| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_26 | 1 = | 0 (0.000) | 217 (0.440) | 69/256 | 1.0 | 100% | intergenic (–/‑20) | –/rasttk_feature_creation_tool=tRNAscan‑SE | –/tRNA‑Pro‑TGG |
| ? | AssemblyC74_contig_54 | = 611 | 0 (0.000) | intergenic (+1/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Arg‑ACG/– | |||||
Only 100 of 239 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAATT > AssemblyC74_contig_26/1‑135 | gcggtgagtgatcaccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGtctgt < 2:2328943‑M1/7‑3 (MQ=255)gcggtgagtgatcaccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCttt < 2:2378067‑M1/7‑1 (MQ=255) gtgagtgatcaccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCtttttt < 1:1004680‑M1/10‑1 (MQ=255) atcaccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCttttttatttttt > 2:609503‑M1/119‑135 (MQ=255) atcaccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCttttttatttttt > 2:1683866‑M1/119‑135 (MQ=255) atcaccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCttttttatttttt > 1:667780‑M1/119‑135 (MQ=255) caccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCttttttatttttta < 2:1709190‑M1/18‑1 (MQ=255) caccgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTaa > 2:2638460‑M1/117‑135 (MQ=255) caccgtaccggttcgattccggtcctcggcatttcaaatatgcgccaatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTaa > 2:2627547‑M1/117‑135 (MQ=255) caccgtaccggttcgattccggtcctcggcatgtcaaatatgcgcccatagctcaactggatagagtgtttgactacggataaaaaggttaggggttagactcctcttgggcgagtAGTCttttttatttttta > 1:890594‑M1/117‑134 (MQ=255) cgtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACg > 2:1914801‑M1/114‑135 (MQ=255) gtaccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACgg < 1:986410‑M1/23‑1 (MQ=255) taccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACggg > 2:2706069‑M1/112‑135 (MQ=255) ccggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGaa < 1:2028398‑M1/26‑1 (MQ=255) cggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAg > 1:85902‑M1/109‑135 (MQ=255) cggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAg > 2:1929238‑M1/109‑135 (MQ=255) cggttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAg > 2:1042478‑M1/109‑135 (MQ=255) gttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTa > 2:2710817‑M1/107‑135 (MQ=255) gttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTa > 2:1741199‑M1/107‑135 (MQ=255) gttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTa > 1:654042‑M1/107‑135 (MQ=255) gttcgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTa > 1:2065602‑M1/107‑135 (MQ=255) cgattccggtcctctgcatttcaaatatgcgcccatagctcaactgtatagagtttttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCt > 2:2202148‑M1/104‑135 (MQ=255) cgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCt > 2:279512‑M1/104‑135 (MQ=255) cgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCt > 2:593050‑M1/104‑135 (MQ=255) cgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCt > 1:572768‑M1/104‑135 (MQ=255) cgattccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTATTTTATTTTTTAAACGGGAAGTAGCt > 1:375444‑M1/104‑135 (MQ=255) attccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCa > 2:2028398‑M1/102‑135 (MQ=255) attccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCa > 1:1709190‑M1/102‑135 (MQ=255) attccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCa > 1:1388008‑M1/102‑135 (MQ=255) attccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCa > 1:2704860‑M1/102‑135 (MQ=255) attccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCa > 2:332273‑M1/102‑135 (MQ=255) ttccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcgtcttgggcgcgtAGTCTGGTTTATGTTTTAAACGGGTAGTAGCTCAg < 1:1200020‑M1/35‑1 (MQ=255) ccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTa < 1:2167699‑M1/29‑1 (MQ=255) ccggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTa > 2:2167687‑M1/99‑127 (MQ=255) ggtcctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTg > 2:895982‑M1/97‑135 (MQ=255) ctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTag < 2:2425896‑M1/43‑1 (MQ=255) ctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTag < 2:1210835‑M1/43‑1 (MQ=255) ctcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCAGTTTTATTTTTTATACGGGAAGTATCTAAGcatggaag < 1:2108519‑M1/43‑4 (MQ=255) tcggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTaga > 2:1394113‑M1/92‑135 (MQ=255) ggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCttttttatttttt < 2:299227‑M1/17‑1 (MQ=255) ggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGc > 2:810036‑M1/90‑135 (MQ=255) ggcatttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGc > 1:1771457‑M1/90‑135 (MQ=255) catttcaaatatgcgcccatagctcaactggatagagtgtttgactacgtatcaaaaggttaggggttcgactcctcttgggcgcgtAGTGTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCAc < 2:2473102‑M1/48‑1 (MQ=255) catttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtCGTCTGTTTTATTTTTTAAACGGGAAGTATCTCATCTAGGTAGACCAc < 1:1943655‑M1/48‑1 (MQ=255) ttcaaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTg > 1:475412‑M1/85‑135 (MQ=255) aaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGtt < 2:1692618‑M1/54‑1 (MQ=255) aaatatgcgcccatagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGtt > 1:2008983‑M1/82‑135 (MQ=255) aaatatgcgcccatagcacaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGtt > 1:266756‑M1/82‑135 (MQ=255) atagctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTATGTTTTATGTTTTAAACGGGAAGTATCTCATGGTGGTAGAGGACTTGGTTTGTGACAAAggg < 1:974365‑M1/66‑1 (MQ=255) gctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTc > 2:2560308‑M1/67‑135 (MQ=255) gctcaactggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTc > 1:301307‑M1/67‑135 (MQ=255) ggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAg > 1:341444‑M1/59‑131 (MQ=255) ggatagagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTAATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTc < 2:1143488‑M1/77‑1 (MQ=255) agagtgtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGaa < 1:2448057‑M1/80‑1 (MQ=255) agagtgtttgactacggatcaaaaggttaggggttcgactcctcatgggcgagtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCATCTTGGTAGAGCACTTGGATTGGGACCAAGGGGTCTCAGGTTCGaa < 2:1616563‑M1/80‑1 (MQ=255) gtttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGaa < 1:484634‑M1/80‑1 (MQ=255) ttgactacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTg < 1:225086‑M1/39‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTa < 1:892886‑M1/29‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTcc < 2:1469551‑M1/91‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTcc < 2:724709‑M1/91‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTcc < 2:419725‑M1/91‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTcc < 2:744846‑M1/91‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTcc < 1:2514559‑M1/91‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTcc < 1:69032‑M1/91‑1 (MQ=255) actacggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTcc < 1:731178‑M1/91‑1 (MQ=255) ggatcaaaaggttaggggttcgactcctcttgggcgcgtATTCTGTTTTATTTTTTAATCGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCGTCCCGAtt < 1:2821840‑M1/96‑1 (MQ=255) ggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAg > 2:1339921‑M1/40‑112 (MQ=255) ggatcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAg < 1:1339921‑M1/73‑1 (MQ=255) atcaaaaggttaggggttcgactcctcttgggcgcgtAg < 2:534535‑M1/2‑1 (MQ=255) atcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGc < 2:1838211‑M1/46‑1 (MQ=255) atcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGc > 1:1838211‑M1/38‑83 (MQ=255) atcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGAtttt < 1:1044984‑M1/98‑1 (MQ=255) atcaaaaggttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGAtttt < 1:2793481‑M1/98‑1 (MQ=255) atcaaaaggttaggggttcgactcctcttgggcgcgtAGTATGTTTAATTTTTTAAACGGGAAGTAGATCAGCTTGGTAGAGCACTTGGTTTGGGACAAAGGGGTCGCAGGTTCGAATCCTGTCTACCCGAtttt < 2:465501‑M1/98‑1 (MQ=255) gttaggggttcgactcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCAGATTTTTTTTATCt < 2:1480406‑M1/106‑1 (MQ=255) ctcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGtttt < 1:296859‑M1/119‑1 (MQ=255) ctcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGtttt < 2:2065440‑M1/119‑1 (MQ=255) ctcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGtttt < 2:1287899‑M1/119‑1 (MQ=255) ctcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGtttt < 2:1006128‑M1/119‑1 (MQ=255) ctcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGtttt < 1:1363581‑M1/119‑1 (MQ=255) ctcctcttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGtttt < 1:1579796‑M1/119‑1 (MQ=255) ctcctcttgggcgcgtAGTCTGTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGACTCCTGGCTTCCCGATTTTTTTTATCTTGCGTTTtgttgt < 2:1188450‑M1/119‑3 (MQ=255) tcctcttcggcgagtAGTCGTCTTAATCTTTCAACCGGGACCTATCGCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTc > 1:2336210‑M1/16‑135 (MQ=255) ttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCa < 1:124527‑M1/34‑1 (MQ=255) ttgggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATg < 1:1672776‑M1/125‑1 (MQ=255) gggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAgggg < 1:1500‑M1/67‑1 (MQ=255) gggcgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAgggg > 2:1500‑M1/9‑75 (MQ=255) cgcgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTta < 1:71894‑M1/130‑1 (MQ=255) cgtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTtata < 1:41370‑M1/132‑1 (MQ=255) gtAGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATaa < 1:1506215‑M1/133‑1 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTTGAGCACTTGGTGTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 2:2218543/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 2:925749/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 2:859411/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 2:854645/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 2:2863006/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 2:1425272/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 1:844690/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 1:2899313/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 1:1148824/1‑135 (MQ=255) aGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAAtt > 1:1038381/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTCTTTTTTATTTTTTAAACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAATCCTGTCTTCCCGATTTTTTTTATCTTGCTTTTTGTTTTCAAATGATTTATAATT > AssemblyC74_contig_26/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |