Predicted mutation
evidence seq id position mutation annotation gene description
RA AssemblyC74_contig_12 59,272 G→A T22T (ACC→ACT rasttk_feature_annotation_tool=annotate_proteins_km er_v2 ← Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AssemblyC74_contig_1259,2720GA99.3% 994.8 / ‑4.0 294T22T (ACC→ACTrasttk_feature_annotation_tool=annotate_proteins_km er_v2Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (132/158);  total (135/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 295 total aligned reads displayed.

GTCTGACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCCAATTCATACCCCGTTGGCGCTTGGGTTTCTACCAGCTGATACACTCCTGGTGCTAAGCCGTCAATCGCCAGTTTTCCATCTGCTCCTGTGGTTAGACCTGACTGCAGAACGGTTCCATTGGCATCTTGTAACTCAAAAACAGCTCCTTGCAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_12/59141‑59337
                                                                                                                                   |                                                                                                                                   
gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTATACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  1:317283/135‑1 (MQ=17)
gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  2:934925/135‑1 (MQ=17)
gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  1:767188/135‑1 (MQ=17)
gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  1:216602/135‑1 (MQ=17)
gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  2:444410/135‑1 (MQ=17)
gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  2:378884/135‑1 (MQ=17)
gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  >  2:1979922/1‑135 (MQ=17)
 tCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTa                                                                                                                                 >  1:1185904/1‑135 (MQ=17)
   tGACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAa                                                                                                                                >  2:507768‑M1/1‑133 (MQ=255)
   tGACTTCTTTCGATCTCAAACTCGATTGGAGTCGCATCTACTTCATACCCGAATGGCGCTTGAGTATCTACAAGCTGATATGCTCCTCGTGCTAAACCGTCAATTGCCAGTTTTACATCGTCTCCTGTAGTTac                                                                                                                                >  1:581967/1‑133 (MQ=255)
   tGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTAg                                                                                                                                >  1:995710/1‑134 (MQ=17)
    gACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTAGAc                                                                                                                              >  2:157229/1‑135 (MQ=14)
     aCTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaacc                                                                                                                             <  1:2468392‑M1/135‑5 (MQ=255)
     aCTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTAGAcc                                                                                                                             >  1:2423477/1‑135 (MQ=14)
        tcttTCGATCTCACACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTAGAccggt                                                                                                                          <  2:2575254/135‑4 (MQ=14)
        tcttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggt                                                                                                                          <  1:1045980‑M1/135‑8 (MQ=255)
         cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                         <  1:1799369/135‑5 (MQ=14)
         cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                         >  2:2219736/1‑131 (MQ=14)
         cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                         <  1:2589511/135‑5 (MQ=14)
         cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                         <  1:910585/135‑5 (MQ=14)
         cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                         >  2:757331/1‑131 (MQ=14)
         cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                         <  1:1123061/135‑5 (MQ=14)
         cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAAAccggtt                                                                                                                         <  2:205997/135‑5 (MQ=14)
         cttTCGATCTCAAACTCGATTGGTGTCGAATCTAATTCATAACCTATTGGCGCTTGAGTTTCTACCAGCTGATATGATCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTCGTTAGAccgggt                                                                                                                         >  1:235227/1‑131 (MQ=14)
              gATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGGGTTTCTACCAGCTGATATGTTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  2:1409343/121‑1 (MQ=14)
                  tcAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  <  2:2458181/117‑1 (MQ=11)
                  tcAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                                  >  1:505713/1‑117 (MQ=11)
                                                            gcTTGTGTTTCTACCAGCTGATATGTTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAcaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaag                                                                       <  2:2354656‑M1/134‑59 (MQ=255)
                                                                  gTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttc                                                                 >  2:2300441‑M1/1‑70 (MQ=255)
                                                                  gTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttc                                                                 >  1:1965278‑M1/1‑70 (MQ=255)
                                                                  gTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttc                                                                 >  2:3513400‑M1/1‑70 (MQ=255)
                                                                  gTTTCTACCAGCTGAAACACTCCTGGTGCTAAGCCGTCAATCGCCAGTTTTACATCATCTCCAGAGGATAAACAAGACTGCAGAACGGTTCAATTGGCGTCTGGAAACTCAAAAACAGCGCCTTGCAGGActtc                                                                 >  2:2235564/1‑131 (MQ=255)
                                                                   tttCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttca                                                                <  2:1899024‑M1/134‑66 (MQ=255)
                                                                    ttCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcac                                                               >  1:1557363‑M1/1‑68 (MQ=255)
                                                                    ttCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcac                                                               >  1:1907692‑M1/1‑68 (MQ=255)
                                                                        aCCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccact                                                           >  1:1401743‑M1/1‑64 (MQ=255)
                                                                               gatatgctcctggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttca                                                    <  1:2779448‑M1/128‑78 (MQ=255)
                                                                               gatatgctcctggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttc                                                     <  1:1275141‑M1/127‑77 (MQ=255)
                                                                               gatatgctcctggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgcctt                                                      <  2:1870580‑M1/126‑76 (MQ=255)
                                                                                atatgctcctgGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagc                                                  >  2:1648127‑M1/6‑56 (MQ=255)
                                                                                atatgctcctgGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagc                                                  >  1:2239736‑M1/6‑56 (MQ=255)
                                                                                atatgctcctgGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagc                                                  >  2:3420048‑M1/6‑56 (MQ=255)
                                                                                atatgctcctgGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagc                                                  >  1:1326281‑M1/6‑56 (MQ=255)
                                                                                       cccggtgcTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  2:3263905‑M1/131‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  2:370914‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  2:291651‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  2:988618‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  1:192127‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  1:2142967‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  1:2654601‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  1:2912534‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  1:3011329‑M1/134‑86 (MQ=255)
