New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_44 = 810668 (0.940)207 (0.520)
+GCACTCTTGTCACCATCAAT
53/214 1.4 42.4% coding (327/1134 nt) rasttk_feature_annotation_tool=annotate_proteins_km er_v2 hypothetical protein
?AssemblyC74_contig_60 = 439 0 (0.000)coding (438/438 nt) rasttk_feature_annotation_tool=annotate_proteins_si milarity FIG00630508: hypothetical protein

Only 100 of 251 total aligned reads displayed.

TACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_60/307‑439
                                                                                                                                    |                                                                                                                            
tACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  1:2095111‑M2/1‑133 (MQ=255)
tACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  2:672920‑M2/1‑133 (MQ=255)
tACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  1:3330474‑M2/1‑133 (MQ=255)
tACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  2:558940‑M2/1‑133 (MQ=255)
 aCGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAatt                                                                                                                           >  1:2225263‑M2/1‑132 (MQ=255)
      gAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatgg                                                                                                                      >  1:1768437‑M2/1‑127 (MQ=255)
       aaTGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggt                                                                                                                     >  2:3234986‑M2/1‑126 (MQ=255)
       aaTGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggt                                                                                                                     >  1:317834‑M2/1‑126 (MQ=255)
       aaTGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggt                                                                                                                     >  1:2745231‑M2/1‑126 (MQ=255)
          gttatgttTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgac                                                                                                                  >  1:3128956‑M2/1‑123 (MQ=255)
          gttatgttTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgac                                                                                                                  >  1:2592199‑M2/1‑123 (MQ=255)
           ttatgttTTTGAGTGGTATTTTACAAGGTTGTGTCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgaca                                                                                                                 >  2:865147‑M2/1‑122 (MQ=255)
           ttatgttTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgaca                                                                                                                 >  2:2175635‑M2/1‑122 (MQ=255)
                tttATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagag                                                                                                             <  1:1959503‑M2/134‑18 (MQ=255)
                     gAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatt                                                                                                       <  1:2756250‑M2/135‑24 (MQ=255)
                      aGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatt                                                                                                       <  2:2890372‑M2/134‑24 (MQ=255)
                      aGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatt                                                                                                       <  1:2040227‑M2/134‑24 (MQ=255)
                        tGGTATATTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcattta                                                                                                     <  1:76652‑M2/134‑26 (MQ=255)
                           tATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcg                                                                                                 <  1:1557517‑M2/135‑30 (MQ=255)
                             tGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtt                                                                                               >  2:2274391‑M2/1‑104 (MQ=255)
                             tGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtt                                                                                               <  2:1250979‑M2/135‑32 (MQ=255)
                                  cAAGGTTGTGGCTCTTTAACCACATTAGCTGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttct                                                                                          >  1:401845‑M2/1‑99 (MQ=255)
                                    attttgtgGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  1:1957773‑M2/4‑97 (MQ=255)
                                    aGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  2:2294706‑M2/1‑97 (MQ=255)
                                    aGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  2:76652‑M2/1‑97 (MQ=255)
                                     ggTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgtt                                                                                       <  2:2664619‑M2/135‑40 (MQ=255)
                                     ggTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgat                                                                                       <  2:1401827‑M2/135‑40 (MQ=255)
                                     ggTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAatt                                                                                                                           >  1:2634616‑M2/1‑96 (MQ=255)
                                       ttGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatat                                                                                     <  2:1581864‑M2/135‑42 (MQ=255)
                                       ttGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatat                                                                                     <  1:1625215‑M2/135‑42 (MQ=255)
                                        tgtgGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatc                                                                                    <  1:230708‑M2/135‑43 (MQ=255)
                                            gCTCTTTAACCACATTCGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  2:1049876‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  2:3228677‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  2:2082345‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  1:530824‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  1:477460‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  1:3279862‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  2:1661509‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  2:585715‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatt                                                                                <  2:1390375‑M2/135‑47 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  1:182166‑M2/1‑89 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttct                                                                                          <  2:1982594‑M2/125‑37 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgat                                                                                                                        >  1:1458606‑M2/1‑89 (MQ=255)
                                            gCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgat                                                                                                                        <  2:1458606‑M2/95‑7 (MQ=255)
                                             ctctTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaattt                                                                               <  2:1821491‑M2/135‑48 (MQ=255)
                                             ctctTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaattt                                                                               <  1:216934‑M2/135‑48 (MQ=255)
                                               ctTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttag                                                                             >  1:2099237‑M2/1‑86 (MQ=255)
                                                  tAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatg                                                                          >  2:2192643‑M2/1‑83 (MQ=255)
                                                         aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  1:3373330‑M2/1‑76 (MQ=255)
                                                         aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  1:1662532‑M2/1‑76 (MQ=255)
                                                         aTTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaa                                                                   >  1:1195001‑M2/1‑76 (MQ=255)
                                                           tAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaat                                                                  <  2:975018‑M2/134‑61 (MQ=255)
                                                            aGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatgtcaatttagatgcatcaaat                                                                  <  2:2494883‑M2/133‑61 (MQ=255)
                                                            aGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaat                                                                  <  2:3330328‑M2/133‑61 (MQ=255)
                                                             gATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaat                                                                  <  1:1212759‑M2/132‑61 (MQ=255)
                                                                   agtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaa                                                                                                                <  2:3383416‑M2/80‑15 (MQ=255)
                                                                    gtcaTTGGGACACGTCGAAGGATTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTActtgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  1:2674779‑M2/1‑65 (MQ=255)
                                                                    gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  2:1130663‑M2/1‑65 (MQ=255)
                                                                    gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  2:1183964‑M2/1‑65 (MQ=255)
                                                                    gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  1:691205‑M2/1‑65 (MQ=255)
                                                                    gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  2:1915185‑M2/1‑65 (MQ=255)
                                                                    gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  2:1557517‑M2/1‑65 (MQ=255)
                                                                    gtaaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        >  2:313269‑M2/1‑65 (MQ=255)
                                                                      aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  2:657470‑M2/135‑73 (MQ=255)
                                                                      aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  1:1325032‑M2/135‑73 (MQ=255)
                                                                      aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  2:2373850‑M2/135‑73 (MQ=255)
                                                                      aaTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      <  2:1861843‑M2/135‑73 (MQ=255)
                                                                       aTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      >  2:2008801‑M2/1‑62 (MQ=255)
                                                                       aTTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaa                                                      >  1:1250979‑M2/1‑62 (MQ=255)
                                                                             aTACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcg                                               <  1:1365384‑M2/135‑80 (MQ=255)
                                                                               aCGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatgtcaatttagatgcatcaaatatctggttagaagatgtcgt                                              >  1:2494883‑M2/1‑54 (MQ=255)
                                                                                cGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaa                                            >  1:986927‑M2/1‑53 (MQ=255)
                                                                                    gAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacac                                        <  2:2043989‑M2/135‑87 (MQ=255)
                                                                                        gTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtg                                    <  1:3545939‑M2/135‑91 (MQ=255)
                                                                                        gTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAa                                                                                                                             >  1:2279261‑M2/1‑45 (MQ=255)
                                                                                           tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:3228677‑M2/1‑42 (MQ=255)
                                                                                           tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:113286‑M2/1‑42 (MQ=255)
                                                                                           tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:1184857‑M2/1‑42 (MQ=255)
                                                                                           tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:873996‑M2/1‑42 (MQ=255)
                                                                                           tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  1:822403‑M2/1‑42 (MQ=255)
                                                                                           tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:3545939‑M2/1‑42 (MQ=255)
                                                                                           tttCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaat                                 >  2:1421835‑M2/1‑42 (MQ=255)
                                                                                              cTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacg                              <  2:2728036‑M2/135‑97 (MQ=255)
                                                                                              cTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttag                                                        <  2:2685081‑M2/109‑71 (MQ=255)
                                                                                               ttATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgt                             <  1:2720085‑M2/135‑98 (MQ=255)
                                                                                               ttATGGGTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgt                             >  2:1716624‑M2/1‑38 (MQ=255)
                                                                                                     gTGACATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctga                                                                                        >  2:1212650‑M2/1‑32 (MQ=255)
                                                                                                        aCATATTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaa                     >  2:1959503‑M2/1‑29 (MQ=255)
                                                                                                          atatTTGATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaaga                   >  1:112366‑M2/1‑27 (MQ=255)
                                                                                                                gATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcg            >  1:635267‑M2/1‑21 (MQ=255)
                                                                                                                gATGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcg            >  1:1908305‑M2/1‑21 (MQ=255)
                                                                                                                 aTGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttcttatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgc           >  1:1997985‑M2/1‑20 (MQ=255)
                                                                                                                 aTGGTGTAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgc           <  2:34843‑M2/135‑116 (MQ=255)
                                                                                                                      gtAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcatacc      <  1:2438278‑M2/135‑121 (MQ=255)
                                                                                                                       tAAAAAATTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcatacc      >  1:1727484‑M2/1‑14 (MQ=255)
                                                                                                                        aaaaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcataccgt    <  1:329444‑M2/135‑123 (MQ=255)
                                                                                                                        aaaaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgt                          >  2:3075008‑M2/1‑13 (MQ=255)
                                                                                                                        aaaaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgt                          <  1:3075008‑M2/113‑101 (MQ=255)
                                                                                                                        aaaaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgt                                              >  1:3452251‑M2/1‑13 (MQ=255)
                                                                                                                          aaaaTTGTGTAattgatggtgacaagagtgcatttactcgtttttctgatatcaatttagatgcatcaaatatctggttagaagatgtcgtaaacacagtgaatacgttgtttaaagatgatgcgcataccgttt  <  1:610682‑M2/135‑125 (MQ=255)
                                                                                                                                    |                                                                                                                            
TACGTCGAATGTTATGTTTATGAGTGGTATGTTCCAAGGTTGTGGCTCTTTAACCACATTAGATGTAAGTAATTGGGATACGTCGAAGGTTTTTCTTATGGGTGACATATTTGATGGTGTAAAAAATTGTGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_60/307‑439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.