| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_1 | = 221 | 321 (1.110) | 214 (0.790) | 53/244 | 1.8 | 58.5% | intergenic (–/‑371) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Two‑component transcriptional response regulator, OmpR family |
| ? | AssemblyC74_contig_12 | 8 = | 0 (0.000) | intergenic (–/+152) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Polygalacturonase (EC 3.2.1.15) | |||||
Only 100 of 355 total aligned reads displayed.
TTTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/81‑221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgactTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAAATATTATTTAAG > AssemblyC74_contig_12/8‑141 aTAAAAG‑TTTTTTCGATTTCGTTTTTCTAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTTTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 1:2228049/134‑1 TTAAAAT‑TTTTTTCGATTTCTTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAA < 1:982759/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 1:1559518/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:2460633/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:2488142/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:326469/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:1854338/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 1:2555797/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:2387940/135‑1 TTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAA < 1:721533/135‑1 TAAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:601861/135‑1 TAAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 2:1620008/135‑1 TAAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA < 1:603872/135‑1 AAAAT‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATACCTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATATAATCAAGCTTGGCAAGTGGTTCTTTTTTAACG < 2:513750/135‑1 AAAAGTTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAAC > 2:841314/1‑135 AAAAG‑TTTTTTCTATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 1:674924/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 2:1141147/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 1:430335/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAAC > 1:178631/1‑134 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAATAACTTTTTTGAAGTTTTTTTCGATATAATCAAGCTTCACAAGTGGTTCTTTTTTAAC > 1:560425/1‑134 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGATTCAAGCTTCACAAGTGGTTCTTTTTTAACG < 2:2054035/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACG < 2:1747034/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACG < 1:1003924/135‑1 AAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAAATCATTTATCATAACTTATCGTTTGTTATTTGACAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACG < 2:2567886/135‑1 aaagtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCTTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 1:1031021/130‑1 aaagtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 2:459950/130‑1 aaagtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 1:1316564/130‑1 AAAT‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGA < 1:202975/135‑1 agtTTTTTTCGATTTGGTTTTTCGAAATGTTTAATCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGTATCAAGCTTCTCAAGTGGTTC‑TTTTTAACGACT < 1:2123143/132‑1 agtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACT < 1:33024/132‑1 AG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 1:383475/135‑1 AG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:1710530/135‑1 AG‑TTTTTTCGATTTCGTTTTTCGAAATCTTTCGGCAACTAATTTTTCATAACTTATCTTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 1:1127649/135‑1 AG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTTTTGGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTATTTTTTAACGACT < 1:1022491/135‑1 gtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT > 1:688649/3‑135 gtTTTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:2446337/133‑1 TTTTTCGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGT < 1:20743/135‑1 TTTTTCGATTTCGATTTTCGAAATCTTTGATCAACTCATTTATCATCCCTTATCGTTTGTTATTTGTCAAGAACTTTTTTGATGTTTTTTTCGAGAGATTCAAGCTTCGCAAGTGGTTCTTTTTTAACGACT < 2:665345/132‑1 CGATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCTTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCT < 2:47179/135‑1 GATTTCGTTTTTCGAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTT < 2:1806703/135‑1 TCGTTTTTCGTAATCTTTCAGCAACTAATTTATAATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGTATCAAGCTTCGCAATTGGTT‑ATTTTTAACGACTTAGTTATCTTATCA < 1:1264438/135‑1 GAAATCTTTCTGCCACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTGGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAA < 2:1965270/135‑1 GAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAA < 1:487311/135‑1 GAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAA < 1:241993/135‑1 GAAATCTTTCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAA < 1:2311601/135‑1 CATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTT > 1:1409080/1‑135 ATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTT > 2:121256/1‑135 TATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCAT > 2:1298620/1‑135 TATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTGTTTGGAATTTTCAT > 2:1166816/1‑135 GTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAACG < 1:456856/75‑1 GTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACTACTTATTTATCTTATCACGTCTAAAAAAATGTGTCAACTCTTTTTTTGAATTTTCATAAAA > 1:2512585/1‑135 GTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAA > 1:1910823/1‑135 GTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTAATAAAA > 1:1763848/1‑135 TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA > 1:366153/1‑72 TTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAA > 2:349551/1‑72 TTAATTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTT < 1:717202/135‑1 ATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCA > 2:2162961/1‑135 TTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA > 1:1511170/1‑65 TTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAt > 2:951793/1‑134 AGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCG < 1:813345/135‑1 TTTTTTGAATTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:2287907/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 1:1243562/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 1:1466487/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:403822/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:1911047/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:2523151/135‑1 TTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTCTCATAAAATGTTTCAATGAAGCGCGACA < 1:1717670/135‑1 TGAAGTTTTTTTCGATAGAATCAAGCTTCGCAAGTGGTTCTTTTTTAA > 2:10865/1‑48 AGAATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT < 2:77670/134‑1 AATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAA > 2:1441431/1‑135 AATCAAGCTTCGCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAA > 2:1503843/1‑135 AAGCTTCGCAAGTTGTTC‑TTTTTAACGAATTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAA < 2:1785880/135‑1 tcgCAAGTGGTTC‑TTTTTAACGACTTAGTTATATTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAA < 2:2235858/132‑1 cgCAAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAG > 1:902456/3‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAATCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 1:1065276/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCTCGACAACTTTGTTTAATATATCATT‑AAAATAAATAAAGGTC > 1:1336632/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAAataaa > 1:537354/1‑127 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTa > 1:2171820/1‑134 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 2:2107408/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 2:1357419/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 2:82952/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 2:1279733/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 2:629120/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 1:863017/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 1:1736247/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 1:1987610/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 2:2080062/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTC > 1:2363155/1‑135 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAA < 1:1594993/131‑1 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACA < 2:1032699/99‑1 AAGTGGTTC‑TTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTGTATTGGAATTTTCATAAAATGTTACAAATAAGCGCGACAACGTTGTTTAATATATCAGT‑AAAAAAAATAAAGGTC > 1:269669/1‑135 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATTAAAAAAAAATAAAGGTCAAGCTAA < 2:706613/134‑1 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAA < 2:284499/134‑1 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAA < 1:1291147/134‑1 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAA < 1:629120/133‑1 cTTTTTAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAAAAAAGTTCAAGCTAAA > 2:887466/2‑135 TAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAAATATT < 2:442117/135‑1 TAACGACTTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAAATATT < 1:2107400/135‑1 TTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAAATATTATTTAAG < 1:1669294/135‑1 TTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAAATATTATTTAAG < 2:1567364/135‑1 TTTAAAAG‑TTTTTTCGATTTCGTTTTTCGAAATCTTCCAGCAACTCATTTATCATAACTTATCGTTTGTTATTTGTCAAGAACTTTTTTGAAGTTTTTTTCGATAGAATCAAGCTTCACAAGTGGTTCTTTTTTAACGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/81‑221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgactTAGTTATCTTATCACGTCTAAAAACATGTGTCAACTCTTTTTTGGAATTTTCATAAAATGTTTCAATGAAGCGCGACAACGTTGTTTAATATATCATT‑AAAAAAAATAAAGGTCAAGCTAAAATATTATTTAAG > AssemblyC74_contig_12/8‑141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |