New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_21 = 108430 (0.000)295 (0.590) 83/248 0.3 100% intergenic (+54/–) rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– Mobile element protein/–
?AssemblyC74_contig_49 = 764 0 (0.000)intergenic (+2/–) rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– Mobile element protein/–

Only 100 of 295 total aligned reads displayed.

GAAAACCCGAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_21/10711‑10843
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTGGATTCGTGATTGAGTA  <  AssemblyC74_contig_49/764‑631
                                                                                                                                                                                                                                                                           
   AACCCGAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTT                                                                                                                                   >  1:668977/1‑135
      CCGAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAG                                                                                                                                >  2:1180823/1‑135
        GAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGG                                                                                                                              >  1:3489873/1‑135
        GAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGG                                                                                                                              >  1:3684896/1‑135
        GAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATGTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGG                                                                                                                              >  2:1469225/1‑135
            AGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCA                                                                                                                            >  1:3564967/1‑133
                GGCACTCTCTTCGGGTTTTCGGTCTGTACTCAAAACAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTT                                                                                                                       <  1:706919/134‑1
                 GCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTT                                                                                                                     >  1:1982688/1‑135
                   ACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCA                                                                                                                   >  1:1759920/1‑135
                        CTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGAT                                                                                                              <  2:3218405/135‑1
                          TCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTT                                                                                                            >  2:3730146/1‑135
                          TCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTT                                                                                                            >  2:3140735/1‑135
                           CGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGAT                                                                                                              >  1:1352575/1‑132
                            GGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  1:2686918/135‑1
                            GGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  1:2801541/135‑1
                            GGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  2:1117274/135‑1
                            GGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  2:1641383/135‑1
                            GGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  2:2114604/135‑1
                            GGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  2:3783688/135‑1
                            GGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  2:386851/135‑1
                              GTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTAT                                                                                                         >  2:1678499/1‑134
                               TTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTAT                                                                                                         >  2:470767/1‑133
                                 TTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTC                                                                                                                    <  1:1043343/120‑1
                                   CGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAA                                                                                                   <  2:3579317/135‑1
                                    GGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAAT                                                                                                  >  1:1821135/1‑135
                                    GGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAAT                                                                                                  >  2:183942/1‑135
                                    GGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAAT                                                                                                  >  1:3065602/1‑135
                                    GGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  2:590700/127‑1
                                     GTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATA                                                                                                 <  2:1284822/135‑1
                                      TCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATAT                                                                                                >  2:2282773/1‑135
                                        TGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATAT                                                                                              <  2:26729/135‑1
                                           ACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCC                                                                                                                                     >  2:284999/1‑93
                                           ACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCC                                                                                                                                     <  1:284999/93‑1
                                            CTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  2:2016594/134‑1
                                            CTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  1:147440/134‑1
                                            CTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  2:1767570/134‑1
                                            CTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  2:3684896/134‑1
                                            CTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  2:2463971/134‑1
                                            CTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  1:833562/134‑1
                                            CTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  1:470767/134‑1
                                             TGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTT                                                                                         >  2:394236/1‑135
                                                 ATCAAGGTCTTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCC                                                                                     <  1:2317010/135‑1
                                                  TCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTC                                                                                      >  2:1240287/1‑133
                                                  TCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTC                                                                                      >  2:1979761/1‑133
                                                  TCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGAT                                                                                                              <  1:1396558/109‑1
                                                  TCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGAT                                                                                                              <  1:120579/109‑1
                                                    AAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCT                                                                                  <  1:1678499/135‑1
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGG                                                                               >  1:1069572/1‑135
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGG                                                                               >  1:1295473/1‑135
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGG                                                                               >  1:795226/1‑135
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGG                                                                               >  2:2748332/1‑135
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGG                                                                               >  1:2165080/1‑135
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  2:332502/108‑1
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          >  2:2260484/1‑108
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          >  1:332567/1‑108
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTC                                                                                                                    <  2:806187/98‑1
                                                       GTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAG                                                                                                                                >  2:3042880/1‑86
                                                         ATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATAACCTTTGTCCCCTAGGAT                                                                             >  1:544179/1‑135
                                                            ATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATT                                                                          >  2:3094776/1‑135
                                                            ATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATT                                                                          <  2:1403624/135‑1
                                                              TGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGG                                                                        >  2:3798198/1‑135
                                                              TGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCC                                                                                    >  1:2535213/1‑123
                                                              TGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCC                                                                                    <  2:2535358/123‑1
                                                              TGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTA                                                                                                          <  1:2281061/101‑1
                                                                   ATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCT                                                                                           <  1:963240/111‑1
                                                                   ATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATC                                                                                             >  2:3884591/1‑109
                                                                     CCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATT                                                                 >  1:3846478/1‑135
                                                                             AAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCT                                                          >  1:2045389/1‑134
                                                                                TCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCG                                                      >  2:745474/1‑135
                                                                                TCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCG                                                      <  1:761709/135‑1
                                                                                  ATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGAT                                                    <  2:3276817/135‑1
                                                                                  ATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGAT                                                    <  2:1759920/135‑1
                                                                                       TACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAA                                                 >  2:2140944/1‑133
                                                                                       TACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTATACATGGATTTTATGGCTAATATATCCTTAGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGAAAAA                                                 >  1:302764/1‑133
                                                                                          CGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTC                                            <  1:3759530/135‑1
                                                                                             AAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAA                                         >  1:1146799/1‑135
                                                                                             AAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTT                                                                                         >  1:1556676/1‑87
                                                                                             AAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTT                                                                                          <  2:3434129/86‑1
                                                                                               GGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAA                                         >  2:44261/1‑133
                                                                                                 GATTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGG                                                                                                                               >  2:2083577/1‑45
                                                                                                   TTTTATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTT                                    <  1:1826673/134‑1
                                                                                                    TTTATTCTTTATTTAAAACTTTGCAACAGCACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTC                                  <  1:2198966/135‑1
                                                                                                       ATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCAC                                >  2:3559839/1‑134
                                                                                                       ATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCAC                                >  1:2413392/1‑134
                                                                                                       ATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCG                                                      >  2:1879480/1‑112
                                                                                                       ATTCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCG                                                      <  1:1879480/112‑1
                                                                                                         TCTTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTC                             <  1:1702360/135‑1
                                                                                                           TTTATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCAT                           <  2:1592927/135‑1
                                                                                                              ATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGA                        >  2:135733/1‑135
                                                                                                              ATTTAAAACTTTGCAACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGA                        <  2:931411/135‑1
                                                                                                                            AACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTGGATTCGTG          >  1:1602407/1‑135
                                                                                                                            AACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTGGATTCGTG          >  1:3315677/1‑135
                                                                                                                            AACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACT                                     <  1:3935506/108‑1
                                                                                                                            AACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACAC                                      >  1:2090319/1‑107
                                                                                                                            AACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTAGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTG                  <  2:3260218/127‑1
                                                                                                                            AACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTAGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTG                  >  1:3260218/1‑127
                                                                                                                            AACAGAACCCCCTTAAGGGCAAGCTGTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTGGATTCGTG          >  1:1007919/1‑135
                                                                                                                             ACAGAACCCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTGGATTCGTG          <  1:3907576/134‑1
                                                                                                                                    CCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATA                                                                                                 <  2:2985690/40‑1
                                                                                                                                    CCCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATA                                                                                                 >  1:2985690/1‑40
                                                                                                                                                                                                                                                                           
GAAAACCCGAAAAGAAGGCACTCTCTTCGGGTTTTCGGTCTGTACTGAAATCAAGGTATTATTGGGAATCCCAGCTTAAATCATAGATACCGTAAGGGATTTTATTCTTTATTTAAAACTTTGCAACAGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_21/10711‑10843
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCTTAAGGGCAAGCTTTTCATGGATTTTATGGCTAATATATCCTTTGTCCCCTAGGATATTGGGAAGATTCGCTTCTTCCGATAAAGTCTCTAACACTTTCACGTCATGGACACCTGGATTCGTGATTGAGTA  <  AssemblyC74_contig_49/764‑631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.