| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AssemblyC74_contig_1 | 443,483 | (T)6→5 | intergenic (+612/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity → / – | Conserved hypothetical protein ArsC related/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AssemblyC74_contig_1 | 443,478 | 0 | T | . | 76.8% | 3634.6 / inf | 1523 | intergenic (+607/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Conserved hypothetical protein ArsC related/– |
| Reads supporting (aligned to +/- strand): ref base T (199/153); new base . (700/464); total (902/621) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1667 total aligned reads displayed.
TATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/443344‑443529 | gatatAAAAGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACAtttt < 1:2050660/135‑1 (MQ=38) taAAAGTTGCTACGGCAGCCAAAATCGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaac > 2:1474983/1‑132 (MQ=255) taAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaac < 2:874897/135‑4 (MQ=255) aaaaGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaaca > 2:1512578/1‑131 (MQ=38) aaaaGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaaca > 1:1278562/1‑131 (MQ=255) aaaaGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaaca > 2:1131555/1‑131 (MQ=255) aaaaGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACACTAAACAtttttaaca > 2:2080547/1‑131 (MQ=255) aaaaGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACAtttttaaca < 1:1877583/135‑5 (MQ=255) aaaaGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACAtttttaaca < 1:431878/135‑5 (MQ=255) aaaaGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACAtttttaaca < 1:78914/135‑5 (MQ=255) aaaaGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCATTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaaca < 1:1150634/135‑5 (MQ=38) aaaaGTAGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTTTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaaca > 1:304144/1‑131 (MQ=255) aaaTTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAAcaa < 1:1188655/135‑1 (MQ=39) tttcTACTGCAGCCAAAAACGAATCGGGGACCACTCCTGTTGAAGTAGAACTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTATGTCGTCTTGATTCAATTCAATACAAGAAACATTTTTTAAcaagca > 1:2086666/4‑135 (MQ=255) aCGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat > 2:1614571/1‑135 (MQ=255) aCGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat > 1:390748/1‑135 (MQ=255) gCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCt > 2:831889/1‑134 (MQ=255) gCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTa < 1:476201/135‑1 (MQ=255) ccAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCt > 2:1085355/1‑134 (MQ=255) aaaaaCGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAg < 2:2335225/134‑1 (MQ=255) tgAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTTTAGGGCGTCTTGATTCAATTCAAGACAATAAAC‑GTTTTTAACAATCAAGCAAAATGCTAGcaaacaa > 1:2288536/2‑135 (MQ=255) aTCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAAtt > 2:676522/1‑135 (MQ=255) tCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAAtt < 1:2001325/135‑1 (MQ=255) gggaAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTg > 1:2235059/1‑133 (MQ=255) gggaAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTg > 2:1701527/1‑133 (MQ=255) aaCACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt < 2:1397226/134‑1 (MQ=255) aaCACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt < 1:2567886/134‑1 (MQ=255) aaCACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt < 1:336234/134‑1 (MQ=255) ccacTCCTGATGAAGTAGACCTTTGAAACCTGAACACAGTAAGACAAACCACATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt < 2:1905396/133‑1 (MQ=255) acacTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt < 1:2172367/134‑1 (MQ=255) tgatgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGAAAACAAACATTTTTTAACAAGCAAGCAATCTGCTAGCAAACAAAATGAGCTTAACAATCg > 2:1202653/1‑135 (MQ=255) atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa > 2:722585‑M1/1‑132 (MQ=255) gACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGTCAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttc > 1:980656‑M1/1‑124 (MQ=255) gACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgtt > 2:1748412‑M1/1‑125 (MQ=255) gACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgt < 2:1835748‑M1/133‑10 (MQ=255) tttGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAAcaagc > 2:2565697/1‑82 (MQ=255) tttGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaac > 2:2525039‑M1/1‑120 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:705899‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttt > 1:1825670‑M1/1‑116 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 2:1249983‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:1614280‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 2:2300640‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:737227‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:893506‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttgt > 1:1969951‑M1/1‑115 (MQ=255) aaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttta < 1:1773546‑M1/135‑22 (MQ=255) aaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTATTGATTCAATTAAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt < 1:649286‑M1/134‑21 (MQ=255) aCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaacttttta < 1:2426159‑M1/135‑22 (MQ=255) aCAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagag > 2:916736‑M1/1‑108 (MQ=255) aCAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagag > 1:941648‑M1/1‑108 (MQ=255) aaGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtt > 1:1515483‑M1/1‑106 (MQ=255) aGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg < 1:1231274‑M1/135‑32 (MQ=255) aaaCCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcct > 1:2352066‑M1/1‑97 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCACTATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:2136728‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCTctagattgttcgaactttttatgagagtttgatcctggctcag > 1:1478389‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:2170980‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcag > 2:2376025‑M1/1‑92 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcag > 2:2406210‑M1/1‑92 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcagg < 2:22695‑M1/135‑45 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcagg < 2:504636‑M1/135‑45 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:1284955‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:1927061‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:1695223‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:1646517‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:1668545‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:410723‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCAAGCAAACAAATTGAGCTTAACAATCGccagattgttcgaacttattatgatagtttgatcctggctcag > 1:84369‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAAATCAAGACAACAAACAATTTTT‑ACAAGCAAGCAATATGCAAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactgtttatgagagtttgatccaggctctg > 1:589513‑M1/1‑91 (MQ=255) ggCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgct > 2:452624‑M1/1‑81 (MQ=255) ggCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgct > 1:2528138‑M1/1‑81 (MQ=255) cGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc > 2:2484867‑M1/1‑79 (MQ=255) cGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctg < 2:1781897‑M1/133‑55 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACACATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:2483159‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAACTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:365412‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1417681‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1566126‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:2436602‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:287434‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCGAGCAAACAAATTGAGCTTAACAAACGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1747034‑M1/134‑57 (MQ=255) tCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:2048984‑M1/134‑57 (MQ=255) tCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:635507‑M1/134‑57 (MQ=255) tCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1346898‑M1/134‑57 (MQ=255) tCTTGAATCAATACAAGACAACAAACATATTTTAACAAGCAATCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:1988494‑M1/134‑57 (MQ=255) ttGATTCACTTCAAGACAACAAACA‑TTTTTAACAAGGAAGCTATTTGCTAGCAAACAAATTGAGCTTACCAATCGcaagagtgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg < 1:1304340‑M1/135‑61 (MQ=255) ttGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg < 2:586293‑M1/135‑61 (MQ=255) ttGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg < 1:2137614‑M1/135‑61 (MQ=255) ttGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg < 1:523747‑M1/135‑61 (MQ=255) tGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt < 2:103461‑M1/135‑62 (MQ=255) gATTCAATTCTAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 2:955409‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg > 1:1118704‑M1/1‑74 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 2:1169633‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc > 2:555546‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttctatgagagtttgatcctggctcaggacgaacgctggc > 2:781021‑M1/1‑73 (MQ=255) ttcaattcaaGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttgtatgagagtttgatcctggctcaggacgaacgctggcggcgtgcc > 2:1561070‑M1/1‑71 (MQ=255) attcaaGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaat < 1:2392603‑M1/135‑69 (MQ=255) gACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgc < 1:1007350‑M1/135‑75 (MQ=255) acaacaAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgc > 1:103595‑M1/1‑61 (MQ=255) aataaaca‑tttTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcta > 2:1340910‑M1/4‑58 (MQ=255) aaacaTTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtc > 2:2212358‑M1/1‑56 (MQ=255) acaTTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt < 2:1948423‑M1/115‑62 (MQ=255) | TATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/443344‑443529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |