Predicted mutation
evidence seq id position mutation annotation gene description
RA AssemblyC74_contig_12 59,264 G→T A25E (GCA→GAA)  rasttk_feature_annotation_tool=annotate_proteins_km er_v2 ← Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AssemblyC74_contig_1259,2640GT99.6% 926.9 / NA 266A25E (GCA→GAA) rasttk_feature_annotation_tool=annotate_proteins_km er_v2Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base T (144/121);  minor base A (1/0);  total (145/121)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 274 total aligned reads displayed.

ACCACCGCTGTCTGACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCCAATTCATACCCCGTTGGCGCTTGGGTTTCTACCAGCTGATACACTCCTGGTGCTAAGCCGTCAATCGCCAGTTTTCCATCTGCTCCTGTGGTTAGACCTGACTGCAGAACGGTTCCATTGGCATCTTGTAACTCAAAAACAGCTCCTTGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑C  >  AssemblyC74_contig_12/59132‑59337
                                                                                                                                    |                                                                                                                                   
         gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                          <  2:1221001/135‑1 (MQ=17)
         gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                          >  1:2416946/1‑135 (MQ=17)
         gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                          <  1:1956524/135‑1 (MQ=17)
         gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                          <  1:742199/135‑1 (MQ=17)
         gTCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGtt                                                                                                                          <  1:1728804/135‑1 (MQ=17)
          tCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTa                                                                                                                         >  2:183991/1‑135 (MQ=17)
          tCTGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTa                                                                                                                         >  1:1066388/1‑135 (MQ=17)
            tGACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAa                                                                                                                        >  1:2059841‑M1/1‑133 (MQ=255)
            tGACTTCTTTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCTAGTTTTCCATCTTCTCCTGTAGTTAGa                                                                                                                       <  2:4050/135‑1 (MQ=17)
             gACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaac                                                                                                                      >  2:680881‑M1/1‑132 (MQ=255)
             gACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaac                                                                                                                      >  1:267772‑M1/1‑132 (MQ=255)
              aCTTCTTTCGATCTCAATCTCGATTGGTGTCGCATCTAATTCATACCTTATTGGCGCTTGAGTTTCTACCATCTGATATGCTCCTGGTGATAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAAAcc                                                                                                                     <  2:1086044/135‑1 (MQ=14)
              aCTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaacc                                                                                                                     >  2:2618234‑M1/1‑131 (MQ=255)
               cttcttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccg                                                                                                                    >  2:2473639/1‑134 (MQ=14)
                 tcttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggt                                                                                                                  <  1:2552713/135‑4 (MQ=14)
                  cttTCGATCTCAAACTCGATTGGTTACGCATCTAATTCATACCCTAATGGCGCTTGGGTTTCTACCAGCTGATATGATCCTGGTGATAAACCGTCAATTGCCAGTTTTCCATCTTATACTGTAGTTAAAccggtt                                                                                                                 >  2:141596/1‑131 (MQ=12)
                  cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                 <  2:1284108/135‑5 (MQ=14)
                  cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                 <  1:2857361/135‑5 (MQ=14)
                  cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAAAccggtt                                                                                                                 <  1:814796/135‑5 (MQ=14)
                  cttTCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTGTCTACCCGCTGATATGCTCCTGGTGATAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                 <  1:2633559/135‑5 (MQ=14)
                  cttTCGATCTCAAACTCGATCGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAGAccggtt                                                                                                                 <  2:2835504/135‑5 (MQ=14)
                     tCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGGGTTTCTACCAGCTGATATGTTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAg                                                                                                                        >  1:36485/1‑125 (MQ=17)
                     tCGATCTCAAACTCGATTGGTGTCGCATCTAATTCATACCCTATTGGCGCTTGGGTTTCTACCAGCTGATATGTTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAg                                                                                                                        <  2:776948/125‑1 (MQ=17)
                                           tCGCATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttc                                                                                         <  2:486857‑M1/134‑33 (MQ=255)
                                              cATCTAATTCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgt                                                                                      >  1:1024836‑M1/1‑99 (MQ=255)
                                                tctaattcATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaa                                                                                    >  2:1172012‑M1/4‑97 (MQ=255)
                                                      tCATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaa                                                                              >  1:1340565‑M1/1‑91 (MQ=255)
                                                       cATACCCTATTGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaa                                                                            <  1:1179183‑M1/135‑46 (MQ=255)
                                                           ccctattggcgcTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaa                                                                            <  2:1867372‑M1/126‑46 (MQ=255)
                                                           ccctattggcgcTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaa                                                                            >  1:1867372‑M1/6‑86 (MQ=255)
                                                            cctattggcgCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagc                                                                        >  1:71674‑M1/5‑85 (MQ=255)
                                                               attgGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctcct                                                                    <  1:124482‑M1/134‑54 (MQ=255)
                                                                 tGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttg                                                                  >  1:1467156‑M1/1‑80 (MQ=255)
                                                                 tGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttg                                                                  >  2:848503‑M1/1‑80 (MQ=255)
                                                                 tGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttg                                                                  <  2:2038191‑M1/135‑56 (MQ=255)
                                                                 tGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttg                                                                  <  2:390949‑M1/135‑56 (MQ=255)
                                                                 tGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttg                                                                  >  1:53889‑M1/1‑80 (MQ=255)
                                                                 tGGCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttatccttctcggttctgtaactcaaaaacagctccttg                                                                  <  2:1667821‑M1/135‑56 (MQ=255)
                                                                  ggCGCTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttga                                                                 >  1:2225330‑M1/1‑79 (MQ=255)
                                                                   gcgcTTGGGTTTCTACCAGCTGATATGTTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaa                                                                >  1:2189930‑M1/1‑78 (MQ=255)
                                                                   gcgcTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaa                                                                >  2:257765‑M1/1‑78 (MQ=255)
                                                                   gcgcTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaa                                                                >  1:2508226‑M1/1‑78 (MQ=255)
                                                                   gcgcTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttatccttctcggttctgtaactcaaaaacagctccttgaa                                                                >  1:2718948‑M1/1‑78 (MQ=255)
                                                                      cTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaagga                                                             <  2:2402076‑M1/135‑61 (MQ=255)
                                                                      cTTGAGTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaagga                                                             <  1:2344528‑M1/135‑61 (MQ=255)
                                                                         gggTTTCTACCAGCTGATACACTCCTGGTGCTAAGCCGTCAATAGCCAGTTTTCCATCTTCTCCTGTAGTTAGACCTGTGTGAAGATGTTCTCCTTAGCCTTTATGTAACTCAAAAACAGCTCCTTGCAGGaaat                                                          >  2:2069885/1‑132 (MQ=9)
                                                                         gagttTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggactt                                                          >  1:1368443‑M1/3‑72 (MQ=255)
                                                                         gagttTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggactt                                                          >  1:1123654‑M1/3‑72 (MQ=255)
                                                                         gagttTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggactt                                                          >  1:2012813‑M1/3‑72 (MQ=255)
                                                                           gTTTCTACCAGCTGATATGTTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAtaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttc                                                         >  2:910036‑M1/1‑70 (MQ=255)
                                                                           gTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaactgctccttgaaggacttc                                                         >  2:1751495‑M1/1‑70 (MQ=255)
                                                                           gTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttc                                                         >  2:338233‑M1/1‑70 (MQ=255)
                                                                           gTTTCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTATTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttc                                                         >  2:2858251‑M1/1‑70 (MQ=255)
                                                                            tttCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttca                                                        <  2:2268162‑M1/134‑66 (MQ=255)
                                                                            tttCTACCAGCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttca                                                        <  2:1017754‑M1/134‑66 (MQ=255)
                                                                                     gCTGATATGCTCCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgcctt                                              <  1:2900466‑M1/135‑76 (MQ=255)
                                                                                        gatatgctcctggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgcctt                                              <  1:428907‑M1/126‑76 (MQ=255)
                                                                                        gatatgctcctggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgcctt                                              <  1:2686662‑M1/126‑76 (MQ=255)
                                                                                         atatgctcctgGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctcct                                                                    <  1:760724‑M1/104‑54 (MQ=255)
                                                                                           atgctccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagca                                         <  1:1525419‑M1/131‑81 (MQ=255)
                                                                                            tgctcCTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctcctgctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatg                                       >  2:2732011‑M1/3‑53 (MQ=255)
                                                                                                ccaggtgcTACACCGACAATTGCCAGTATTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                    <  2:739565‑M1/131‑86 (MQ=255)
                                                                                                ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                    <  2:1340565‑M1/134‑86 (MQ=255)
                                                                                                ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                    <  2:2787433‑M1/134‑86 (MQ=255)
                                                                                                ccTGGTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgttt                                    <  2:727837‑M1/134‑86 (MQ=255)
                                                                                                  tGGTGCTAAACCGTCAATTGCCAGTTTTCCAACATCTCCTGTAGTTAcaccggtttggagcgttactccttctcgtttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaat                                 <  2:2019871‑M1/135‑89 (MQ=255)
                                                                                                   ggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAcaccggtttgtagcgtttctccttctcggttc                                                                                         <  1:1006259‑M1/78‑33 (MQ=255)
                                                                                                   ggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctctgttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatt                                <  2:160504‑M1/135‑90 (MQ=255)
                                                                                                   ggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatt                                >  1:1893‑M1/1‑46 (MQ=255)
                                                                                                   ggTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatt                                >  1:2830927‑M1/1‑46 (MQ=255)
                                                                                                    gTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatta                               >  2:171755‑M1/1‑45 (MQ=255)
                                                                                                    gTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatta                               <  1:1608550‑M1/135‑91 (MQ=255)
                                                                                                    gTGCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatta                               <  2:2147516‑M1/135‑91 (MQ=255)
                                                                                                      gCTAAACCGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattag                              >  1:1754228‑M1/1‑43 (MQ=255)
                                                                                                             cGTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAcaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacac                      <  2:1985812‑M1/135‑100 (MQ=255)
                                                                                                              gTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacacc                     <  2:110923‑M1/135‑101 (MQ=255)
                                                                                                              gTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacacc                     <  2:1195177‑M1/135‑101 (MQ=255)
                                                                                                              gTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacacc                     <  1:1885887‑M1/135‑101 (MQ=255)
                                                                                                              gTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacacc                     <  1:757054‑M1/135‑101 (MQ=255)
                                                                                                              gTCAATTGCCAGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtgtaattagttcaacac                      >  2:2357728‑M1/1‑35 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTATTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggccttctccactgccttccgcatgtttaattagttcaacaccaccc                 >  2:356771‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                 >  2:1688903‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                 >  1:1091686‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                 >  2:511074‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                 >  2:1469491‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                 >  1:926826‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                 >  1:529541‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccaccc                 >  1:655644‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacacaaccc                 >  2:2443538‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaatta                               >  1:1808519‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgcctt                                              >  1:959695‑M1/4‑31 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttg                                                                  <  1:2129921‑M1/83‑56 (MQ=255)
                                                                                                                  attgccaGTTTTCCATCTTCTCCTGTAGTAAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccacagccttcaccatgtataattagttcaacaccaccc                 >  2:823279‑M1/4‑31 (MQ=255)
                                                                                                                        aGTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatca           <  2:1091686‑M1/135‑111 (MQ=255)
                                                                                                                        aGTTGTCCATCTTCTCCTGTAGTTAaaccggttggtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatca           <  2:317024‑M1/135‑111 (MQ=255)
                                                                                                                         gTTTTCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaa          >  2:640021‑M1/1‑24 (MQ=255)
                                                                                                                             tCCATCTTCTCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggat      >  1:1596524‑M1/1‑20 (MQ=255)
                                                                                                                                 tcttctCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttt  <  2:529541‑M1/135‑120 (MQ=255)
                                                                                                                                 tcttctCCTGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactcaaaaacagctccttgaaggacttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttt  <  1:910036‑M1/135‑120 (MQ=255)
                                                                                                                                 tcttctCATGTAGTTAaaccggtttgtagcgtttctccttctcggttctgtaactaaaaaacagctccttgaaggtcttcaccactgccttcagcatgtttaattagttcaacaccacccgtatcaaggatgttt  <  2:48337‑M1/135‑120 (MQ=255)
                                                                                                                                    |                                                                                                                                   
ACCACCGCTGTCTGACTTCTTTCGATCTCAAACTCGATTGGTGTCGCATCCAATTCATACCCCGTTGGCGCTTGGGTTTCTACCAGCTGATACACTCCTGGTGCTAAGCCGTCAATCGCCAGTTTTCCATCTGCTCCTGTGGTTAGACCTGACTGCAGAACGGTTCCATTGGCATCTTGTAACTCAAAAACAGCTCCTTGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑C  >  AssemblyC74_contig_12/59132‑59337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: