| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | 1 = | 0 (0.000) | 935 (0.570) +AGTGT |
130/248 | 0.5 | 100% | intergenic (–/‑269) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | AssemblyC74_contig_39 | 1 = | 0 (0.000) | intergenic (–/+65) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 1538 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGATTTTA > AssemblyC74_contig_31/1‑135 | ggtgaagtcgtaacaaggtagccgtatcggaaggtgcgtctggatcacctcctttctaaggaatattacggagactacacaaatagtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 1:650412‑M1/7‑1 (MQ=255)ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattatggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 2:2168026‑M1/7‑1 (MQ=255)ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 2:1167457‑M1/7‑1 (MQ=255)ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 2:1274239‑M1/7‑1 (MQ=255)ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 2:2463489‑M1/7‑1 (MQ=255)ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 2:1424514‑M1/7‑1 (MQ=255) gtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc > 2:524768‑M1/128‑134 (MQ=255) agtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGa < 1:1640610‑M1/12‑1 (MQ=255) aaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGat < 2:2366981‑M1/21‑1 (MQ=255) actctcaatttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATAttt < 1:2258165‑M1/25‑1 (MQ=255) ctctcaatttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTg > 1:761724‑M1/110‑135 (MQ=255) agccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATAttt > 1:15902‑M1/110‑134 (MQ=255) agccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTg < 2:156878‑M1/26‑1 (MQ=255) agccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTg < 2:109404‑M1/26‑1 (MQ=255) tctcaatttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGa < 1:727602‑M1/27‑1 (MQ=255) tctcaatttaaaacggggcctgagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGa > 1:858617‑M1/109‑135 (MQ=255) gccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGa < 1:1976947‑M1/27‑1 (MQ=255) gccgtatcggaaggtgcggctggatcaccacctttctaaggaatattacggagactacacactttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGatattaga < 2:312266‑M1/27‑4 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 2:164941‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 1:2294143‑M1/105‑135 (MQ=255) aatttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTa > 1:460808‑M1/105‑135 (MQ=255) tttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTaaa > 2:2424178‑M1/103‑135 (MQ=255) tcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTaaa > 1:1193443‑M1/103‑135 (MQ=255) ttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGa > 1:809857‑M1/102‑128 (MQ=255) ttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAAt < 2:606971‑M1/34‑1 (MQ=255) ttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacagtagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAAt < 1:944629‑M1/34‑1 (MQ=255) cggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 2:264104‑M1/102‑132 (MQ=255) gaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgt < 1:1046376‑M1/36‑1 (MQ=255) gaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgt < 1:1554365‑M1/36‑1 (MQ=255) aggtgccgctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgta > 2:2137139‑M1/98‑134 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:1853037‑M1/94‑135 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 1:1440865‑M1/94‑135 (MQ=255) cgtctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:1471136‑M1/93‑134 (MQ=255) cggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:194349‑M1/93‑134 (MQ=255) cggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:573731‑M1/93‑134 (MQ=255) ggctggatcacctcctttctaaggaatattacggatactacacaatttgtttttactttggtcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa < 2:176480‑M1/44‑1 (MQ=255) ggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa < 2:1810550‑M1/44‑1 (MQ=255) ggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa < 2:2529623‑M1/44‑1 (MQ=255) gctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa > 1:895849‑M1/91‑134 (MQ=255) ctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATGGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAATCCg < 2:722287‑M1/51‑1 (MQ=255) cacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAACACTGGATCTTTGAAGTAAATGTAAGTAATACAAACCga < 2:1599339‑M1/52‑1 (MQ=255) acctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCga < 1:2516683‑M1/52‑1 (MQ=255) cctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCgag < 1:509359‑M1/53‑1 (MQ=255) agctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCgaga > 2:809051‑M1/82‑135 (MQ=255) gggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTa > 2:1717598‑M1/78‑108 (MQ=255) ggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACAcc > 1:356712‑M1/77‑135 (MQ=255) gagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACcgcg < 1:1002596‑M1/62‑1 (MQ=255) ctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACcgcg < 2:1678745‑M1/62‑1 (MQ=255) aatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAAt < 2:1023358‑M1/68‑1 (MQ=255) aatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGAAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAAt < 1:609208‑M1/68‑1 (MQ=255) ttctttgcacgctggaggtcagcggttcgatcccgctaggctcaattaaaaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAAtt > 1:1374324‑M1/67‑135 (MQ=255) tgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAAtt < 1:1933993‑M1/69‑1 (MQ=255) tacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGaa > 1:1251357‑M1/63‑135 (MQ=255) caggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 1:32392‑M1/56‑135 (MQ=255) tacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 1:1161591‑M1/54‑133 (MQ=255) ggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 1:1685275‑M1/54‑134 (MQ=255) ggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 1:1878122‑M1/54‑134 (MQ=255) ggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 1:2022094‑M1/54‑134 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 2:2090488‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 2:1222101‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 1:2558896‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 2:681385‑M1/83‑1 (MQ=255) caatttgtttttcctttgttcatttttgagatgtttactctcaaacactTTTGTTCATAGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAAtt > 2:2056730‑M1/50‑135 (MQ=255) caatttgtttttactttgttcagttttgagaggtgtactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAAtt > 1:206499‑M1/50‑135 (MQ=255) aatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTg < 2:1983552‑M1/87‑1 (MQ=255) gtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa < 2:965236‑M1/91‑1 (MQ=255) gtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa < 2:866775‑M1/91‑1 (MQ=255) tttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa < 1:2402113‑M1/91‑1 (MQ=255) tttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa < 2:784658‑M1/91‑1 (MQ=255) gatcgatcccgctaggctccattaacaacattagtttttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa > 1:413063‑M1/43‑133 (MQ=255) tttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCt < 2:1912409‑M1/95‑1 (MQ=255) tttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCt < 1:1113224‑M1/95‑1 (MQ=255) cgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGaaaa < 1:1290306‑M1/15‑1 (MQ=255) tactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 1:689557‑M1/39‑118 (MQ=255) actttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGaa > 1:569388‑M1/38‑135 (MQ=255) tcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAg < 1:2109414‑M1/99‑1 (MQ=255) tttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGc < 2:2311007‑M1/100‑1 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 2:1517772‑M1/25‑133 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 1:2475301‑M1/25‑133 (MQ=255) tgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGa < 1:1338912‑M1/112‑1 (MQ=255) cattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGa < 2:226232‑M1/112‑1 (MQ=255) taacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAATCCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGAc < 1:2200967‑M1/113‑1 (MQ=255) gaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCgaga < 1:2156645‑M1/54‑1 (MQ=255) ggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc < 1:2354408‑M1/117‑1 (MQ=255) gtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc > 2:221852‑M1/18‑134 (MQ=255) gtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc > 2:910744‑M1/18‑134 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 1:1502679‑M1/122‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGGAAGTAATACAAACCGAGAACACCGCGTTGAAGTTGAAAGCTGAACAAAGTGTTTCGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 1:2435060‑M1/122‑1 (MQ=255) agttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 1:1825859‑M1/11‑119 (MQ=255) agttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATc < 2:412728‑M1/125‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGaa > 2:140099‑M1/5‑71 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGaa < 1:139991‑M1/67‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAatcttttat < 2:2013527‑M1/131‑4 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:1766386‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:363458‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:1731955‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:269511‑M1/131‑1 (MQ=255) aaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATCTTTGAtt < 2:646979‑M1/132‑1 (MQ=255) aaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATCTTTGAtt < 1:983297‑M1/132‑1 (MQ=255) tttGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATCTTTGATTTTa > 2:1341936/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGATTTTA > AssemblyC74_contig_31/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |