New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_62 = 3910 (0.000)241 (0.590) 71/254 0.3 100% intergenic (+213/–) rasttk_feature_annotation_tool=annotate_proteins_si milarity/– Mobile element protein/–
?AssemblyC74_contig_64 = 352 0 (0.000)intergenic (+1/–) rasttk_feature_annotation_tool=elepa@bvbrc/– hypothetical protein/–

Only 100 of 262 total aligned reads displayed.

ATTATAGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_62/257‑391
                                                                                                                                      |                                                                                                                                  
tttATTGTTGCTACTATTTTTGAATATAGAACTTAGCGACATACTTAATATGCCGCTAATTCATTTTAATAAGGTATATCCAAATCAGTTACTTTGCGTTAATTGGAACAGCTGCTGGTTTAATCTCGGCATGCt                                                                                                                                    <  1:1358863/134‑1 (MQ=255)
attattGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    <  1:3331631/135‑1 (MQ=255)
aTTATAGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    <  1:788407/135‑1 (MQ=255)
aTTATAGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    <  2:1426458/135‑1 (MQ=255)
aTTATAGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    <  2:1969292/135‑1 (MQ=255)
aTTATAGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    <  1:188396/135‑1 (MQ=255)
aTTATAGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    <  2:1746548/135‑1 (MQ=255)
  tataGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTct                                                                                                                                  <  1:2718349‑M1/135‑3 (MQ=255)
  tataGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTct                                                                                                                                  <  1:1801990‑M1/135‑3 (MQ=255)
  tataGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTct                                                                                                                                  <  2:3330600‑M1/135‑3 (MQ=255)
  tataGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTct                                                                                                                                  <  1:3129707‑M1/135‑3 (MQ=255)
  tataGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTct                                                                                                                                  <  1:1301245‑M1/135‑3 (MQ=255)
  tataGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTct                                                                                                                                  <  1:649565‑M1/135‑3 (MQ=255)
        tGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    >  1:2410519/1‑127 (MQ=255)
        tGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    <  2:2410519/127‑1 (MQ=255)
         gCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggt                                                                                                                             <  2:3082319‑M1/133‑8 (MQ=255)
         gCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggt                                                                                                                             <  2:1825694‑M1/133‑8 (MQ=255)
         gCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggt                                                                                                                             <  2:715815‑M1/133‑8 (MQ=255)
            actaATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtataca                                                                                                                        <  1:3376692‑M1/135‑13 (MQ=255)
            actaATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtataca                                                                                                                        >  2:2827724‑M1/1‑123 (MQ=255)
            actaATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatac                                                                                                                         <  2:394211‑M1/134‑12 (MQ=255)
            actaATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggt                                                                                                                             <  2:894185‑M1/130‑8 (MQ=255)
             ctaATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacac                                                                                                                       >  2:3229585‑M1/1‑122 (MQ=255)
                   ttGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactat                                                                                                                 <  1:196951‑M1/135‑20 (MQ=255)
                           aGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactt                                                                                                         <  2:214273‑M1/135‑28 (MQ=255)
                              aaTTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgacttt                                                                                                        >  2:3289408‑M1/1‑105 (MQ=255)
                               aTTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgacttt                                                                                                        >  2:1076870‑M1/1‑104 (MQ=255)
                                ttAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatct                                                                                                    <  1:1260116‑M1/135‑33 (MQ=255)
                                     gACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggt                                                                                                                             <  2:1452520‑M1/105‑8 (MQ=255)
                                      aCATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaa                                                                                               <  1:1068988‑M1/134‑38 (MQ=255)
                                              aaTATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaaccc                                                                                      <  2:1021874‑M1/135‑47 (MQ=255)
                                                tattgcgctatTTCTTTTTTTTATGGTATATCGAAATCAGTTAGTTTGCGTTATTTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcatttttaacccac                                                                                    <  2:168107‑M1/130‑49 (MQ=255)
                                                 atGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccac                                                                                    >  2:3485539‑M1/1‑86 (MQ=255)
                                                      gCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               <  1:1392889‑M1/134‑54 (MQ=255)
                                                      gCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               <  1:61781‑M1/134‑54 (MQ=255)
                                                      gCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               <  2:121306‑M1/134‑54 (MQ=255)
                                                      gCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               <  1:1582985‑M1/134‑54 (MQ=255)
                                                      gCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               <  1:1187968‑M1/134‑54 (MQ=255)
                                                      gCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               >  2:1392889‑M1/1‑81 (MQ=255)
                                                        tAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccaca                                                                            >  1:2344097‑M1/1‑79 (MQ=255)
                                                        tAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccaca                                                                            >  2:1805171‑M1/1‑79 (MQ=255)
                                                        tAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccaca                                                                            >  2:2058067‑M1/1‑79 (MQ=255)
                                                        tAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccaca                                                                            >  2:2369780‑M1/1‑79 (MQ=255)
                                                        tAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccac                                                                                    <  1:1005010‑M1/127‑49 (MQ=255)
                                                        tAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccac                                                                                    >  2:1005010‑M1/1‑79 (MQ=255)
                                                         aaTTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacat                                                                           >  2:45502‑M1/1‑78 (MQ=255)
                                                         aaTTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacat                                                                           >  2:3352219‑M1/1‑78 (MQ=255)
                                                         aaTTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacat                                                                           >  2:1206960‑M1/1‑78 (MQ=255)
                                                          aTTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacata                                                                          <  2:348334‑M1/135‑59 (MQ=255)
                                                            tCATGTTAATAATGTATTTCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTTATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataat                                                                        <  2:2574347‑M1/135‑61 (MQ=255)
                                                                  taataaGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtataca                                                                                                                        <  1:181041‑M1/81‑13 (MQ=255)
                                                                     taaGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacg                                                               <  1:1320841‑M1/135‑70 (MQ=255)
                                                                                 aaaaCAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCCTGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttca                                                   >  2:3514249‑M1/1‑54 (MQ=255)
                                                                                  aaaCAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcag                                                  <  1:3254877‑M1/135‑83 (MQ=255)
                                                                                      aGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCt                                                                                                                                    >  2:1885259/1‑49 (MQ=255)
                                                                                      aGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatc                                               >  2:2278435‑M1/1‑49 (MQ=255)
                                                                                      aGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatc                                               >  2:1854173‑M1/1‑49 (MQ=255)
                                                                                      aGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagat                                                >  2:655375‑M1/1‑49 (MQ=255)
                                                                                      aGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataat                                                                        >  2:1302532‑M1/1‑49 (MQ=255)
                                                                                          aCTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctc                                            <  1:112726‑M1/133‑89 (MQ=255)
                                                                                          aCTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctc                                            <  2:1294948‑M1/133‑89 (MQ=255)
                                                                                          aCTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcc                                              <  1:165968‑M1/131‑87 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcact                                         >  2:2964045‑M1/1‑44 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcact                                         >  1:2100038‑M1/1‑44 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcact                                         >  2:2329665‑M1/1‑44 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcact                                         >  1:2991625‑M1/1‑44 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcact                                         >  1:908000‑M1/1‑44 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgttttt                                                     <  1:3492422‑M1/123‑80 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               >  1:1009563‑M1/1‑44 (MQ=255)
                                                                                           cTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTct                                                                                                                                  <  1:1435333‑M1/46‑3 (MQ=255)
                                                                                               gCGTTAATTGGAACAGCTGCTCGTGTAATCTCGTCATGCTatgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactagga                                     <  1:3161602‑M1/135‑96 (MQ=255)
                                                                                               gCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactagga                                     <  1:720801‑M1/135‑96 (MQ=255)
                                                                                               gCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactagga                                     <  2:766055‑M1/135‑96 (MQ=255)
                                                                                               gCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactagga                                     <  1:1244713‑M1/135‑96 (MQ=255)
                                                                                               gCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactagga                                     <  1:2964045‑M1/135‑96 (MQ=255)
                                                                                               gCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactacga                                     <  2:2679954‑M1/135‑96 (MQ=255)
                                                                                                   tAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacga                                 >  2:754111‑M1/1‑36 (MQ=255)
                                                                                                   tAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatct                                                                                                    <  1:2092401‑M1/68‑33 (MQ=255)
                                                                                                    aaTTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgat                                <  1:2827724‑M1/135‑101 (MQ=255)
                                                                                                    aaTTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgat                                <  2:580664‑M1/135‑101 (MQ=255)
                                                                                                    aaTTGGAACAGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgat                                <  2:3392398‑M1/135‑101 (MQ=255)
                                                                                                             aGCTGCTCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtac                       >  2:1639692‑M1/1‑26 (MQ=255)
                                                                                                                 gctCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttgg                   <  1:3289408‑M1/135‑114 (MQ=255)
                                                                                                                 gctCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactatatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttgg                   <  2:2478531‑M1/135‑114 (MQ=255)
                                                                                                                  ctCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggc                  >  2:3027396‑M1/1‑21 (MQ=255)
                                                                                                                  ctCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggc                  >  2:187359‑M1/1‑21 (MQ=255)
                                                                                                                  ctCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgat                                <  2:1581078‑M1/121‑101 (MQ=255)
                                                                                                                  ctCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactagga                                     <  1:344641‑M1/116‑96 (MQ=255)
                                                                                                                  ctCGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttccc                                                                               >  2:2037993‑M1/1‑21 (MQ=255)
                                                                                                                    cGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggcc                 <  1:2534909‑M1/134‑116 (MQ=255)
                                                                                                                    cGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggcc                 <  1:3167435‑M1/134‑116 (MQ=255)
                                                                                                                    cGTGTAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggcc                 <  1:3485520‑M1/134‑116 (MQ=255)
                                                                                                                       gtAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaa                                    <  2:150516‑M1/112‑97 (MQ=255)
                                                                                                                       gtAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaa                                    >  1:150494‑M1/1‑16 (MQ=255)
                                                                                                                        tAATCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggccattga            <  1:2058067‑M1/135‑121 (MQ=255)
                                                                                                                          aTCTCGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggccattgat           >  2:3019306‑M1/1‑13 (MQ=255)
                                                                                                                             tcGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccccgtcccacataatattggaacgtaccgtttgtcagatcctcactaggaacgatggcttgtacttggccattgatttct       <  2:2803793‑M1/135‑126 (MQ=255)
                                                                                                                             tcGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggccattgatttct       <  1:754111‑M1/135‑126 (MQ=255)
                                                                                                                             tcGGCATGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttggccattgatttct       <  1:1992242‑M1/135‑126 (MQ=255)
                                                                                                                                  aTGCTctgcggtatacaatactatttcgactttatctgtcaattttaacccacttcccacataatattggaacgtaccgtttttcagatcctcactaggaacgatggcttgtacttgaccattgatttctactcc  >  1:3540449‑M1/1‑5 (MQ=255)
                                                                                                                                      |                                                                                                                                  
ATTATAGTTGCTACTAATTTTGAATATAGAAATTAGCGACATACTTAATATGCCGCTAATTCATGTTAATAAGGTATATCCAAAACAGTTACTTTGCGTTAATTGGAACAGCTGCTCGTGTAATCTCGGCATGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_62/257‑391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.