| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_19 | = 19031 | 0 (0.000) | 247 (0.730) | 78/258 | 0.1 | 100% | intergenic (+109/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Phage lysin, N‑acetylmuramoyl‑L‑alanine amidase (EC 3.5.1.28)/– |
| ? | AssemblyC74_contig_53 | = 622 | 0 (0.000) | coding (1/498 nt) | rasttk_feature_annotation_tool=annotate_proteins_si milarity | Mobile element protein | |||||
Only 100 of 249 total aligned reads displayed.
GGTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_19/18897‑19031 | aTTTATATATTCCGCAACGATCAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTCAGAAAAAAGTAGTTtc < 2:771513‑M1/134‑3 (MQ=255) atatTCCGCAACGATAAAAAATGGCCCCTCGTTGTGAGGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactat > 2:1920129‑M1/1‑126 (MQ=255) tatTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatt > 1:253425‑M1/1‑125 (MQ=255) cGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaat > 2:1698469‑M1/1‑120 (MQ=255) cGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaat > 1:760014‑M1/1‑120 (MQ=255) aaCGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactctttaaataac > 1:2341681‑M1/1‑117 (MQ=255) cGATAAAAAATGGCCCCTCGTGGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacga > 1:1924894‑M1/1‑115 (MQ=255) aaaaaaTGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggc < 1:972457‑M1/135‑25 (MQ=255) aaaaaaTGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaagg < 2:1479046‑M1/134‑24 (MQ=255) aaTGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggc > 2:300802‑M1/1‑107 (MQ=255) ccTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaata < 2:376315‑M1/135‑36 (MQ=255) tCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatc < 1:1526712‑M1/135‑38 (MQ=255) gTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatctt < 2:881255‑M1/135‑40 (MQ=255) tgCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaa > 2:2567942‑M1/1‑87 (MQ=255) cACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaat > 1:2508434‑M1/1‑85 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTTTTTTTAAGAAAAAATTAGTTtcagaatatttaaataactaaggcggctacaaatatcttgcacataaatat > 1:485910‑M1/1‑84 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatat > 1:397056‑M1/1‑84 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatat > 1:1009614‑M1/1‑84 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatat > 1:1761173‑M1/1‑84 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaa > 2:2563455‑M1/1‑84 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaa < 1:2563455‑M1/105‑22 (MQ=255) ccccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatc > 2:1930233‑M1/1‑83 (MQ=255) ccccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatc > 1:27342‑M1/1‑83 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:2406735‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 1:2230099‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:1336643‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:225334‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 1:82920‑M1/135‑54 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 2:687654‑M1/135‑54 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 1:436772‑M1/135‑54 (MQ=255) cacaaTAGTTAGACTATATATCTAATTATAAGGGTTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaattatcttgcacataaatatca < 2:430911‑M1/133‑54 (MQ=255) aaaaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat < 1:1698469‑M1/135‑57 (MQ=255) aaaaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat < 1:1903176‑M1/135‑57 (MQ=255) aaaaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat > 2:2158222‑M1/1‑79 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 2:1204887‑M1/1‑77 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 2:2036094‑M1/1‑77 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 2:1720600‑M1/1‑77 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 1:1356966‑M1/1‑77 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 2:706340‑M1/1‑77 (MQ=255) ttAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatc > 2:2198177‑M1/1‑74 (MQ=255) tAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcg < 1:900766‑M1/135‑63 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:641214‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:2198177‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:1276935‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:1814051‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:593174‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:530266‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:286224‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcg < 2:755581‑M1/134‑63 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcg < 2:1356966‑M1/134‑63 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatc < 1:2409039‑M1/133‑62 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTCTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:920368‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGATTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatc < 1:328152‑M1/133‑62 (MQ=255) tacTATAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgtaggcggctacaaatatcttgcacatatatatcaattaaatcgta < 2:2274910‑M1/134‑65 (MQ=255) gACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta < 1:1047171‑M1/135‑65 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:1406382‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatagta > 1:1063115‑M1/1‑69 (MQ=255) ataaatcTAATTAAAAGGGGTTCTTTTTTTGCGTAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacact < 2:1963840‑M1/133‑69 (MQ=255) aGAAATCTAATTAAACGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacact < 1:139671‑M1/135‑69 (MQ=255) gAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactg < 2:2067250‑M1/135‑70 (MQ=255) aTCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggtt < 1:366291‑M1/135‑73 (MQ=255) aTCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactgg < 2:1761173‑M1/133‑71 (MQ=255) aTCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactgctt > 1:2275156‑M1/1‑63 (MQ=255) cTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAATAAGTAGTGtcagactatttaaataacgatggcggctacatatatcttgcacataaatatcaaataaatcgtacactggttag < 2:314824‑M1/135‑75 (MQ=255) tAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttaga < 1:635719‑M1/135‑76 (MQ=255) aaaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattg < 2:1406382‑M1/135‑81 (MQ=255) aaaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattg < 1:1077006‑M1/135‑81 (MQ=255) aaaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattg < 2:823466‑M1/135‑81 (MQ=255) aaaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacagag > 2:1117403‑M1/1‑55 (MQ=255) aaaGGTGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgg < 2:2052453‑M1/135‑82 (MQ=255) aaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgg < 2:1412064‑M1/135‑82 (MQ=255) aaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgg < 2:2148127‑M1/135‑82 (MQ=255) aaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgg < 2:2417163‑M1/135‑82 (MQ=255) aaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattggg < 2:936191‑M1/135‑83 (MQ=255) aaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattggg < 1:2567942‑M1/135‑83 (MQ=255) aaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggatacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattggg < 1:1998860‑M1/135‑83 (MQ=255) gggTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaa > 1:568335‑M1/1‑50 (MQ=255) gggTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaa > 2:1792951‑M1/1‑50 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTCAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt < 1:1190732‑M1/135‑91 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt < 1:725483‑M1/135‑91 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt > 2:184876‑M1/1‑45 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt > 1:1825889‑M1/1‑45 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatctagcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt > 2:609413‑M1/1‑45 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggc > 1:2043591‑M1/1‑45 (MQ=255) tttttttGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggattt > 1:115027‑M1/1‑44 (MQ=255) tttttGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaagatcttgcacataattatcaaataaatcgtacactggttagacagtgggtaaggatttat > 2:1832477‑M1/1‑42 (MQ=255) tGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataact < 2:1616718‑M1/135‑98 (MQ=255) gCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataacta < 1:2314993‑M1/135‑99 (MQ=255) gCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataacta < 1:1792952‑M1/135‑99 (MQ=255) cGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactat > 2:1093454‑M1/1‑36 (MQ=255) ataCATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggtt < 2:2526951‑M1/135‑107 (MQ=255) taCATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttg < 2:2490885‑M1/135‑108 (MQ=255) tttGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaa < 2:581860‑M1/135‑112 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 2:1101071‑M1/73‑54 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 1:1101071‑M1/1‑20 (MQ=255) tttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttg > 1:135856‑M1/1‑18 (MQ=255) tttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttg > 1:1520606‑M1/1‑18 (MQ=255) aGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggttg < 2:1520606‑M1/135‑122 (MQ=255) aaaaaaGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggttgga > 2:2110610‑M1/1‑12 (MQ=255) aaaGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggttggaggt < 2:568335‑M1/135‑127 (MQ=255) | GGTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_19/18897‑19031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |