| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_44 | 1 = | 0 (0.000) | 305 (0.510) | 76/256 | 0.9 | 100% | intergenic (–/+2) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/hypothetical protein |
| ? | AssemblyC74_contig_65 | = 349 | 0 (0.000) | intergenic (‑1/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | hypothetical protein/– | |||||
Only 100 of 305 total aligned reads displayed.
TGAAATCGACGGATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_44/133‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATGTGGGAGGT < AssemblyC74_contig_65/349‑220 TGAAATCGACGGATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGT < 2:1367924/134‑1TGAAATCGACGGATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGT < 1:2627722/134‑1TGAAATCGACGGATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGT < 1:499697/134‑1TGAAATCGACGGATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGT < 1:835867/134‑1 TCGACGGATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGG > 1:2757611/1‑135 ATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGG > 2:145585/1‑135 AAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGA < 1:1822818/135‑1 AAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAA < 2:2869446/135‑1 AAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAA > 2:1046811/1‑135 GTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAACTCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACA < 2:1027403/135‑1 GTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACA < 1:1252093/135‑1 GTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGAC < 2:1322503/134‑1 TGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGT > 2:366408/1‑135 TGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATAGAAAAAGATGGAAAAGAGAAAATCACGAAAGTAAATCCTTATGGTGTGGGAAGTCGTGAATGGATTACGGGAACATTGACGT > 2:274205/1‑135 GGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTACGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTA > 1:1235056/1‑135 TGTATACCGCAGAGCATGCAGATATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAATGTTAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAt < 2:2498923/135‑2 TGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAA < 2:2244797/135‑1 TGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAA < 1:743190/135‑1 TGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAA < 2:605479/135‑1 TGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAA < 2:855421/135‑1 ACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATACAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCG < 2:2179248/135‑1 ACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCG < 1:1639232/135‑1 ACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCG < 1:225180/135‑1 CGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAACAAGCAGGAAAAGATAAAATCACGAAAGTAAATCATTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGC > 2:2446468/1‑135 CGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAATATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGC > 1:979031/1‑135 CGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGAT < 2:952681/105‑1 CGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGAT > 1:952681/1‑105 AGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCTGCTTT > 2:1746419/1‑135 AGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT > 1:1419595/1‑135 AGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT > 1:881517/1‑135 AGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT > 1:1723040/1‑135 AGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT > 1:2816299/1‑135 AGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT > 2:1710412/1‑135 AGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAA < 1:1165353/125‑1 GAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT < 1:2704621/134‑1 GAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT < 2:67869/134‑1 GAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT < 2:1842044/134‑1 GAGCATGCAGAAATTACACGGGCAGCTGCTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTT < 2:492859/134‑1 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA > 1:2307817/1‑135 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA > 2:1627961/1‑135 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA > 2:1433735/1‑135 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA > 2:1383445/1‑135 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA > 2:1167626/1‑135 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA > 1:93303/1‑135 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA > 1:2097206/1‑135 AGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACA < 1:1838998/110‑1 AGCATGCAGAAATTACAAGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGTATTACGGTAACATTGACTTATGAAAGTGCGGCTTTta > 2:737157/1‑133 ATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTG > 2:2568026/1‑135 ATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTG > 2:2651702/1‑135 ATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTG > 2:325954/1‑135 ATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTG > 1:2158179/1‑135 ATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTG > 1:533365/1‑135 ATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTG > 1:677303/1‑135 TACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAAT < 2:2102181/135‑1 TACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAAT < 1:1871442/135‑1 TACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAAT < 2:673715/135‑1 TACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAAT < 2:908837/135‑1 TACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAAT < 1:2879329/135‑1 TACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAAT < 2:2190726/135‑1 ACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATC > 2:1910840/1‑135 CGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAAT < 1:1282935/135‑1 GGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATG < 2:1852131/135‑1 GGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATG < 1:2568026/135‑1 gcTCCGATAGAACCAGCTGGAACATCTAAACTCACGAAAGTAAATCCTTCAGTTGGGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGT < 1:2413696/132‑1 GTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGT < 2:2779639/134‑1 GTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGT < 1:1196188/134‑1 GTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAA < 1:2868551/132‑1 GATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGC < 2:283369/135‑1 ATTGAAACAGCTTGAAAAGATCAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCC < 1:2553512/135‑1 ATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCC > 2:1671834/1‑135 ATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCC < 2:1285209/135‑1 ATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCC < 2:524200/135‑1 ATTGAAAAAGCTACAAAAGATGAAATCACGAAAGTACATCCTTATGTTGTTGGAACTAGTGAATGGATTACGGGAACACTGACGTATGTAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCC < 2:1601019/135‑1 GAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATC > 1:1077699/1‑135 ACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGT < 1:1365696/134‑1 AGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAATTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAATCCATCGTACC > 1:1016827/1‑135 GAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTG > 1:2647983/1‑135 GAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGCCTATGATTGGTGTAGAAATAAATTGTAAAGTACAATCAATCGTACCTAGTG > 1:1302737/1‑135 CGAAAGTAAATCCTTCTGTTGTAGGAATTAGTCAATCGATTACGGGAACAATGTCGTATGGAAGTGCGGCTTTGATTGTTGTAGAATTCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACG < 1:2472365/135‑1 CGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACG < 2:2355895/135‑1 CGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACG < 1:1046810/135‑1 CGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACG < 1:642091/135‑1 CGAAAGTAAATCCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACG < 1:2000038/135‑1 CCTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATTATCTGAAAAACGGCACGTTCCAA < 1:2446468/135‑1 CTTATGTTGTGGGATTTTGTGAATTGATGACGTTAACAGTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAAT < 1:2297251/135‑1 CTTATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAAT < 1:1609043/135‑1 TATGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATAT < 1:1527989/135‑1 TGTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAA > 1:1486408/1‑47 GTTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAAT < 1:16921/71‑1 TTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATG > 2:1101302/1‑135 TTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATG > 1:1857114/1‑135 TTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATG > 2:2601720/1‑135 TTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATG > 2:2520947/1‑135 TTGTGGGAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGA < 1:365749/57‑1 GAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATGTGGGAG > 1:570680/1‑135 GAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATGTGGGAG > 2:1508672/1‑135 GAAGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATGTGGGAG > 2:2013528/1‑135 AGTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATGTGGGAGGT > 2:782903/1‑135 GTAGTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATGTGGGAGGT < 2:1235056/134‑1 GTGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCAT > 2:2678753/1‑79 TGAAATCGACGGATAAAGTCGAGGTGGTCTTGTATACCGCAGAGCATGCAGAAATTACACGGGCAGCTGTTCCGATTGAAACAGCTGGAAAAGATAAAATCACGAAAGTAAATCCTTATGTTGTGGGAAGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_44/133‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAATGGATTACGGGAACATTGACGTATGAAAGTGCGGCTTTGATTGGTGTAGAAATCAATGGTCAAGTACAAGCCATCGTACCTAGTGATGATCTGAAAAACGGCACGTTCCAATATTATGTGGGAGGT < AssemblyC74_contig_65/349‑220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |