| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_12 | 59059 = | 186 (0.450) | 693 (1.750) +ATCCTG |
83/236 | 0.6 | 81.9% | coding (279/672 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Putative peptidoglycan bound protein (LPXTG motif) Lmo2178 homolog |
| ? | AssemblyC74_contig_18 | 27021 = | 136 (0.320) | coding (2179/2232 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 764 total aligned reads displayed.
ATGAATTGGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAATCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_12/59189‑59059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGT‑‑‑T > AssemblyC74_contig_18/27021‑27075 |||||| TGAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCT < 2:3433336/135‑1 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAGTTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTG > 1:3868346/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTG > 1:1762651/1‑135 GAATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTAACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTG > 1:1351933/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 2:1442560/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 2:3291174/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 2:3712419/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 2:3160418/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 2:3568270/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 2:553974/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 1:1838123/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 1:1887210/1‑135 ATTAGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTAACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA > 2:3849569/1‑135 taGATGCGACTCCAATCGAGTTTGAGATCGAAATATGTCAGACAGCGGTGGTAGAATTGACGAATGACAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAG < 1:2473880/133‑1 taGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAACGC‑GGGGAAATCCTGCAAG < 2:2687624/133‑1 taGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAG < 1:3754378/133‑1 taGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAG < 1:3222493/133‑1 GATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTAACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAg > 1:818549/1‑131 TGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGG > 1:1690672/1‑132 GCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGG > 2:2926589/1‑131 GCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAA > 2:3528566/1‑121 CGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAACGC‑GGGGAAATCCTGCAAGGAGCTG < 2:173924/135‑1 CGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTG < 1:2112146/135‑1 CGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTG > 1:2024105/1‑135 CGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTG > 2:635258/1‑135 ACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTT > 2:934244/1‑135 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGTTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTT > 1:161583/1‑135 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTT < 1:788844/134‑1 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTT < 1:2939982/134‑1 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTT < 1:3652830/134‑1 ACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGATGTTT < 2:46621/134‑1 CCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGCGGGGGAAATCCTGCAAGGAGCTGTTT > 1:145043/1‑134 CCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCA < 1:2294230/122‑1 CCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCT < 1:615931/119‑1 ATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAG < 1:949373/135‑1 GAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTA < 1:2976120/135‑1 GAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTA > 1:3807837/1‑135 GAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAG < 2:1853082/118‑1 AGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTT > 1:2675992/1‑133 TGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGA < 2:2116510/134‑1 AGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACC < 1:2897936/135‑1 ATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGAATAAAGAAAACCTACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGAGGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCG < 2:2057954/134‑1 AGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACA > 1:128770/1‑122 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:1207782/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:1976074/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:2749597/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:2222622/135‑1 GAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG < 2:2812386/135‑1 GCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACA > 1:2752739/1‑134 GCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG > 2:2869872/1‑124 GCGGTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTA > 1:1214226/1‑108 GCGGTGGTAGAATTGAAGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATACTGAAAGGAGCTGATTTTGAGTTACAGAACAGAGAAGGAGAAAAGATACA > 2:1064902/1‑134 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGACCCGAGAAGGAGAAACGCTACAAACC < 1:3160418/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:2166697/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:753529/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:2024105/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:3898553/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:814801/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:1053459/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:1000443/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:1543239/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:1329782/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:520894/135‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAA < 2:2294752/132‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTAC < 2:1891418/130‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTAC < 1:3074558/130‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTAC < 1:3383404/130‑1 GTGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTAC < 2:262676/130‑1 TGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCG > 1:2065236/1‑135 TGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCAGTTTTTGAGTTACAGAACCGAGAAGGAGAAACTCTACAAACCG > 1:996936/1‑135 TGGTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCT > 2:3345403/1‑82 GGTAGAATTAACGAAAGAAAACCGACGTACCCCCGGCGGTGTCGTGTTGACAAAGATCGATGACCAACGC‑GGGGAAATCCTGCAAG < 2:3039536/86‑1 GTAGAATTGACGAAAGAAAACCGACTTACACCTGGCTGTGTCTTGTTGACAAAGATCGATGACCAAAGC‑GGGGATATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGTAGGAGAAAAGCTACAAACCGG < 2:1579396/134‑1 GTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCG > 2:1258531/1‑133 GTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTAC < 2:1918173/127‑1 GTAGAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG > 1:258778/1‑118 GAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTct > 2:163846/1‑132 GAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTct > 2:3651254/1‑132 GAATTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTct > 1:3573052/1‑132 TTGACGAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTctaa < 1:3498146/133‑5 GAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAg < 1:1136407/73‑2 GAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAg > 2:1136407/1‑72 GAAAGAAAACCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTAC > 2:2961258/1‑116 GGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAg < 1:2227049/48‑2 GGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAg < 1:408074/48‑2 GGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGGGAAGGAGAAACGCTACAAACCGGTctaa > 2:2508475/1‑99 GGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTctaa < 1:331828/103‑5 GGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCT > 2:1784094/1‑44 GTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:885695/95‑1 CGTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAG < 1:2834937/58‑1 GTGTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG < 1:713870/92‑1 GTTGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGTct > 2:3793617/1‑91 TGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 1:2175276/86‑1 TGACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAG < 1:1922107/39‑1 ACAAAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG < 2:2426157/86‑1 AAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAG > 2:1522617/1‑67 AAGATCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTA < 1:1968852/51‑1 TCGATGACCAAAGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC > 1:450032/1‑77 AGC‑GGGGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGG > 1:2517968/1‑68 gggGAAATCCTGCAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACC < 2:875240/60‑1 |||||| ATGAATTGGATGCGACACCAATCGAGTTTGAGATCGAAAGAAGTCAGACAGCGGTGGTAGAATTGACGAAAGAAAATCGACTTACACCAGGCGGTGTCGTGTTGACAAAGATCGATGACCAAAGC‑GGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_12/59189‑59059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGGAGCTGTTTTTGAGTTACAGAACCGAGAAGGAGAAACGCTACAAACCGGT‑‑‑T > AssemblyC74_contig_18/27021‑27075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |