| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_28 | = 5975 | 0 (0.000) | 272 (0.920) | 92/258 | 0.0 | 65.3% | intergenic (+36/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | YoeB toxin protein/– |
| ? | AssemblyC74_contig_30 | = 330 | 289 (1.020) | intergenic (+78/+111) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein/hypothetical protein | |||||
Only 100 of 272 total aligned reads displayed.
CTGGGAAATGGTCCAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_28/5842‑5975 | cTGGGAAATGGTCCAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGt > 2:2127075‑M1/1‑134 (MQ=255) tGGGAAATGGTCCAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtg < 1:1913382‑M1/135‑3 (MQ=255) aTGGTCCAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctt < 1:2216065‑M1/135‑9 (MQ=255) aTGGTCCAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctct < 2:670575‑M1/134‑8 (MQ=255) ccAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAATCTTTAAGtggctctttgtc < 1:96865‑M1/134‑13 (MQ=255) ccAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtc < 1:318529‑M1/134‑13 (MQ=255) ccAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtc < 1:1814023‑M1/134‑13 (MQ=255) cAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaa > 2:595655‑M1/1‑121 (MQ=255) agaagaATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaa < 2:928710‑M1/135‑16 (MQ=255) agaagaATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaa < 2:48003‑M1/135‑16 (MQ=255) agaagaATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaa < 2:147365‑M1/135‑16 (MQ=255) agaagaATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaa < 1:1382323‑M1/135‑16 (MQ=255) aagaaTCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCTAGGAAAGGGTCAGAAACTTTATGtggctctttgtcaaatc > 2:1531867‑M1/1‑118 (MQ=255) agaaTCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcg > 2:802939‑M1/1‑117 (MQ=255) agaaTCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcg > 2:224965‑M1/1‑117 (MQ=255) gaaTCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTTCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGTGTCAGAAACTTTAAGtggctctttgtcaaatc < 2:1705898‑M1/133‑18 (MQ=255) gaaTCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGACAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatc < 1:1270683‑M1/133‑18 (MQ=255) gaaTCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaat < 2:1652342‑M1/132‑17 (MQ=255) gaaTCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaat < 2:1401072‑M1/132‑17 (MQ=255) gaaTCACAGATGAAAATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatc < 2:296997‑M1/133‑18 (MQ=255) tCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggact < 1:859817‑M1/135‑23 (MQ=255) tCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggact < 2:1314043‑M1/135‑23 (MQ=255) cacaGATGAACATAGACTGATATATCTGTCTTAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactg < 1:656560‑M1/135‑24 (MQ=255) caGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgat < 2:1050157‑M1/135‑26 (MQ=255) caGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgat > 2:1852056‑M1/1‑110 (MQ=255) caGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgat < 1:107462‑M1/135‑26 (MQ=255) caGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaa < 1:1587101‑M1/125‑16 (MQ=255) gAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataag < 1:479991‑M1/133‑29 (MQ=255) gAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataa < 1:1289901‑M1/132‑28 (MQ=255) cATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtc > 2:2037240‑M1/1‑102 (MQ=255) tAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatct < 2:2402587‑M1/135‑36 (MQ=255) cTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCTAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctata > 2:857971‑M1/1‑96 (MQ=255) gATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaac > 1:1406456‑M1/1‑94 (MQ=255) gATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaac > 1:2098535‑M1/1‑94 (MQ=255) gATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaac > 2:719455‑M1/1‑94 (MQ=255) gATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGaggctctttgtcaaatcggactgataaggtcatctataaac > 1:342469‑M1/1‑94 (MQ=255) tatatGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataatcatca > 1:2327217‑M1/1‑90 (MQ=255) tatatGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatca > 2:1570840‑M1/1‑90 (MQ=255) tatatGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatca > 1:1507330‑M1/1‑90 (MQ=255) tatatGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatca > 1:186452‑M1/1‑90 (MQ=255) tatatGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatca > 2:2479077‑M1/1‑90 (MQ=255) tatatGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatc < 2:2222227‑M1/107‑18 (MQ=255) atatGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaa > 2:1146092‑M1/1‑89 (MQ=255) gCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatc < 1:1653682‑M1/101‑18 (MQ=255) tGAATATGAGACGATATTTATTTATTCTGCAAAAGATCATTAATAACTAATTGAAAGAAAGGAAAGGGTCAGTAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttag < 1:122916‑M1/134‑53 (MQ=255) tGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgttaaggtcatctataaacatcaaagttagt > 2:1079297‑M1/1‑82 (MQ=255) tGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatc < 2:259857‑M1/116‑35 (MQ=255) tGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatc > 1:259857‑M1/1‑82 (MQ=255) tGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggact > 2:2086238‑M1/1‑82 (MQ=255) gAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagta < 2:1605343‑M1/135‑55 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataatcatcaaagttagtaa > 1:2479160‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 1:282161‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 2:39710‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 1:1726320‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 1:1689592‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 2:1230991‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 1:2464344‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 2:2257969‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 1:2353606‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaa > 1:1607579‑M1/1‑80 (MQ=255) aaaaTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACAAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGaggctctttgtcaaatcggacagataaggtcatctataaacatcaaagttagtaa > 2:79676‑M1/1‑80 (MQ=255) aTGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaa > 2:457875‑M1/1‑77 (MQ=255) tGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagt < 1:56625‑M1/135‑60 (MQ=255) tGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagt < 1:228254‑M1/135‑60 (MQ=255) tGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagt < 2:1507330‑M1/135‑60 (MQ=255) ttatttattCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttg > 1:787296‑M1/1‑65 (MQ=255) ttatttattCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataa < 1:1024008‑M1/92‑28 (MQ=255) ttatttattCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataa > 2:1024008‑M1/1‑65 (MQ=255) atttattCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgat < 2:1130178‑M1/135‑73 (MQ=255) ttCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGGAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttt < 1:1051904‑M1/135‑78 (MQ=255) ttCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttt < 2:342312‑M1/135‑78 (MQ=255) ttCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttt < 2:2300243‑M1/135‑78 (MQ=255) ttCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgattt < 1:1523956‑M1/135‑78 (MQ=255) tGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgttttttt > 1:2412596‑M1/1‑55 (MQ=255) aaGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtg < 1:701930‑M1/135‑86 (MQ=255) cATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagc < 2:1631089‑M1/134‑90 (MQ=255) ttaACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgatt > 2:1669548‑M1/1‑40 (MQ=255) aaCTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaac < 2:575179‑M1/135‑98 (MQ=255) aaTTGAAAGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgt > 2:2399988‑M1/1‑34 (MQ=255) aaaGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgatt > 2:2345048‑M1/1‑29 (MQ=255) aaaGCAAGGAAAGGGTCAGAAACGTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacacgttgatt > 2:660948‑M1/1‑29 (MQ=255) aGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtg > 1:1736981‑M1/1‑27 (MQ=255) aGCAAGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtg < 2:1736981‑M1/112‑86 (MQ=255) aaGTAAAGGGTCAGAAACTTTAAGtggctcattgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgattttttttgatgtgtcgctgattaacacgttgattagtaa > 2:2104319‑M1/1‑24 (MQ=255) aaGGAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaa > 1:671571‑M1/1‑24 (MQ=255) ggAAAGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaa > 1:1825970‑M1/1‑22 (MQ=255) aaaGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtg < 1:226126‑M1/105‑86 (MQ=255) aaGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatc > 1:429460‑M1/1‑19 (MQ=255) aaGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaat < 2:2173582‑M1/133‑115 (MQ=255) aGGGTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatcc < 1:2053860‑M1/134‑117 (MQ=255) gggTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgc < 1:2257969‑M1/135‑119 (MQ=255) gggTCAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgc < 2:288576‑M1/135‑119 (MQ=255) cAGAAACTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaag < 1:2127075‑M1/134‑122 (MQ=255) aaCTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaagcgcat > 1:1561252‑M1/1‑9 (MQ=255) aCTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaagcgcata > 1:1970673‑M1/1‑8 (MQ=255) aCTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaagcgca < 1:2345057‑M1/133‑126 (MQ=255) aCTTTAAGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaagcgca < 1:457875‑M1/133‑126 (MQ=255) aaGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaagcgcatattggt < 1:1644320‑M1/135‑133 (MQ=255) aGtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaagcgcatattggtg < 2:2465618‑M1/135‑134 (MQ=255) gtggctctttgtcaaatcggactgataaggtcatctataaacatcaaagttagtaaaagtcactagctttgatgtttttttatgtgtagctgattaacccgttgattagaaaaatccgcaagcgcatattggtga > 1:1136284‑M1/1‑1 (MQ=255) | CTGGGAAATGGTCCAGAAGAATCACAGATGAACATAGACTGATATATATGGCTGAAAATGAGACGATATTTATTTATTCTGCAAAAGATCATTATTAACTAATTGAAAGCAAGGAAAGGGTCAGAAACTTTAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_28/5842‑5975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |