| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | = 3396 | 0 (0.000) | 333 (0.370) +TGATGTT |
70/244 | 0.3 | 76.0% | noncoding (118/118 nt) | rasttk_feature_creation_tool=RNA_reps_5S_rRNA | 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation |
| ? | AssemblyC74_contig_8 | 1645 = | 222 (0.900) | intergenic (‑212/‑2) | rasttk_feature_creation_tool=tRNAscan‑SE/rasttk_feature_creation_tool=tRNAscan‑SE | tRNA‑Thr‑GGT/tRNA‑Asn‑GTT | |||||
Only 100 of 1584 total aligned reads displayed.
TAAAAGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3263‑3396 | aaCACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTTAGAGTAGGACGTCGCCACGCtgatgtta < 1:2497856‑M1/134‑9 (MQ=255) aaCACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgtta < 1:391430‑M1/134‑9 (MQ=255) aaCACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgtt < 1:1106557‑M1/133‑8 (MQ=255) caccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaa > 2:1560072‑M2/1‑124 (MQ=255) tcctcagtgtGGTGGCGATAGCGAGAAGGATACACCTGTTTCCATGCCGAACTCAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGTGAGTAGGTCGTCGCCACGCttaagttatcca < 1:2531832‑M1/131‑13 (MQ=255) cacaGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccgg > 1:1406722‑M1/1‑121 (MQ=255) aGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcat > 2:1940677‑M1/1‑118 (MQ=255) tgtgGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcat > 2:1859072‑M1/1‑116 (MQ=255) tggtggCGATAGCGAGAAGGATACACCTGTTACCATGCCGAACACAGAAGTTAATCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggttt < 2:2405610‑M1/135‑22 (MQ=255) tggtggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcata < 2:2276180‑M1/132‑19 (MQ=255) ggtggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctc > 2:2245005‑M1/1‑113 (MQ=255) tggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcag > 2:244948‑M1/1‑111 (MQ=255) ggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGGGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaat < 2:1597686‑M2/135‑26 (MQ=255) ggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagt > 1:2111496‑M1/1‑110 (MQ=255) cGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttg > 1:787539‑M1/1‑108 (MQ=255) aTAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttgg < 1:999013‑M1/134‑29 (MQ=255) aTAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttgg < 1:1000521‑M1/134‑29 (MQ=255) aGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctg < 2:69924‑M1/135‑32 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgg > 1:1737110‑M1/1‑103 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgg > 2:1253554‑M1/1‑103 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgg > 2:807528‑M1/1‑103 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgg > 2:107756‑M1/1‑103 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagt > 2:584560‑M1/1‑103 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttc < 2:907606‑M2/133‑31 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttc < 2:1403717‑M2/133‑31 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttc < 2:1650712‑M2/133‑31 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttc < 2:1697856‑M2/133‑31 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagt > 2:1769979‑M1/1‑103 (MQ=255) gagaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctggga > 2:1904683‑M1/1‑101 (MQ=255) gagaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtag > 2:2475413‑M1/1‑101 (MQ=255) aaGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGAGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcg < 1:2219981‑M1/134‑37 (MQ=255) ggATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagag < 2:1504562‑M1/133‑38 (MQ=255) acacCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtt < 1:1366896‑M1/135‑44 (MQ=255) acCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgcc < 2:344551‑M1/135‑46 (MQ=255) acCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctca > 2:404036‑M1/1‑90 (MQ=255) acCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttt < 2:2173171‑M2/135‑46 (MQ=255) acCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttt < 1:484636‑M2/135‑46 (MQ=255) acCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcata < 1:943289‑M1/108‑19 (MQ=255) cTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttattttta > 2:484636‑M2/1‑88 (MQ=255) gTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttac < 1:846142‑M1/135‑50 (MQ=255) tAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatc < 2:755362‑M1/135‑51 (MQ=255) tAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatc < 1:2365485‑M1/135‑51 (MQ=255) aCCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaa < 2:1980753‑M1/134‑52 (MQ=255) aCCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatctt < 2:1377971‑M1/134‑52 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagc > 2:2025272‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaa > 2:2363224‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatg > 1:1773573‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttt > 1:1229070‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagt < 1:266252‑M2/135‑54 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagg < 1:1994423‑M2/135‑54 (MQ=255) ccATGCCGAACACAGAAGATAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCAGGGGAGAGTAGGACGTCGCCACGCaaaggcacaaagaagaactagacatagttcatcttttgtagtttaaaactgg > 2:951860‑M1/1‑82 (MQ=255) aTGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcag > 1:1917717‑M1/1‑80 (MQ=255) aTGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgat > 2:1449690‑M1/1‑80 (MQ=255) gCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgcta < 1:2316744‑M1/135‑58 (MQ=255) gCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgcta < 2:1163574‑M1/135‑58 (MQ=255) ccGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgacggttaatcatgatgtc > 2:849474‑M1/1‑77 (MQ=255) cGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcg > 1:1173846‑M1/1‑76 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 2:1735263‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt < 1:317805‑M1/135‑61 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgt > 1:349541‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagtaggtagtagcgcatgactgttaatcatgatgtcgt > 2:1212578‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttatttagttaaagaa < 1:1139039‑M2/135‑61 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaa < 1:439695‑M2/135‑61 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTCCCACAAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 2:638025‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGAGTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaa < 2:1300724‑M2/135‑61 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgt > 1:2273386‑M1/1‑75 (MQ=255) aaCACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGGTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaac > 1:1695412‑M2/1‑74 (MQ=255) acaGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgtagg > 1:1960571‑M1/1‑71 (MQ=255) aGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttatatgttttgctaagttgaact > 1:694452‑M1/1‑69 (MQ=255) aGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttc > 1:2061733‑M1/1‑66 (MQ=255) aGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgtaggttcga > 1:1527319‑M1/1‑66 (MQ=255) ttAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatag > 2:1134344‑M1/1‑64 (MQ=255) gCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatccc < 1:1036154‑M1/135‑76 (MQ=255) tAGCGCCGATTGTAGTGATGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaatatgaactagaaatatttaatctatttttgtttaaatcatatgctaatttgaactaatagattcttttat > 2:296952‑M1/1‑54 (MQ=255) tAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtca < 2:2333474‑M2/135‑82 (MQ=255) ccGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctcca < 1:1872640‑M1/135‑87 (MQ=255) ccGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctcca < 1:1253554‑M1/135‑87 (MQ=255) aTTGTAGTGAGGGGTTGACCATTGTGAGAGTCGGACGTCGCCACGCaatggcaaaaagatcaactagacagaggtattctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaat > 1:534171‑M2/1‑46 (MQ=255) aGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCataagttatccatggaggtttagctcagctgggagagcatctgccttacaaccagagggtcagcggttcgatcccgttaacctccatatgagc < 1:2143751‑M1/134‑94 (MQ=255) aGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagt > 1:1818895‑M2/1‑37 (MQ=255) ggTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgt < 1:149451‑M2/135‑102 (MQ=255) gTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagc < 2:2561017‑M1/133‑101 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagtt > 2:1335438‑M1/1‑29 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagat > 2:1033805‑M1/1‑29 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcacct > 2:2514796‑M1/1‑29 (MQ=255) ccTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttg < 1:2404347‑M1/134‑108 (MQ=255) ccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcaccta < 1:647741‑M1/134‑108 (MQ=255) cTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggt < 1:1608160‑M1/135‑110 (MQ=255) tgAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgtta > 2:525164‑M1/1‑22 (MQ=255) gagaGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagc > 1:2458676‑M1/1‑21 (MQ=255) gagaGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgtta > 1:1312211‑M1/1‑21 (MQ=255) aGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatct > 1:1570535‑M1/1‑15 (MQ=255) ggACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcgttcgattac > 1:1446713‑M2/1‑14 (MQ=255) gCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaa < 1:594395‑M1/134‑128 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaatca > 2:2074916‑M1/1‑5 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaatca > 2:1525533‑M1/1‑5 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaatca > 1:901431‑M1/1‑5 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcgttcgattactttgccat < 1:1657036‑M2/134‑130 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcgttcgattactttgccat < 2:2123404‑M2/134‑130 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcgttcgattact > 1:2092301‑M2/1‑5 (MQ=255) | TAAAAGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3263‑3396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |