| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | 1 = | 0 (0.000) | 1004 (0.550) +AGTGT |
133/246 | 0.6 | 100% | intergenic (–/‑269) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | AssemblyC74_contig_39 | 1 = | 0 (0.000) | intergenic (–/+65) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 1131 total aligned reads displayed.
AATCAAAGATTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_31/132‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAATCATCTA > AssemblyC74_contig_39/1‑134 ||||| AATCAAAGATTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGT < 2:1710345/135‑1 ATCACAGATTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTG < 2:2784573/135‑1 ATCAAAGCTTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTG < 2:1192746/135‑1 ATCAAAGATTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTG < 2:178336/135‑1 ATCAAAGATTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTG < 1:2567949/135‑1 ATCAAAGATTTTATGGCCGTCCGCCTATTTAGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTG < 1:1093358/135‑1 aatATTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATACAAAGCGGTGTTCTCGGTTTGTATTACTTACATTTACTGCAAATATCCAGTTTTCAATGACCAAAAGTGTTTG > 2:100991/4‑135 TTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGT < 2:1419350/135‑1 TTTATGGCCGACCGCCTATTTTGCTTCAGGCAAAACAATTTGTTCAGCTTTCAAATTCAACGCGGGGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGT < 2:1291350/135‑1 ATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAA > 1:707997/1‑134 GGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACC < 1:1046655/135‑1 GGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACC < 2:2585336/135‑1 GGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACC < 1:2105615/135‑1 GGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAAC > 2:2263212/1‑134 GGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAAC > 2:2046099/1‑134 GCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAA > 2:2507359/1‑133 GCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAA > 1:441724/1‑133 GCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAA > 2:526766/1‑133 TTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGT > 1:784038/1‑135 CAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAA > 1:1685655/1‑135 CAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAA > 1:323018/1‑135 AGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAA > 1:1424389/1‑135 TAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAA < 2:1124949/133‑1 TAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAA < 1:760754/132‑1 TAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTG < 1:1751915/95‑1 CAATTTGTTCAGCTTTCAAATTCACCGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATT < 2:2734157/135‑1 AATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTG > 2:694955/1‑135 AATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTG > 2:2565117/1‑135 TTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACACAGTAAAAACAAATTGTGT < 2:1481789/135‑1 TTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGT < 2:2477109/135‑1 GTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAG < 2:2705367/135‑1 GTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAG < 2:2620177/135‑1 GTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTA > 1:1151281/1‑134 GTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTA > 1:2887446/1‑134 GTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTA > 2:330396/1‑134 GTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGT > 2:1928731/1‑133 TTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTA > 1:2732062/1‑133 TCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGT > 1:531282/1‑134 GCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCC > 2:2181898/1‑135 GCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCC > 2:2858327/1‑135 TTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTA < 2:2419576/135‑1 CAAATTCACCGCGGTGTTCTCGGTTTGTAATACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAAT < 1:2338713/135‑1 agTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATT < 1:1217175/133‑1 ATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATT < 1:507116/135‑1 ACGCGGTGTTCTCGGTTTGTATTACTTACATTTCCTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTA < 2:1643411/135‑1 ACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTA < 1:2152521/135‑1 CGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAG < 2:2213665/135‑1 GGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAA > 1:2762220/1‑135 GGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTG > 1:1331622/1‑88 CTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGT < 1:157553/135‑1 CTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGG < 1:596093/134‑1 TCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTG < 2:2089134/135‑1 GTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATC > 2:752204/1‑135 TTGTATTACTTACATTTACTTCAAATACCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCC > 2:457664/1‑134 caatcACTCACATTTACTTCAACTATCCAGTTTACAATGAACAAAAGAGTTTGAGACTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGC < 1:2463219/130‑1 TATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCC < 2:1045331/135‑1 TATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGC > 1:2503212/1‑134 TATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGC > 2:1071138/1‑134 TATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCAGTAATATTACTTAGAAAGGAGGTGATCCAGC > 1:1521853/1‑134 TATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGT > 1:2412182/1‑47 TTACTTACATTTACTTCAAATATCCAGTTTTCCATGAACAAAAGTGTTTGAGAGTAAACCACTCAAAACTGAACAAAGTAAAAACATATTGTGTAGAGTCCGTAATATTCCTTAGAAAGGAGGTGATCAAGCCG > 2:821905/1‑134 TTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTTTAGTCTCCGTAATATTACTTAGAAAGGAGGTGATCCAGCCG > 1:1971509/1‑134 TTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCG > 2:1574121/1‑134 TTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCG > 1:2194895/1‑134 CTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACC > 1:669719/1‑135 TACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCT > 1:414011/1‑134 TACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCT > 2:588110/1‑134 TACATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCT > 2:1240469/1‑134 ACATTTACTTCATATATCCAGTGTTCAATGAACATAAGTGTTTGAGAGTAAACCTCACAAAACTGAACATAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTC < 1:1921938/135‑1 ACATTTACTGCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTC > 2:2147903/1‑135 CATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCC > 2:633935/1‑135 ATTTACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCG < 1:925761/135‑1 TACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATA > 1:1466496/1‑135 TACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATA < 1:2613671/135‑1 TACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATA > 2:1353531/1‑135 ACTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATAC < 1:1882459/135‑1 CTTCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATAC > 1:1825989/1‑134 TCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGC < 2:1847192/135‑1 TCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGC < 1:1649120/135‑1 TCAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGC > 1:831059/1‑135 CAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCT < 1:376987/135‑1 CAAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGC > 1:87367/1‑134 AAATATCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCT > 1:2040093/1‑134 cCCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTG < 1:124415/134‑1 TCCAGTTTTCACTGAACAAAAGTGATTGAGAGAAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTG < 1:226582/135‑1 CCAGTTTTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGT < 1:1001240/135‑1 TTCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGA < 2:397774/134‑1 TCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACT < 2:1749461/135‑1 TCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACT < 2:1663615/135‑1 TCAATGAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGAC > 1:2217485/1‑134 taaaAAAAGTGTTTTATAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCAGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACC < 2:784885/131‑1 GAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACC < 1:97423/135‑1 GAACAAAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACC < 2:2313022/135‑1 GAACAAAAGCGTTTGAGAGTAAACCACTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACC < 2:2662598/135‑1 AAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAAT < 2:893509/135‑1 AAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAAT < 2:938252/135‑1 AAAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAAT < 2:152757/135‑1 AAGTGTTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAATC < 1:2837966/135‑1 TTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAATCATCTA < 2:2004235/135‑1 TTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAATCATC < 1:2678938/133‑1 ||||| AATCAAAGATTTTATGGCCGTCCGCCTATTTTGCTTCAGGCTAAACAATTTGTTCAGCTTTCAAATTCAACGCGGTGTTCTCGGTTTGTATTACTTACATTTACTTCAAATATCCAGTTTTCAATGAACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_31/132‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAATCATCTA > AssemblyC74_contig_39/1‑134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |