| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_44 | 1 = | 0 (0.000) | 283 (0.520) | 74/258 | 1.2 | 100% | intergenic (–/+2) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/hypothetical protein |
| ? | AssemblyC74_contig_65 | = 349 | 0 (0.000) | intergenic (‑1/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | hypothetical protein/– | |||||
Only 100 of 287 total aligned reads displayed.
AAACTACCTCCCACATAATATTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_65/215‑349 | aaaCTACCTCCCACATAATATTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCa < 1:2054228/135‑1 (MQ=255)aaaCTACCTCCCACATAATATTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCa < 2:2358746/135‑1 (MQ=255) caTAATATTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaa > 2:537797‑M2/1‑122 (MQ=255) caTAATATTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaa > 1:1740749‑M2/1‑122 (MQ=255) ataataTTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaac > 2:2122005‑M2/1‑121 (MQ=255) atTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataag < 1:1844408‑M2/135‑20 (MQ=255) ttGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataagg < 1:2199195‑M2/135‑21 (MQ=255) ttGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataagg < 1:557875‑M2/135‑21 (MQ=255) tGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataagga < 1:433658‑M2/135‑22 (MQ=255) gTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttact > 2:557875‑M2/1‑108 (MQ=255) cGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcg < 2:952773‑M2/135‑32 (MQ=255) cGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcg < 1:1988739‑M2/135‑32 (MQ=255) cGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcg < 1:2440174‑M2/135‑32 (MQ=255) cGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcg < 1:1058894‑M2/135‑32 (MQ=255) cGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcc < 2:774854‑M2/112‑9 (MQ=255) cGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCAATTCAcaacttcccacaacataaggatttactttcg < 1:1747502‑M2/135‑32 (MQ=255) cGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTGCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcg < 1:1481972‑M2/135‑32 (MQ=255) gTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgt < 1:2208945‑M2/135‑33 (MQ=255) tttttCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacatcccacaacataaggatttactttcgtg < 1:2365277‑M2/135‑34 (MQ=255) ggTACGATGTCTTGTACTTGACCATTGATTTCTACACCAAACAAATCCTCACTTTCATACGTCACTGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagct > 2:1460482‑M2/1‑84 (MQ=255) ggAACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagct > 2:2322248‑M2/1‑84 (MQ=255) aCGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgt < 1:1024694‑M2/134‑54 (MQ=255) gATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttc > 2:1141376‑M2/1‑79 (MQ=255) gATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttc > 1:8192‑M2/1‑79 (MQ=255) ggCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggctttactttcgtgattttctcttttccagctgtttcaat < 1:124179‑M2/135‑60 (MQ=255) ggCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaat < 1:936962‑M2/135‑60 (MQ=255) ggCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaat < 2:417293‑M2/135‑60 (MQ=255) ggCTTGTACGTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaat > 2:1919051‑M2/1‑76 (MQ=255) gTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaa < 1:1421453‑M2/135‑65 (MQ=255) gTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaa < 1:2519346‑M2/135‑65 (MQ=255) gTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaataggaa < 2:120886‑M2/135‑65 (MQ=255) gTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgagtttatcttttccagctgtttcaatcggaa < 1:363721‑M2/135‑65 (MQ=255) aCTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaac < 1:1120058‑M2/134‑66 (MQ=255) aCTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaac < 2:363744‑M2/134‑66 (MQ=255) aCTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcacacaacctaaggatttactttcgtgattttatcttttccagctgtttcaatcggaac < 2:379074‑M2/134‑66 (MQ=255) tGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacatcaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagct > 2:2431401‑M2/1‑66 (MQ=255) tGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagct > 2:2262785‑M2/1‑66 (MQ=255) cATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgccc < 2:842323‑M2/135‑74 (MQ=255) cATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgccc < 2:658544‑M2/135‑74 (MQ=255) cATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagct > 1:2155743‑M2/1‑62 (MQ=255) cATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagct < 2:2155743‑M2/131‑70 (MQ=255) cATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcgaaacagctgccc < 2:1966012‑M2/135‑74 (MQ=255) aTTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgta < 1:745588‑M2/135‑79 (MQ=255) aTTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagct > 2:580320‑M2/1‑57 (MQ=255) aTTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttc > 2:733052‑M2/1‑57 (MQ=255) tACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttc > 1:702068‑M2/1‑52 (MQ=255) tACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttc > 1:1543320‑M2/1‑52 (MQ=255) tACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttc > 1:1224362‑M2/1‑52 (MQ=255) acCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgc > 1:223798‑M2/1‑49 (MQ=255) acCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgc < 2:1722694‑M2/135‑87 (MQ=255) cAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcat > 2:433658‑M2/1‑47 (MQ=255) cAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcat > 2:1010153‑M2/1‑47 (MQ=255) cAATCAAAGCCGCAATTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaccataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgagtaatttctgcat > 2:1566683‑M2/1‑47 (MQ=255) tCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgct > 1:136543‑M2/1‑44 (MQ=255) tCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgct > 1:1140880‑M2/1‑44 (MQ=255) tCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgct > 2:56624‑M2/1‑44 (MQ=255) tCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgct > 1:242899‑M2/1‑44 (MQ=255) tCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgct > 2:750924‑M2/1‑44 (MQ=255) aaaGCCGCCCTTTCATACGTCACTGTTCCCGTAATCCATGCActacttcccacaacataaggatttactgtcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 2:822448‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 2:925588‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 1:1403519‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 2:1844408‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 2:176868‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 1:1604403‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 1:274732‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 1:1952646‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 2:1442876‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctc < 1:1453781‑M2/134‑93 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctc < 1:2305239‑M2/134‑93 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcat > 1:777540‑M2/1‑42 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcat < 2:777540‑M2/130‑89 (MQ=255) aaaGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggaattactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctc < 2:28702‑M2/134‑93 (MQ=255) aaaGCCGCACTTTCATAAGTCTATGTTGACTTAATCCATTCActacttcccacaaaataacgatttactttagttattttatcttttccagctgtttcaatcgtaacagctgcccgtgtaatttctgcatgctct > 2:463433‑M2/1‑42 (MQ=255) gCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcg > 2:1092784‑M2/1‑39 (MQ=255) cGCACTTTCATACGTCAATGTTCCCGTAATCCATTCActaattccaacaacataaggatatactttcgtgatttgatcttttaaagctttttcaataggaacagctgcgcgtgtaatatctgcatcatctgctgt < 1:471896‑M2/135‑99 (MQ=255) cTTTCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacctaaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatac > 2:1634016‑M2/1‑33 (MQ=255) ttCATACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctcggcggtatacaa > 2:2312074‑M2/1‑31 (MQ=255) tACGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttc > 2:2002591‑M2/1‑27 (MQ=255) aCGTCACTGTTCCCGTAATCCATTCTctacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagacca > 1:1004058‑M2/1‑26 (MQ=255) aCGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagacca > 2:2058761‑M2/1‑26 (MQ=255) aCGTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagacca > 2:2448830‑M2/1‑26 (MQ=255) gTCAATGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccac < 1:2315257‑M2/134‑111 (MQ=255) tGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtctacaagaccacctc < 1:972439‑M2/132‑114 (MQ=255) tGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgac < 1:593455‑M2/135‑117 (MQ=255) tGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgac < 1:2354191‑M2/135‑117 (MQ=255) tGTTCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct > 2:1513249‑M2/1‑19 (MQ=255) ttCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactt < 2:1638687‑M2/135‑119 (MQ=255) ttCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactt < 2:2502693‑M2/135‑119 (MQ=255) ttCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactt < 1:1754864‑M2/135‑119 (MQ=255) ttCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctct < 2:1127101‑M2/110‑94 (MQ=255) tCCCGTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgacttt < 2:1248210‑M2/135‑120 (MQ=255) gTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatcc < 2:1696388‑M2/135‑124 (MQ=255) gTAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatcc > 2:1386195‑M2/1‑12 (MQ=255) tAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatcc < 1:871214‑M2/134‑124 (MQ=255) tAATCCATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatcc < 1:177580‑M2/134‑124 (MQ=255) cATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatccgtcgat < 1:459046‑M2/135‑130 (MQ=255) cATTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatccgtcgat < 1:2098956‑M2/135‑130 (MQ=255) aTTCActacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatccgtcgat < 1:338116‑M2/134‑130 (MQ=255) actacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatccgtcgatttca < 1:766772‑M2/134‑134 (MQ=255) actacttcccacaacataaggatttactttcgtgattttatcttttccagctgtttcaatcggaacagctgcccgtgtaatttctgcatgctctgcggtatacaagaccacctcgactttatccgtcgatttca < 2:1805783‑M2/134‑134 (MQ=255) | AAACTACCTCCCACATAATATTGGAACGTGCCGTTTTTCAGATCATCACTAGGTACGATGGCTTGTACTTGACCATTGATTTCTACACCAATCAAAGCCGCACTTTCATACGTCAATGTTCCCGTAATCCATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_65/215‑349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |