BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AssemblyC74_contig_1	443402 =	1089 (3.490)	230 (0.800)	65/256	1.0	29.7%	intergenic (+531/–)	rasttk_feature_annotation_tool=annotate_proteins_si milarity/–	Conserved hypothetical protein ArsC related/–
*	?	AssemblyC74_contig_6	= 168934	0 (0.000)	230 (0.800)	65/256	1.0	29.7%	intergenic (+543/–)	rasttk_feature_annotation_tool=annotate_proteins_km er_v2/–	Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)/–

Only 100 of 1367 total aligned reads displayed.

TGAGTTGCTGTAAGATTTCGAAAAACGAAAT‑C‑AAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑  >  AssemblyC74_contig_1/443268‑443529

   gTTGCTGTAAGATTTCGAAAAACGAAAT‑C‑AAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAg                                                                                                                                      >  1:1262693/1‑134 (MQ=255)

   gTTGCTGTAAGATTTCGAAAAACGAAAT‑C‑AAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAg                                                                                                                                      >  2:1201558/1‑134 (MQ=255)

       ccgaaaGATTTCGAAAAACGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCtt                                                                                                                                 >  2:1249147/5‑135 (MQ=11)

       cTGTAAGATTTCGAAAAACGAAAT‑C‑AAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCtt                                                                                                                                 >  2:2338458/1‑135 (MQ=255)

       cTGAAAGATTTCGAAAAACGAAAT‑CGAAAAAAACTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCt                                                                                                                                  >  1:1226488/1‑135 (MQ=11)

          gaaGATTTCGAAAAACGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGa                                                                                                                              <  1:614442/134‑1 (MQ=255)

            agatgatatgataatcaagtcgctgctaatgagtggcaaagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGa                                                                                                                              <  2:1715650‑M1/11‑1 (MQ=255)

               tttCGAAAAACGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACt                                                                                                                         <  2:2520234/135‑1 (MQ=255)

                ttCTAAAAAAGAAATAG‑AAAAAAAATTTTAAAAAAGAGTTGACAATCGTTTGTCTCTCTGATATGATATAAAAGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACt                                                                                                                         <  1:2642707/135‑1 (MQ=14)

                ttCGAAAAACGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACt                                                                                                                         <  1:1050693/134‑1 (MQ=255)

                ttCGAAAAACGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACt                                                                                                                         <  1:407039/134‑1 (MQ=255)

                ttCGAAAAACGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACt                                                                                                                         <  1:1395724/134‑1 (MQ=255)

                ttCGAAAAACGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACt                                                                                                                         <  1:891698/134‑1 (MQ=255)

                ttCGAAAAACGAAAT‑C‑AAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGACTCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACt                                                                                                                         <  1:29320/134‑1 (MQ=255)

                 atatgataatcaagtcgctgctaatgagtggcaaagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataatattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACt                                                                                                                         <  2:756183‑M1/16‑1 (MQ=255)

                 atatgataatcaagtcgctgctaatgagtggcaaagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACt                                                                                                                         >  1:2073187‑M1/120‑135 (MQ=255)

                    aaaaaCGAAAT‑CGAAAAAAACTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAAc                                                                                                                     >  1:71600/1‑135 (MQ=17)

                    aaaaaCGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACa                                                                                                                    >  2:2071527/1‑135 (MQ=255)

                    aaaaaCGAAAT‑C‑AAAAAAACTTTAAAAAAAGAGTTGACAATTACTTGTCTCACTGATATGATATAAAAGTAGCAACGGCAGCCAAAAACGAAACGGGGAACACTCCGGATGAAGTAGACCTTTCAAAACTGAACa                                                                                                                    >  1:336852/1‑135 (MQ=17)

                         cGAAAT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTa                                                                                                               <  2:86358/135‑1 (MQ=255)

                             aT‑C‑GAAAAAACTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGa                                                                                                            <  1:1755405/134‑1 (MQ=17)

                                tcgaaaaaaCTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACa                                                                                                          <  1:491314/132‑1 (MQ=255)

                                 gctgctaatgagtggcaaagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACa                                                                                                          <  1:2535570‑M1/31‑1 (MQ=255)

                                  gaaaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACaaa                                                                                                        <  1:463611/134‑1 (MQ=18)

                                  aaaaaaaCTTTTAAAAAAGAGTTGACAATCGTTTGTCTCTCTGATATGATATAAAAGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACaaa                                                                                                        <  2:2799955/135‑1 (MQ=18)

                                  aaaaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACaaa                                                                                                        <  2:1539586/135‑1 (MQ=18)

                                   aaaaaaCTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  2:522297/135‑1 (MQ=255)

                                   aaaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  2:1578650/135‑1 (MQ=18)

                                   aaaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  2:107840/135‑1 (MQ=18)

                                   aaaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  2:1934720/135‑1 (MQ=18)

                                   aaaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  1:841765/135‑1 (MQ=18)

                                    aaaaaCTTTTAAAAAAGAGTTGACAATCGTTTGTCTCTCTGATATGATATAAAAGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACaaa                                                                                                        <  2:38126/133‑1 (MQ=18)

                                    aaaaaCTTTTAAAAAAGAGTTGACAATCGTTTGTCTCTCTGATATGATATAAAAGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  2:2245593/134‑1 (MQ=18)

                                    aaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  2:1866661/134‑1 (MQ=18)

                                    aaaaaCTTTTAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAAc                                                                                                       <  1:2019353/134‑1 (MQ=18)

                                             tAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTa                                                                                             <  2:2922172/135‑1 (MQ=255)

                                             tAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTa                                                                                             <  1:2831335/135‑1 (MQ=255)

                                             tAAAAAAGAGTTGACAATCGTTTGTCTCTCTGATATGATATAAAAGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTa                                                                                             <  2:1775026/135‑1 (MQ=21)

                                             tAAAAAAGAGTTGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTa                                                                                             <  2:2570805/135‑1 (MQ=21)

                                                caaagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACt                                                                                                                         <  2:319717‑M1/16‑1 (MQ=255)

                                                caaagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAggg                                                                                          <  2:2872594‑M1/47‑1 (MQ=255)

                                                caaagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAggg                                                                                          <  2:2748267‑M1/47‑1 (MQ=255)

                                                  aagacgtttagaaaaaataaacaaagcagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACACAGTAAGTCAAACCAAATGTGTAGGGCg                                                                                        >  2:926747‑M1/87‑135 (MQ=255)

                                                  aagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGc                                                                                         <  1:212283‑M1/48‑1 (MQ=255)

                                                  aagacgtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGc                                                                                         <  1:178901‑M1/48‑1 (MQ=255)

                                                  aaGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCg                                                                                        <  1:1186773/135‑1 (MQ=255)

                                                       ttGACAATCGCTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCt                                                                                     <  2:1034787/133‑1 (MQ=25)

                                                       ttGACAATAGCTTGTCTCTCTGATATGATATAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACAATCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCACATGTGTAGGGCGTCt                                                                                     <  2:1119845/133‑1 (MQ=25)

                                                       gtttagaaaaaataaacaaagaagttgttgacattctcttctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTg                                                                                   >  2:2028541‑M1/82‑135 (MQ=255)

                                                                  ttGTCTCTCTGATATGATATAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGGAGGGCGACTTGAttcaattcaa                                                                        >  2:1479667/1‑135 (MQ=25)

                                                                    gTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGa                                                                      >  1:2224177/1‑135 (MQ=255)

                                                                    gTCTCTCTGATATGATATAAAAGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTg                                                                                   <  1:1537984/122‑1 (MQ=25)

                                                                       tctctGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGacaa                                                                   <  1:1889126/135‑1 (MQ=255)

                                                                            gatatgatatAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACaacaaac                                                              >  2:1661664/1‑135 (MQ=255)

                                                                            gatatgatatAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAAAACTCCCGATGAAGTAGACCTTTGAAAACTGAAAAAAGTAAGACAAACCAAAAGTGTAGGGCGTCTTGATTCAAATCAATACaacaaac                                                              >  2:1305613/1‑135 (MQ=37)

                                                                                 gatatAAAAGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttt                                                         <  1:2885446/135‑1 (MQ=255)

                                                                                 gatatAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttt                                                         <  1:1947810/135‑1 (MQ=255)

                                                                                 gatatAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttt                                                         <  1:562401/135‑1 (MQ=255)

                                                                                  atatAAAAGTTGCTACAGCAGCCAAAAACGAATCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAttttt                                                        <  2:411493/135‑1 (MQ=255)

                                                                                      aaaaGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAATACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAAc                                                    >  2:2157554/1‑135 (MQ=255)

                                                                                      aaaaGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAAc                                                    >  1:1150879/1‑135 (MQ=255)

                                                                                      aaaaGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAAc                                                    >  1:37082/1‑135 (MQ=255)

                                                                                      aaaaGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAAc                                                    >  2:1359502/1‑135 (MQ=255)

                                                                                       aaaGTTGCTACGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACCAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAAcaa                                                  <  1:1696409/135‑1 (MQ=255)

                                                                                        aaGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAAcaag                                                 >  2:2825895/1‑135 (MQ=39)

                                                                                        aaGTTGCTACGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAAcaag                                                 >  1:783157/1‑135 (MQ=39)

                                                                                        aaGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAATCCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttt                                                         >  2:591659/1‑128 (MQ=255)

                                                                                        aaGTTGCTACGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACATTTGAAAACTGAACAAAGTAAGACAAACCAAATGTTTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAAcaag                                                 >  2:630261/1‑135 (MQ=38)

                                                                                         tctcttctgaatctgataagattaaagagtttttgaaacaaaaagatTAGAACTTTGAAAACTGAACAATGTAAGACAAACCAAATGTGTTGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTT‑AAcaagc                                                >  1:2482639‑M1/48‑135 (MQ=255)

                                                                                              tctgaatctgataagattaaagagttgttgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTT‑AACAagcaagca                                           >  1:1835362‑M1/43‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat                                         >  1:2415728/1‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat                                         >  1:1103491/1‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat                                         >  2:1153932/1‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAAAAAAGTAATACAAACCAAATGTGTAGGGCGTCTTGATACAATTCAAGACAACAAA‑AATTTTTAACAATAAAGCAat                                         >  1:1478127/1‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTGTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat                                         >  2:1973892/1‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAgcaagcaa                                          >  1:2357584/1‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat                                         >  1:259694/1‑135 (MQ=255)

                                                                                                aCGGCAGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAat                                         >  1:1647336/1‑135 (MQ=255)

                                                                                                aCGGAAGCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAat                                         >  1:2281011/1‑135 (MQ=255)

                                                                                                     aGCCAAAAACGAATCGGGAAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGc                                     <  1:158825/134‑1 (MQ=255)

                                                                                                      gCCAAAAATGAATCGGGAAACACTCTCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCt                                    >  1:2707829/1‑134 (MQ=255)

                                                                                                       ccAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCt                                    >  2:2446612/1‑134 (MQ=255)

                                                                                                                 aTCGGGAAACACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACAtttttaaca                                                    <  2:2619822/108‑5 (MQ=255)

                                                                                                                    gggaAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTg                       >  2:804961/1‑133 (MQ=255)

                                                                                                                        aaCACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt                  <  1:2441531/134‑1 (MQ=255)

                                                                                                                        aaCACTCCCGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt                  <  2:71306/134‑1 (MQ=255)

                                                                                                                         acacTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCtt                  <  1:1004498/134‑1 (MQ=255)

                                                                                                                          tgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTT‑AACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAAc               <  2:249664‑M1/121‑1 (MQ=255)

                                                                                                                          tgaaacaaaaagatTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTT‑AACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAAc               <  2:1416824‑M1/121‑1 (MQ=255)

                                                                                                                          cacTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAAc               >  2:464832/1‑135 (MQ=255)

                                                                                                                              ccTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCACTATGCTAGCAAACAAATTGAGCTTAACAAt            >  2:2387291/1‑135 (MQ=255)

                                                                                                                                 gatgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGca        >  2:1626974‑M1/1‑133 (MQ=255)

                                                                                                                                  atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa       >  1:1320376‑M1/1‑132 (MQ=255)

                                                                                                                                  atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa       >  1:2776022‑M1/1‑132 (MQ=255)

                                                                                                                                  atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGta        >  2:2651846/1‑134 (MQ=255)

                                                                                                                                  atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa       >  1:1967121‑M1/1‑132 (MQ=255)

                                                                                                                                  atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa       >  1:2182424‑M1/1‑132 (MQ=255)

                                                                                                                                     aaGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaaga     >  1:9818‑M1/1‑130 (MQ=255)

                                                                                                                                      attagACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagatt   >  1:672799‑M1/3‑128 (MQ=255)

                                                                                                                                       gTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattg  >  2:1815868‑M1/1‑127 (MQ=255)

TGAGTTGCTGTAAGATTTCGAAAAACGAAAT‑C‑AAAAAAACTTTTAAAAAAGAGTTGACAATTACTTGTCTCTCTGATATGATATAAAAGTTGCTACGGCAGCCAAAAACGAATCGGGGAACACTCCTGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑  >  AssemblyC74_contig_1/443268‑443529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.