| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AssemblyC74_contig_15 | 32,991 | A→G | H250H (CAT→CAC) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 ← | Mobile element protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AssemblyC74_contig_15 | 32,991 | 0 | A | G | 75.7% | 2536.0 / inf | 1249 | H250H (CAT→CAC) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein |
| Reads supporting (aligned to +/- strand): ref base A (121/181); new base G (380/562); total (502/747) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1257 total aligned reads displayed.
CAACTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATCCGAGCTTTTCTTGTAAAACGC > AssemblyC74_contig_15/32859‑33123 | cAACTCATGTTATGATTTTAGAAGTAATTTATGAAAAGTTTTAATTTGTCGATTGTTCTTGGCTTGTGTAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACTGTCGAAAAACTTGTTCAAGTg < 1:1625412/135‑1 (MQ=255)cAACTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTg < 2:1691326/135‑1 (MQ=255)cAACTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTg < 2:2546188/135‑1 (MQ=255)cAACTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATg < 2:354731/135‑1 (MQ=255)cAACTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTg < 2:1033275/135‑1 (MQ=255)cAACTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTg < 1:1783061/135‑1 (MQ=255) aaCTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGAGAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAAGACGGTCGAAAAACTTGTTCAAgtgt > 1:742004/1‑135 (MQ=255) aCTCATCTTCTGATTTTAGAAGTATTTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGtt < 1:950085/135‑1 (MQ=255) aCTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGtt < 1:1427444/135‑1 (MQ=255) aCTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGtt < 1:395049/135‑1 (MQ=255) aCTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGtt < 2:1474420/135‑1 (MQ=255) aCTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGtt < 2:438103/135‑1 (MQ=255) aCTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTAGAATACGGTCGAAAAACTTGTTCAAGTGtt < 2:1609061/135‑1 (MQ=255) aCTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCGTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGtt < 2:1504248/135‑1 (MQ=255) tCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTg > 2:1666655/1‑134 (MQ=255) cATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGca > 2:2072868/1‑135 (MQ=255) cATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGca > 2:1760427/1‑135 (MQ=255) cATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGca > 1:547940/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 2:1274922/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 2:1080416/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 1:1231407/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 1:513430/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 2:2015695/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 2:2158866/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 1:2209690/1‑135 (MQ=255) aTCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcac > 2:947424/1‑135 (MQ=255) tcttctGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGcaca < 2:124931/135‑1 (MQ=255) cttctGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACaa > 1:2380496/1‑135 (MQ=255) ctGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAatat > 1:86958/1‑135 (MQ=255) ttAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGc > 2:719065/1‑135 (MQ=255) ttAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGc < 2:2184187/135‑1 (MQ=255) ttAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGc > 1:2172460/1‑135 (MQ=255) gTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCAAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCa < 1:684022/134‑1 (MQ=255) tATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAAtgatga < 1:2504227/135‑1 (MQ=255) tttCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGtt > 2:2493610/1‑98 (MQ=255) ttCAATTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCAtt < 1:1725825/134‑1 (MQ=255) aaTTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGa < 1:1689412/135‑1 (MQ=255) aaTTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGa < 2:1185065/135‑1 (MQ=255) aaTTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTAGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGa < 1:2090416/135‑1 (MQ=255) aaTTGTCGATAGTACTTGGCTTGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGa < 2:811105/135‑1 (MQ=255) gATAGTACTTGGCTTGTGAAGCATCTTTTAGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCAc < 2:2272160/134‑1 (MQ=255) aGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCtt > 1:1382486/1‑135 (MQ=255) tGGCTTGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTa < 1:1837578/135‑1 (MQ=255) gCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAAt > 2:478065/1‑135 (MQ=255) ttGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGa > 2:121664/1‑135 (MQ=255) ttGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGa > 1:187660/1‑115 (MQ=255) ttGTGAAGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGa > 2:395677/1‑135 (MQ=255) ttGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGa > 2:184647/1‑135 (MQ=255) ttGTGAAGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGa > 2:605947/1‑135 (MQ=255) gtgAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGaaa < 1:2138371/135‑1 (MQ=255) aaGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAAt > 2:1565598/1‑135 (MQ=255) aaGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAAt > 1:1930128/1‑135 (MQ=255) aaGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGc > 1:1492457/1‑84 (MQ=255) aaGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAAt > 1:1088058/1‑135 (MQ=255) aaGCATCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAAt > 2:519865/1‑135 (MQ=255) aaGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGaaaa > 1:901183/1‑133 (MQ=255) aaGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAAt > 2:1967939/1‑135 (MQ=255) aaGCATCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAAt > 1:2034664/1‑135 (MQ=255) gcatCTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATaa < 2:1791749/132‑1 (MQ=255) gcatCTTTTCGATCCAACTGCTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATaa < 1:286435/132‑1 (MQ=255) gCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATaa < 1:649745/135‑1 (MQ=255) gCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATaa < 2:762336/135‑1 (MQ=255) gCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATaa < 1:1546019/135‑1 (MQ=255) gCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATaa < 1:226540/135‑1 (MQ=255) tCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAg < 1:2317102/133‑1 (MQ=255) cTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCTAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAgggg > 1:1111001/1‑135 (MQ=255) cTTTTCGATCCAACTGTTTCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAgggg > 2:2207031/1‑135 (MQ=255) ttttGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCa > 2:306852/1‑135 (MQ=255) ttttGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCa < 1:581772/135‑1 (MQ=255) ttttGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCa > 1:345831/1‑135 (MQ=255) tGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTc > 1:1583624/1‑135 (MQ=255) tGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTc > 1:1983127/1‑135 (MQ=255) cAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATc < 1:1460943/135‑1 (MQ=255) gctgctTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGaaaa < 1:43087/115‑1 (MQ=255) actgctTCATCACGCGTTTTCGAATACTGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCtg < 1:1008332/134‑1 (MQ=255) gctTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCtg < 2:2446471/132‑1 (MQ=255) tttCATCACGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGAc > 2:903443/2‑135 (MQ=255) ctTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGa > 2:241428/1‑88 (MQ=255) ctTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGAc < 2:554961/135‑1 (MQ=255) tcatcaCGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACa < 2:1364154/134‑1 (MQ=255) tcatcaCGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACa < 2:1871672/134‑1 (MQ=255) tcaCGCGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGt < 1:788640/135‑1 (MQ=255) cGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGa < 2:2318707/135‑1 (MQ=255) cGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGa < 1:1274922/135‑1 (MQ=255) cGTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGa < 2:2362935/135‑1 (MQ=255) cGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCg > 1:471876/1‑134 (MQ=255) gTTTTCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTACTGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGa > 1:2421515/1‑134 (MQ=255) ttttCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAAc < 1:2528892/135‑1 (MQ=255) tttCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGaaaa < 1:117728/98‑1 (MQ=255) tCGAATACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAAcccc < 1:1337657/135‑1 (MQ=255) tACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATcc < 1:1966340/135‑1 (MQ=255) tACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATcc < 2:1397175/135‑1 (MQ=255) tACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATcc < 2:1448386/135‑1 (MQ=255) tACGGTCGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATcc < 2:1122587/135‑1 (MQ=255) tACGGTCGAAAAACTAGGTCCAGTGTTGCACAATATGGAAGCGCTCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACCATGTAGCGAACCCCCCTcc < 2:1913360/135‑1 (MQ=255) cGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATCCGAGCtg > 2:870136/1‑134 (MQ=255) cGAAAAACTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATCCGAGCtg > 1:2351992/1‑134 (MQ=255) aaaaaCTTGTTCAAGTGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATCCGAGCtg > 1:1039951/1‑132 (MQ=255) aaaaaCTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTa < 1:997502/76‑1 (MQ=255) ttCAAGTGTTGCACAATATGGAAGCAATCAATGATGATTTGTGCATTTGGAAAGCACACTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATCCGAGCTGTTCTTGTaaaa < 2:65531/135‑1 (MQ=255) | CAACTCATCTTCTGATTTTAGAAGTAATTTATGCAAAGATTTCAATTGTCGATAGTACTTGGCTTGTGAAGCGTCTTTTTGATCCAGCTGCTTCATCACACGTTTTCGAATACGGTCGAAAAACTTGTTCAAATGTTGCACAATATGGAAGCGATCAATGATGATTTGTGCATTTGGAAAGCACTCTTTGACTAATGAAAAATAAGGGGCATTCATATCTGTGACAATGTAGCGAACCCCCATCCGAGCTTTTCTTGTAAAACGC > AssemblyC74_contig_15/32859‑33123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |