| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_20 | 1 = | 0 (0.000) | 339 (0.660) | 80/254 | 0.5 | 100% | intergenic (–/+131) | –/rasttk_feature_annotation_tool=annotate_proteins_si milarity | –/Mobile element protein |
| ? | AssemblyC74_contig_57 | = 493 | 0 (0.000) | coding (1/492 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein | |||||
Only 100 of 605 total aligned reads displayed.
TACAATTTCTTTTGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_57/360‑493 | tttGACGTATAATGCCTTTGGCATCCATTGCATGGTATTTAATTTCTGTTTTATCCTTCGTTTTTTTATGATGGCAGATACTGTTGTATAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctc > 1:979886‑M2/1‑124 (MQ=255) tttGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctc > 1:2789864‑M2/1‑124 (MQ=255) tttGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGCGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctc > 2:1014933‑M2/1‑124 (MQ=255) tttGACGGATAATGCCTTTGGAATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctc > 2:707648‑M2/1‑124 (MQ=255) tttGACGGATAATGCCCTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctc > 1:329071‑M2/1‑124 (MQ=255) ttGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcg < 1:598945‑M2/135‑13 (MQ=255) tGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcga < 2:1817704‑M2/135‑14 (MQ=255) gACGGATAATGCCTTTGGCATCCACTTCTGGGTATTTAATTTCTGTGTTATCCGACGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgat > 2:944521‑M2/1‑121 (MQ=255) ccTTTTTCATCCAATTCATGGTATTTAATTTCTGTTGTATCAGTCGTGATTTTCTGTTGGCTGATACTGTTGTAGAAACGACGATGGATCCGATTTTGGGCTACTGCTCCgacttgtcctcgataagaattgtag > 2:1048525‑M2/1‑110 (MQ=255) ccTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtag > 2:2391499‑M2/1‑110 (MQ=255) tttGGCATCCACTTCATGTTATTTAAATTCAGTTGTATCCGTCGTTATTTACTGATGGCTTATACTGGTGTATAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcg > 1:1799643‑M2/1‑108 (MQ=255) tttGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcg > 2:2068221‑M2/1‑108 (MQ=255) tttGGAATCCACTTCTTGTTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGAGGGAATATACTGGTTTATAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcg > 1:2261411‑M2/1‑108 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtg < 2:2650011‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtg < 1:1772848‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 1:491293‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 1:643569‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 2:2565867‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 2:1643047‑M2/135‑33 (MQ=255) cATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtg < 2:2165944‑M2/135‑33 (MQ=255) aTCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtg > 2:2870439‑M2/1‑102 (MQ=255) aTCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttgtcctcgataagaattgtagcgacgtga < 1:1705440‑M2/135‑34 (MQ=255) tCCACTTCATGGTATTTAAATTCTGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgat > 1:1039284‑M2/1‑101 (MQ=255) cACTTCATGGTATTTAAATTCTGTTTTATCGGTGTTGATTTTCTTTGGGCCGATACGGGTGTAGAAACGACGATGGATCCGATTTTTGGATACTGCTCCaacttttcctcgataagaattgtagcgacgtgattt > 1:756572‑M2/1‑99 (MQ=255) cACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCTATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgattt > 2:3312560‑M2/1‑99 (MQ=255) aacTTCATGTTATTTAAATTCATTTGTATCCGTCGTTTTTTTCTTATGGCTGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgattt > 2:826880‑M2/2‑99 (MQ=255) cTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttac < 1:1869749‑M2/135‑39 (MQ=255) cTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcg > 1:3059727‑M2/1‑97 (MQ=255) ttCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacg < 1:2706954‑M2/135‑40 (MQ=255) ttCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacg < 1:34542‑M2/135‑40 (MQ=255) ttCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacg < 1:3514237‑M2/135‑40 (MQ=255) ttCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacg < 1:1249425‑M2/135‑40 (MQ=255) tttACCTTCAGTTGTATCCGTCGTGTTTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaatggtagcgacgtgatttacgcgtgtatgc > 2:3811‑M2/1‑87 (MQ=255) tttAAATTCTTTTGTATCCGTCGTTATTTTCTGTTGGTTGTTACTGGTTTTGATACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgttaagaattgtagcgccgtgatttacgtgtgtatgt > 1:3023197‑M2/1‑87 (MQ=255) tttAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgc > 1:1643047‑M2/1‑87 (MQ=255) tAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccg < 2:2802214‑M2/135‑51 (MQ=255) aaaTTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgat > 2:2299680‑M2/1‑84 (MQ=255) gTATCCGTTGTTATTTTCTGATGGCTTATACTGGTTTAGAAACGACGATGGATCCGTTTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttatt > 1:3331493‑M2/1‑74 (MQ=255) gTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttat < 1:1080078‑M2/134‑61 (MQ=255) ccGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcct < 2:1715268‑M2/134‑65 (MQ=255) tcgtTATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagct > 2:1351200‑M2/1‑67 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttctt < 2:2697877‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttctt < 1:154616‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttctt < 1:2018556‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgt > 2:1175022‑M2/1‑63 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 2:3198560‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 1:2072499‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 2:2474522‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttctt < 2:788165‑M2/135‑73 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgat > 1:456980‑M2/1‑63 (MQ=255) gATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaat > 2:3138934‑M2/1‑63 (MQ=255) aTTTTCTGTTGGCATATACGGGTTTATAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttg > 1:3126331‑M2/1‑62 (MQ=255) aTTTTCTGATGGCAGATACTGGTGTATAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttg > 1:2560915‑M2/1‑62 (MQ=255) aTTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctagataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttg > 2:668713‑M2/1‑62 (MQ=255) aTTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttg > 2:2211450‑M2/1‑62 (MQ=255) ttCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatc < 1:524911‑M2/135‑77 (MQ=255) aTGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcagg < 2:1923711‑M2/133‑80 (MQ=255) cTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttatt < 1:2980243‑M2/105‑62 (MQ=255) ttgtaTAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttcttt > 2:3058274‑M2/2‑41 (MQ=255) gtAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttt > 2:524886‑M2/1‑39 (MQ=255) tttaaaagacGATGGATCAGATTTTTGGCTACTGCTCCgacttgtaatctatatgatttgtagcggcgtgatttacgtgtttatgtcgttacttttattcatagcttcttgatcaggcgctgaactttcttttt > 1:2748469‑M2/4‑38 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttcttttta < 2:1786586‑M2/135‑98 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttcttttt > 2:1756069‑M2/1‑38 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttcttttta < 1:2642877‑M2/135‑98 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttcttttta < 2:62900‑M2/135‑98 (MQ=255) tAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttg > 1:21120‑M2/1‑38 (MQ=255) aGAAACGACGATGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattc < 2:3522994‑M2/99‑63 (MQ=255) aaaCGACGATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattg < 2:3459863‑M2/135‑101 (MQ=255) acgacgATGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgat < 1:3373395‑M2/135‑103 (MQ=255) cgacgaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgata < 2:3346330‑M2/135‑104 (MQ=255) cgacgaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttg < 1:1007823‑M2/105‑74 (MQ=255) gacgaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatag > 2:154616‑M2/1‑31 (MQ=255) acgaTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgataga < 1:1393215‑M2/135‑106 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagag < 1:1338149‑M2/134‑107 (MQ=255) gaTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagag < 2:2971241‑M2/134‑107 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagaga < 1:883550‑M2/134‑108 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctg < 2:2741782‑M2/111‑85 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttg < 2:2004697‑M2/100‑74 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagaga < 1:2587360‑M2/134‑108 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagaga < 1:370323‑M2/134‑108 (MQ=255) aTGGATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtaggccgtgacttttattcctagcttcttgatcacgcgctgaactttctttttattgatagaga < 2:1114279‑M2/134‑108 (MQ=255) ggATCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaac > 2:489200‑M2/1‑25 (MQ=255) ggATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaac < 1:143154‑M2/135‑111 (MQ=255) ggATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaac > 1:2802214‑M2/1‑25 (MQ=255) ggATCCGATTTTTGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaa > 1:2195506‑M2/1‑25 (MQ=255) tCCGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccg > 1:2339113‑M2/1‑22 (MQ=255) ccGATTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcg > 2:1421923‑M2/1‑21 (MQ=255) aTTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtt > 1:687548‑M2/1‑18 (MQ=255) aTTTTTGGCTACTGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtt > 2:2109067‑M2/1‑18 (MQ=255) tttGGCTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttct < 1:1607855‑M2/135‑121 (MQ=255) cTACTGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagtt < 2:3218984‑M2/135‑126 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgctagagaacccgcggtttcttagttcatt > 2:1258051‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 1:2462173‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 2:1876029‑M2/1‑6 (MQ=255) tGCTCCgacttgtcctcgataagaattgtagcgccgtgatttacgtgtgtatgtcgttacttttattcctagcttcttgatcaggcgctgaactttctttttattgatagagaacccgcggtttcttagttcatt > 2:2431188‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 1:2860211‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 2:441551‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 1:3198560‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 1:1146949‑M2/1‑6 (MQ=255) tGCTCCaacttttcctcgataagaattgtagcgacgtgatttacgcgtgtatgccgttacttttattcctagcttcttgatcaagcgctgaactttctttttattgatagagaaaccgcggtttcttagttcatt > 1:1946429‑M2/1‑6 (MQ=255) | TACAATTTCTTTTGACGGATAATGCCTTTGGCATCCACTTCATGGTATTTAAATTCAGTTGTATCCGTCGTGATTTTCTGATGGCAGATACTGGTGTAGAAACGACGATGGATCCGATTTTTGGCTACTGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_57/360‑493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |