCTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaa                                                               >  1:3388479‑M1/1‑57 (MQ=255)
                                                                              aCTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaagggg                                                                  <  2:1707065‑M1/126‑70 (MQ=255)
                                                                              aCTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaa                                                                                                                                <  2:3267662‑M1/64‑8 (MQ=255)
                                                                                   tcCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactac                                                    <  2:2886913‑M1/135‑84 (MQ=255)
                                                                                   tcCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctag                                                                                                                <  1:3302846‑M1/75‑24 (MQ=255)
                                                                                      aTTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          >  2:174095‑M1/1‑49 (MQ=255)
                                                                                      aTTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtg                                                                                          <  1:1166336‑M1/94‑46 (MQ=255)
                                                                                      aTTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcg                                                                                            <  2:666668‑M1/92‑44 (MQ=255)
                                                                                      aTTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcg                                                                                            >  1:666637‑M1/1‑49 (MQ=255)
                                                                                        tGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatgtctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatc                                                >  2:2748966‑M1/1‑47 (MQ=255)
                                                                                             aTGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgct                                          >  2:3131478‑M1/1‑42 (MQ=255)
                                                                                                    cTGCAATTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatc                                                                                                          >  1:368447‑M1/1‑35 (MQ=255)
                                                                                                         aTTGAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaa                               <  1:2264706‑M1/134‑105 (MQ=255)
                                                                                                            gAATCCGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaac                              >  1:598118‑M1/1‑27 (MQ=255)
                                                                                                                 cGTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtg                       >  2:555697‑M1/1‑22 (MQ=255)
                                                                                                                  gTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgtt                     >  1:2411093‑M1/1‑21 (MQ=255)
                                                                                                                  gTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgtt                     >  1:2137081‑M1/1‑21 (MQ=255)
                                                                                                                  gTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgtt                     >  2:2532544‑M1/1‑21 (MQ=255)
                                                                                                                  gTTCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaaccc                                                            >  1:517165‑M1/1‑21 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  1:3231228‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  1:1663655‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  1:3484346‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  2:2318255‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  1:3319551‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  2:3220880‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  2:879970‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  2:1212803‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  1:995604‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcggggcgacgtcctacactcacaaggggcaacccctcactacaagcggcgctaagaagcttaacttctgtgttc                    <  2:703210‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgccttggcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  2:2440454‑M1/135‑116 (MQ=255)
                                                                                                                   ttCTTTAACTTAATAAAAATaaaaaaagatgaactatttctagctcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    <  1:2554346‑M1/135‑116 (MQ=255)
                                                                                                                     cattaaCTTAATAAAATTaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacacggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcgg                  <  2:2359677‑M1/133‑118 (MQ=255)
                                                                                                                     cTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcgg                  <  2:1073620‑M1/135‑118 (MQ=255)
                                                                                                                     cTTTAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcg                   <  1:437567‑M1/134‑117 (MQ=255)
                                                                                                                      tttAACTTAATAAAAATaaaaaaagatgaactatttctagtacatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgagttcggc                 >  1:1973479‑M1/1‑17 (MQ=255)
                                                                                                                       ttAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggca                >  1:1363457‑M1/1‑16 (MQ=255)
                                                                                                                        tAACTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcat               <  2:362468‑M1/135‑121 (MQ=255)
                                                                                                                          aCTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatgg             <  1:2479388‑M1/135‑123 (MQ=255)
                                                                                                                          aCTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatgg             <  1:171198‑M1/135‑123 (MQ=255)
                                                                                                                          aCTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatgg             <  1:2210855‑M1/135‑123 (MQ=255)
                                                                                                                          aCTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatgg             <  2:1412083‑M1/135‑123 (MQ=255)
                                                                                                                          aCTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatgg             <  1:91726‑M1/135‑123 (MQ=255)
                                                                                                                          aCTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatgg             <  1:3129464‑M1/135‑123 (MQ=255)
                                                                                                                           cTTAATAAAAATaaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatggt            >  1:2063564‑M1/1‑12 (MQ=255)
                                                                                                                              aataaaaataaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatggttac         <  2:2137081‑M1/135‑127 (MQ=255)
                                                                                                                                 aaaaataaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatggttacagg      >  2:1538689‑M1/1‑6 (MQ=255)
                                                                                                                                 aaaaataaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatgg             <  1:2871260‑M1/128‑123 (MQ=255)
                                                                                                                                 aaaaataaaaaaagatgaactatttctagttcatctttttacctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatggttacagg      >  2:2236521‑M1/1‑6 (MQ=255)
                                                                                                                                   aaataaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatggttacaggtg    >  2:2197777‑M1/1‑4 (MQ=255)
                                                                                                                                   aaataaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttc                    >  2:435743‑M1/1‑4 (MQ=255)
                                                                                                                                     ataaaaaaagatgaactatttctagttcatctttttgcctttgcgtggcgacgtcctactctcacaaggggcaacccctcactacaatcggcgctaagaagcttaacttctgtgttcggcatggttacaggtgta  <  1:2659687‑M1/135‑134 (MQ=255)
                                                                                                                                      |                                                                                                                                     
ACTAAAGCAATAAAATGGAATTTTACTAAATTTTTGATTGATAGAAATGGCAAAGTAATCGAACGATTTGCACCACAAACTTCTCCATTGAAAATGACCGCTGCAATTGAATCCGTTCTTTAACTTAATAAAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_20/15728‑15862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.