New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_37 = 17500 (0.000)265 (0.660)
+AAAAAGT
79/240 1.0 100% intergenic (‑2/–) rasttk_feature_annotation_tool=annotate_proteins_si milarity/– FIG00632365: hypothetical protein/–
?AssemblyC74_contig_62 1 = 0 (0.000)intergenic (–/‑1) –/rasttk_feature_annotation_tool=annotate_proteins_si milarity –/Mobile element protein

Only 100 of 531 total aligned reads displayed.

GAACGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_37/1616‑1750
                                                                                                                                      |                                                                                                                                      
gAACGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCa                                                                                                                                        <  2:1980848/135‑1 (MQ=255)
gAACGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCa                                                                                                                                        >  1:77489/1‑135 (MQ=255)
gAACGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCa                                                                                                                                        >  1:3272946/1‑135 (MQ=255)
   cGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCa                                                                                                                                        >  2:2508431/1‑132 (MQ=255)
   cGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAta                                                                                                                                      <  1:2784923‑M2/134‑3 (MQ=255)
   cGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAta                                                                                                                                      <  1:2042645‑M2/134‑3 (MQ=255)
   cGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaa                                                                                                                                     >  2:417444‑M1/1‑132 (MQ=255)
   cGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaa                                                                                                                                     >  1:2073156‑M1/1‑132 (MQ=255)
   cGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaa                                                                                                                                     >  2:276132‑M1/1‑132 (MQ=255)
    gATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaa                                                                                                                                    >  2:336193‑M1/1‑131 (MQ=255)
    gATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaa                                                                                                                                    >  2:2427187‑M1/1‑131 (MQ=255)
        ggATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgt                                                                                                                                 <  1:3330550‑M2/134‑8 (MQ=255)
        ggATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtc                                                                                                                                >  2:1351035‑M1/1‑127 (MQ=255)
        ggATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtc                                                                                                                                >  1:1842985‑M1/1‑127 (MQ=255)
        ggATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtc                                                                                                                                >  2:1210739‑M1/1‑127 (MQ=255)
        ggATACTTTTCTCTAAACAAATCTAATTCTTTCACAACGTCATTAAATAAGTCCTGTTTATCTTCTTTCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtc                                                                                                                                >  1:2508754‑M2/1‑127 (MQ=255)
              ttttCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttc                                                                                                                          <  1:2221048‑M1/135‑15 (MQ=255)
                   tctAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagata                                                                                                                     >  2:2178693‑M1/1‑116 (MQ=255)
                          aaaTCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaa                                                                                                               <  1:978368‑M2/134‑26 (MQ=255)
                          aaaTCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaa                                                                                                               <  2:3311001‑M2/134‑26 (MQ=255)
                            aTCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaac                                                                                                            >  1:415622‑M2/1‑107 (MQ=255)
                               tAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTATCAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactct                                                                                                         <  2:1276180‑M2/135‑32 (MQ=255)
                                 aTTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcg                                                                                                       >  1:1284428‑M2/1‑102 (MQ=255)
                                   tCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcag                                                                                                     <  2:592850‑M1/135‑36 (MQ=255)
                                    cTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCa                                                                                                                                        >  2:919048/1‑99 (MQ=255)
                                     tttCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagt                                                                                                   >  1:10066‑M2/1‑98 (MQ=255)
                                      ttCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtc                                                                                                  >  2:2042645‑M2/1‑97 (MQ=255)
                                      ttCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtc                                                                                                  >  2:88613‑M2/1‑97 (MQ=255)
                                                    aaaTAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagt                                                                                    >  2:1163659‑M2/1‑83 (MQ=255)
                                                      aTAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcg                                                                                  >  2:1048872‑M2/1‑81 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattt                                                                           <  2:2223369‑M2/135‑62 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattt                                                                           >  1:1982019‑M2/1‑74 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaat                                                                             >  1:2464669‑M2/1‑74 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtc                                                                                                                                <  2:2919012‑M2/82‑9 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtc                                                                                                                                >  1:2919012‑M2/1‑74 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaa                                                                           >  2:2381471‑M1/1‑74 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaa                                                                           >  1:2113156‑M1/1‑74 (MQ=255)
                                                             cTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattcta                                                                            <  1:914752‑M1/134‑61 (MQ=255)
                                                              tGTTTATCTTCTTGCGTCAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaatttt                                                                          >  1:1600082‑M2/1‑73 (MQ=255)
                                                              tGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaatttt                                                                          <  2:1991838‑M2/135‑63 (MQ=255)
                                                              tGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaatttt                                                                          >  1:1633649‑M2/1‑73 (MQ=255)
                                                              tGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaatttt                                                                          >  1:1467497‑M2/1‑73 (MQ=255)
                                                                tttATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaa                                                                        >  2:3272946‑M2/1‑71 (MQ=255)
                                                                tttATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaa                                                                        >  1:2676166‑M2/1‑71 (MQ=255)
                                                                tttATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgc                                                                        <  1:3118080‑M1/135‑65 (MQ=255)
                                                                  tATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatga                                                                                                                  <  2:1094846‑M1/91‑23 (MQ=255)
                                                                       tcttGCGTAAGTTTTTGATTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataatgtcgacaattttaaagggtgc                                                                 >  1:1530140‑M2/1‑64 (MQ=255)
                                                                       tcttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgc                                                                 >  1:1756639‑M2/1‑64 (MQ=255)
                                                                       tcttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaatta                                                                 <  1:3173269‑M1/135‑72 (MQ=255)
                                                                        cttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgct                                                                <  1:1219654‑M2/135‑73 (MQ=255)
                                                                        cttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgct                                                                >  2:755293‑M2/1‑63 (MQ=255)
                                                                        cttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgct                                                                <  2:153576‑M2/135‑73 (MQ=255)
                                                                        cttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaatttt                                                                          <  2:1308386‑M2/125‑63 (MQ=255)
                                                                        cttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattag                                                                <  1:85253‑M1/135‑73 (MQ=255)
                                                                        cttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattag                                                                >  1:3013261‑M1/1‑63 (MQ=255)
                                                                        cttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaag                                                                                                             >  2:3157754‑M1/1‑63 (MQ=255)
                                                                         ttGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattaga                                                               <  2:661039‑M1/135‑74 (MQ=255)
                                                                          tGCGTTAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagag                                                              <  1:2958470‑M1/135‑75 (MQ=255)
                                                                          tGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagag                                                              <  1:2733150‑M1/135‑75 (MQ=255)
                                                                             gTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtg                                                           <  1:2328657‑M2/135‑78 (MQ=255)
                                                                             gTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtg                                                           <  1:13399‑M2/135‑78 (MQ=255)
                                                                             gTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagt                                                                                    >  1:2375974‑M2/1‑58 (MQ=255)
                                                                             gTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagaga                                                             >  1:2556951‑M1/1‑58 (MQ=255)
                                                                             gTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattaga                                                               <  1:2598376‑M1/131‑74 (MQ=255)
                                                                                 ggTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttc                                                       <  2:1711862‑M1/135‑82 (MQ=255)
                                                                                 ggTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatctt                                                        >  2:1580951‑M1/1‑54 (MQ=255)
                                                                                   ttttGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcac                                                     <  2:1829091‑M1/135‑84 (MQ=255)
                                                                                    tttGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcac                                                     <  2:1113985‑M1/134‑84 (MQ=255)
                                                                                    tttGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcac                                                     <  2:2805124‑M1/134‑84 (MQ=255)
                                                                                         ttGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaacttt                                                <  1:2257238‑M2/134‑89 (MQ=255)
                                                                                         ttGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgc                                                                 <  1:1148342‑M2/117‑72 (MQ=255)
                                                                                               tATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaac                                         >  2:2328657‑M2/1‑40 (MQ=255)
                                                                                               tATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaac                                         <  1:1393704‑M2/135‑96 (MQ=255)
                                                                                               tATTCATCCAATGCTTACCTTAACATTTCATCTCTTGTCAtattattctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaac                                         <  2:352107‑M2/135‑96 (MQ=255)
                                                                                                aTTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaa                                        >  2:697472‑M1/1‑39 (MQ=255)
                                                                                                     tCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctg                                   >  2:2698606‑M2/1‑34 (MQ=255)
                                                                                                     tCCAATGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctg                                   <  2:855729‑M2/135‑102 (MQ=255)
                                                                                                         aTGCTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactc                                                                                                          >  1:1056723‑M2/1‑30 (MQ=255)
                                                                                                         aTGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaac                               >  1:797870‑M1/1‑30 (MQ=255)
                                                                                                         aTGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaac                               >  1:1570364‑M1/1‑30 (MQ=255)
                                                                                                         aTGCTTTCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttagaaaaagtattctaacgcataattagagaatcttcacacacatatcaaaacgttaaaac                               <  1:1706279‑M1/135‑106 (MQ=255)
                                                                                                            cTTTCCTTCACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctgattggtg                            <  2:2562418‑M2/135‑109 (MQ=255)
                                                                                                            cTTTCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctgattggt                             <  1:3388859‑M2/134‑108 (MQ=255)
                                                                                                              ttCCTTAACAATTCATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctgattggtgc                           <  2:2994663‑M2/134‑110 (MQ=255)
                                                                                                               tCCTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattg                         <  1:1096130‑M1/135‑112 (MQ=255)
                                                                                                                 cTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgct                       >  1:643640‑M1/1‑22 (MQ=255)
                                                                                                                 cTTAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgct                       >  1:2752899‑M1/1‑22 (MQ=255)
                                                                                                                  ttAACAATTCATCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattaga                                                               <  2:79385‑M1/94‑74 (MQ=255)
                                                                                                                  ttAACAATTCATATCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctgattgttgcacc                        <  2:2640405‑M2/133‑113 (MQ=255)
                                                                                                                           cATCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctgattggtgcaccaactttttttg             >  2:3388859‑M2/1‑12 (MQ=255)
                                                                                                                            aTCTCTTGTCAtattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctgattggtgcaccaactttttttg             <  1:3063398‑M2/134‑124 (MQ=255)
                                                                                                                            aTCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgcttattgatttcg            >  2:1406862‑M1/1‑11 (MQ=255)
                                                                                                                            aTCTCTTGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattaga                                                               >  2:2081456‑M1/1‑11 (MQ=255)
                                                                                                                                 ttGTCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgcttatggatttcgcagt        >  2:2296040‑M1/1‑6 (MQ=255)
                                                                                                                                    tCAaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgcttatggatttcgcagtttc     >  2:461372‑M1/1‑3 (MQ=255)
                                                                                                                                    tCAaaaaagtctttttcagatatgaaaaaggaattca                                                                                                      >  2:1768846‑M1/1‑3 (MQ=255)
                                                                                                                                      atattcgtctcatacttctctactaaaactctcgaagtcgcatttaataaagtcgacaattttaaagggtgcttagtggaataaactttatcaaactttctgattggtgcaccaactttttttgttcttcccttc  >  1:522465‑M2/1‑1 (MQ=255)
                                                                                                                                      aaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgcttatggatttcgcagtttcacc  >  1:485985‑M1/1‑1 (MQ=255)
                                                                                                                                      aaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgcttatggatttcgcagtttcacc  >  2:531230‑M1/1‑1 (MQ=255)
                                                                                                                                      aaaaaagtctttttcagatatgaaaaaggaattcagctagcgttttcgaaaaagtattctaacgcaaaattagagaatcttcacacacatatcaaaacgttaaaacgaattgcttatggatttcgcagtttcacc  >  1:2405312‑M1/1‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                      
GAACGATGGGATACTTTTCTCTAAACAAATCTAATTCTTTCACCACGTCATTAAATAAGTCCTGTTTATCTTCTTGCGTAAGGTTTTGCTTGATGTATTCATCCAATGCTTTCCTTAACAATTCATCTCTTGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_37/1616‑1750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.