                                                                                       ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccgtctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  2:1251721‑M1/134‑86 (MQ=255)
                                                                                        cTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaa                                          >  1:2576590‑M1/1‑48 (MQ=255)
                                                                                          ggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatt                                        <  1:399513‑M1/135‑90 (MQ=255)
                                                                                          ggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatt                                        >  2:711368‑M1/1‑46 (MQ=255)
                                                                                           gTGCTAAACCGTCACTGGCCAGTTTTCCATCTTCTCCTGTAGTGAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatta                                       <  2:581967‑M1/135‑91 (MQ=255)
                                                                                           gTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatta                                       <  1:3514543‑M1/135‑91 (MQ=255)
                                                                                           gTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatta                                       <  1:2525850‑M1/135‑91 (MQ=255)
                                                                                             gCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattag                                      >  1:723488‑M1/1‑43 (MQ=255)
                                                                                             gCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttca                                                                <  2:3047483‑M1/108‑66 (MQ=255)
                                                                                             gCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaa                                                                        <  1:1008590‑M1/100‑58 (MQ=255)
                                                                                                 aaccgtCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  1:169489‑M1/122‑86 (MQ=255)
                                                                                                 aaccgtCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttg                                                                          <  2:2321806‑M1/92‑56 (MQ=255)
                                                                                                   ccGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaac                                >  1:3059334‑M1/1‑37 (MQ=255)
                                                                                                   ccGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtatctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaac                                >  2:858936‑M1/1‑37 (MQ=255)
                                                                                                     gTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAtaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacacc                             <  2:3179782‑M1/135‑101 (MQ=255)
                                                                                                     gTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggact                                                                   >  1:695375‑M1/1‑35 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  2:2533123‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  1:1986942‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  2:2992744‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  2:2429097‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  2:105232‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  1:3088048‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  1:2813963‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  2:2129068‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                         >  1:2749788‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacac                              >  1:2123263‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaa                                 <  1:3317138‑M1/124‑97 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattag                                      >  2:1469908‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattag                                      <  1:1469908‑M1/119‑92 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            <  2:1174094‑M1/113‑86 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                            >  1:1174094‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaa                                                                                    >  2:2184385‑M1/4‑31 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctg                                                                                               <  1:3269474‑M1/62‑35 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttc                                                                                                 <  2:1813285‑M1/60‑33 (MQ=255)
                                                                                                         attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttc                                                                                                 >  2:1727937‑M1/4‑31 (MQ=255)
                                                                                                           tgcCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgt                       >  1:443775‑M1/2‑29 (MQ=255)
                                                                                                            gCCAGTTTTCCATCTTCTCCTGTAGTTAatccggtttgtatcgtttctacttataggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgta                      <  2:3087607‑M1/135‑108 (MQ=255)
                                                                                                               aGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcacccctgccttcagcatgtttaattagttcaacaccacccgtatca                   <  2:2122839‑M1/135‑111 (MQ=255)
                                                                                                                gTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaa                  >  1:1101533‑M1/1‑24 (MQ=255)
                                                                                                                gTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaaca                                                                                  >  1:3190596‑M1/1‑24 (MQ=255)
                                                                                                                        tcttctCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttt          <  1:2218609‑M1/135‑120 (MQ=255)
                                                                                                                        tcttctCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttt          <  1:167964‑M1/135‑120 (MQ=255)
                                                                                                                        tcttctCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttt          <  2:2685119‑M1/135‑120 (MQ=255)
                                                                                                                             tCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttttcaat     <  1:270589‑M1/135‑125 (MQ=255)
                                                                                                                              ccTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttttcaatg    >  2:3283337‑M1/1‑10 (MQ=255)
                                                                                                                              ccTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttttcaatg    <  1:2672795‑M1/135‑126 (MQ=255)
                                                                                                                              ccTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagccccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttttcaatg    <  1:1498328‑M1/135‑126 (MQ=255)
                                                                                                                                tgtaGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttttcaatggt  >  1:3436057‑M1/1‑8 (MQ=255)
                                                                                                                                   |                                                                                                                                   
GTCTGACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCCAATTCATACCCCGTTGGCGCTTGGGTTTCTACCAGCTGATACACTCCTGGTGCTAAGCCGTCAATCGCCAGTTTTCCATCTGCTCCTGTGGTTAGACCTGACTGCAGAACGGTTCCATTGGCATCTTGTAACTCAAAAACAGCTCCTTGCAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_12/59141‑59337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: