| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_13 | = 46240 | 0 (0.000) | 141 (0.540) | 50/256 | 2.2 | 56.6% | intergenic (‑38/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Ser‑GGA/– |
| ? | AssemblyC74_contig_8 | = 1721 | 216 (0.780) | intergenic (+1/+137) | rasttk_feature_creation_tool=tRNAscan‑SE/rasttk_feature_annotation_tool=annotate_proteins_si milarity | tRNA‑Asn‑GTT/FIG00629206: hypothetical protein | |||||
Only 100 of 608 total aligned reads displayed.
AAATTCAAAAAAAGTATTGCGTTATTTAGAAGAAATTGATATTATATTCATGTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTATGTTGTAATCTTTACGAAAGAGTAGAGTTGGCTACTCAT > AssemblyC74_contig_8/1587‑1855 | aaTTCAAAAAAAGTATTGCGTTATTTAGAAGAAATTGATATTATATTCATGTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTa > 1:534521‑M2/1‑134 (MQ=255) aaTTCAAAAAAAGTATTGCGTTATTTAGAAGAAATTGATATTATATTCATGTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTa > 2:836407‑M2/1‑134 (MQ=255) gattgtagtgaggggttgccccttgtgagagtaggacgtcgccacgctgatgttATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCggagttctc < 2:1890600‑M2/81‑5 (MQ=255) aattgtagtgaggggttgccccttgtgagagtaggacgtcgccacgctgatgttATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGtaaa < 1:1056461‑M2/80‑1 (MQ=255) gaagaaATTGATATTATATTCATGTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAaagaaaaagaaa < 2:574945/135‑1 (MQ=255) gATATTATATTCATGTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTa < 1:156016‑M2/99‑2 (MQ=255) gATATTATATTCATGTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCAc > 1:209470/1‑135 (MQ=255) gTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGtttcttt > 1:1072909/1‑133 (MQ=255) tACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGtttctttttc > 1:599057/1‑135 (MQ=255) cTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGtttctttttctt > 1:1619355/1‑135 (MQ=255) gttattcCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctcttta > 1:1885419‑M2/4‑80 (MQ=255) gttattcCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctcttta > 1:2658640‑M2/4‑80 (MQ=255) gttattcCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctcttta > 2:1995818‑M2/4‑80 (MQ=255) gttattcCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctcttta > 1:1387036‑M2/4‑80 (MQ=255) gttattcCGGCATAGCTCAGTGGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctcttta > 2:2221585‑M2/4‑80 (MQ=255) ttattCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttac < 2:1134505‑M2/133‑57 (MQ=255) ttattCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttac > 1:2169704‑M2/3‑79 (MQ=255) ttattCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttac < 1:133987‑M2/133‑57 (MQ=255) ttattCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttac > 2:387442‑M2/3‑79 (MQ=255) gATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTtta < 2:361915/135‑1 (MQ=255) gATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTtta > 1:1529807/1‑135 (MQ=255) ccGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctg < 2:2110243‑M2/113‑40 (MQ=255) ccGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaaga < 2:1249826‑M2/135‑62 (MQ=255) ccGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaaga < 2:796535‑M2/135‑62 (MQ=255) cGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaag < 1:2897931‑M2/135‑63 (MQ=255) cGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaaga > 1:2423692‑M2/1‑73 (MQ=255) cGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTttattatt < 2:2368739/135‑1 (MQ=255) cGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTttattatt > 1:2542876/1‑135 (MQ=255) cGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTttattatt < 1:1000471/135‑1 (MQ=255) gCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaagga > 1:2707077‑M2/1‑71 (MQ=255) cATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTatg > 2:1690444/1‑135 (MQ=255) tAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtatt > 1:1826243‑M2/1‑68 (MQ=255) aGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcat < 1:1998832‑M2/135‑69 (MQ=255) aGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattg > 1:1226691‑M2/1‑62 (MQ=255) aGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactga < 2:1277502‑M2/134‑73 (MQ=255) aGTTGGGAGTAGCGCATGACTGTTCATCATGATGTCGTAGGGTCGAGTCCTACTGCCGGACTtctcattttgagaaagagtattgagcttctgtcactctggagagttgtccgagaggccgaaggagcatgattg > 2:909283‑M2/1‑62 (MQ=255) tGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGc > 1:889214/1‑135 (MQ=255) ggTAGTAGCGCATGACTGTTAATCATGGTGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattgga > 1:820165‑M2/1‑58 (MQ=255) gtagtaGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaat < 2:1440194‑M2/135‑79 (MQ=255) gtagtaGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCt > 2:466512/1‑134 (MQ=255) agCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgt < 2:1791607‑M2/135‑84 (MQ=255) agCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaactatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtct < 2:2899164‑M2/135‑84 (MQ=255) agCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGt > 1:1166570/1‑135 (MQ=255) gcgcATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtcta > 1:1284548‑M2/1‑51 (MQ=255) gcATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatt < 1:285407‑M2/135‑87 (MQ=255) cATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagat > 1:2365298‑M2/1‑48 (MQ=255) cATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGtttt < 1:247671/134‑1 (MQ=255) cATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGtttt < 2:2274673/134‑1 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatg < 1:1098420‑M2/135‑89 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatg < 1:1974279‑M2/135‑89 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatg < 1:1451824‑M2/135‑89 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatg > 2:2746015‑M2/1‑47 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttt < 2:319557‑M2/135‑89 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttt < 2:2797431‑M2/135‑89 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatact > 2:259517‑M2/1‑47 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGttttt > 1:785634/1‑134 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGttttt > 2:1218017/1‑134 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGttttt > 2:1343962/1‑134 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGttttt > 1:2746219/1‑134 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGttttt > 2:1532843/1‑134 (MQ=255) aTGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGttttt > 2:1548667/1‑134 (MQ=255) aCTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCa > 1:711357/1‑135 (MQ=255) aCTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCa < 1:38139/135‑1 (MQ=255) cTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgta < 2:2151666‑M2/135‑93 (MQ=255) cTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttac < 1:2123757‑M2/99‑57 (MQ=255) tGTTAATCATGATGTCGTAGGTTCTAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgca > 2:1953784‑M2/1‑42 (MQ=255) aTCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatg < 2:1849740‑M2/106‑70 (MQ=255) aTCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagttgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttggatactaa < 2:246520‑M2/135‑99 (MQ=255) aTCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTAtgt > 1:2773756/1‑135 (MQ=255) aTCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTAtgt > 2:2329089/1‑135 (MQ=255) aTCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTAtgt > 2:678001/1‑135 (MQ=255) tCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgcaaactgt > 1:2603071‑M2/1‑36 (MQ=255) cATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgcaaactgtc > 2:424589‑M2/1‑35 (MQ=255) atgatgTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttact > 1:999568‑M2/1‑34 (MQ=255) atgatgTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTAtgttgt < 2:1640081/135‑1 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatg < 2:70310‑M2/135‑107 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatg < 2:609889‑M2/135‑107 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatg < 1:743787‑M2/135‑107 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatg < 1:802566‑M2/135‑107 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatg < 2:176784‑M2/135‑107 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatat > 2:1487124‑M2/1‑29 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCa < 1:1854108/120‑1 (MQ=255) gTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTATGTTGTAATCt > 1:125515/1‑135 (MQ=255) tCGTAGGTTCGAGTCCTACTGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgcaaactgtctcaaggg > 1:348439‑M2/1‑28 (MQ=255) cGTAGGTTCGAGTCCTACTGCCGGAGTaaaagtagat > 2:1086145‑M2/1‑27 (MQ=255) tCGAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatgaagacat > 2:2683843‑M2/1‑20 (MQ=255) gAGTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatgaagacatatgc > 2:1742305‑M2/1‑18 (MQ=255) aGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTATGTTGTAATCTTTACGAAagagt > 2:2090764/1‑135 (MQ=255) gTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatgaagacatatgct < 2:2851251‑M2/134‑119 (MQ=255) gTCCTACTGCCGGAGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatgaagacatatgct < 1:2581231‑M2/134‑119 (MQ=255) tGCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgcaaactgtctcaagggttcgaatcccttactctcc < 1:448154‑M2/135‑127 (MQ=255) tGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTNTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCNCGTATGTTGTAATCTTTACGAAAGAGTAGAGtt > 2:1184494/1‑133 (MQ=255) gCCGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgcaaactgtctcaagggttcgaatcccttactctccg < 1:2282447‑M2/135‑128 (MQ=255) ccGGAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgca > 2:1390707‑M2/1‑7 (MQ=255) gAGTtctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgcaaactgtctcaagggttcgaatcccttactctccgtagc > 1:175464‑M2/1‑4 (MQ=255) gAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTATGTTGTAATCTTTACGAAAGAGTAGAGTTGGCTACt > 1:1917015/1‑135 (MQ=255) aGTaaaagtagatgtaagaaatatcatactgtagacaaaagtatcagtttcctctttactaagagtgtagactgatacttttgtctatttttgtataataaaaaatatgaagacatatgctcccactgctaagt < 2:2650061‑M2/134‑132 (MQ=255) gTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTATGTTGTAATCTTTACGAAAGAGTAGAGTTGGCTACTc < 1:1690444/134‑1 (MQ=255) gTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTATGTTGTAATCTTTACGAAAGAGTAGAGTTGGCTACTc < 1:68192/134‑1 (MQ=255) ttctcattttgagaaagagtattgagcttctttcactctggagagttgtccgagaggccgaaggagcatgattggaaatcatgtagatggtgcaaactgtctcaagggttcgaatcccttactctccgtagcaaa < 2:2535026‑M2/135‑135 (MQ=255) | AAATTCAAAAAAAGTATTGCGTTATTTAGAAGAAATTGATATTATATTCATGTACTTGATTCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAGTAAATAAAGCTTATGCAAAGAAAAAGAAATCCAATCACTTGGGTTTCTTTTTCTTTTATTATTATGATGAATCAAGCTTTCTGTTTTTGTCACGTATGTTGTAATCTTTACGAAAGAGTAGAGTTGGCTACTCAT > AssemblyC74_contig_8/1587‑1855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |