New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_3 = 2551270 (0.000)281 (0.270) 74/248 0.5 100% intergenic (‑345/–) rasttk_feature_annotation_tool=elepa@bvbrc/– hypothetical protein/–
?AssemblyC74_contig_45 = 1002 0 (0.000)intergenic (‑96/–) rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– Integrase, catalytic region/–

Only 100 of 281 total aligned reads displayed.

CATCTGCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_3/254995‑255127
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACCCATCTTACACCAAACGAGCTT  <  AssemblyC74_contig_45/1002‑874
                                                                                                                                                                                                                                                                      
 ATCTGCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTAAGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGC                                                                                                                                <  1:3380528/135‑1
 ATCTGCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCAATAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGC                                                                                                                                <  1:2444715/135‑1
     GCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTT                                                                                                                            <  1:1042755/135‑1
     GCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTT                                                                                                                            >  1:798736/1‑135
     GCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTT                                                                                                                            <  2:1805260/135‑1
     GCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTT                                                                                                                            >  2:296219/1‑135
     GCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTT                                                                                                                            <  2:3623025/135‑1
       GTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGC                                                                                                                                >  2:3495533/1‑129
                AATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTA                                                                                                                  >  2:3543656/1‑134
                                   ACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGC                                                                                              <  2:2483715/135‑1
                                   ACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCATTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGC                                                                                              <  1:2105757/135‑1
                                   ACATTTTATAAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTATTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGAGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGC                                                                                              <  2:2123885/135‑1
                                     ATTTTATCTATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCA                                                                                            <  1:286043/135‑1
                                     ATTTTATCAATCGATTTCAGAATTAAATTTTTACGTAGTATGGTTGTTTTTATCTCTTATTATTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACTAATAAAAAAGCCA                                                                                            <  2:2043182/135‑1
                                         TATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTA                                                                                        >  2:1412509/1‑135
                                         TATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTA                                                                                        <  2:1084133/135‑1
                                          ATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTAT                                                                                       >  1:727165/1‑135
                                            CAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGT                                                                                     >  1:2294603/1‑135
                                            CAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGT                                                                                     >  1:1220651/1‑135
                                             AATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAATAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGT                                                                                     >  1:50944/1‑134
                                             AATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTT                                                                                    >  1:3421314/1‑135
                                             AATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGT                                                                                     >  1:597531/1‑134
                                             AATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCGTATTCTTTTTATAGGTGTTTTGCGATATATTTATAATTACGCCGTTTGTATAATTAATCGAGACAAATAAAAAATCCATTTATtt                                                                                     >  1:1071905/1‑132
                                              ATCGCTTTCAGCATTAAATTTTTACGTAGTAGTGTTGTTTTTATCTCTTATTCTTATTATCGTTGTTTTGCGATATCTGTATAAGAACGACGTTTGTATAATTAAGAGAGACAAAAAAAAAAGCCATTAATTTTA                                                                                   >  1:2900142/1‑135
                                                 GCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACAC                                                                                <  2:281887/135‑1
                                                  CTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACT                                                                               >  2:1895591/1‑135
                                                  CTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACT                                                                               >  2:161738/1‑135
                                                  CTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACT                                                                               >  2:3918369/1‑135
                                                  CTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACT                                                                               >  1:2013723/1‑135
                                                  CTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACT                                                                               >  2:3479094/1‑135
                                                  CTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACAC                                                                                <  1:908461/134‑1
                                                  CTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGC                                                                                                                                >  2:758471/1‑86
                                                    TTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTC                                                                              <  2:798736/134‑1
                                                     TCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGC                                                                                                                                <  1:315767/83‑1
                                                     TCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGC                                                                                                                                >  2:315767/1‑83
                                                           TTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTA                                                                      <  1:515119/135‑1
                                                               ATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATA                                                                   >  1:3104367/1‑134
                                                               ATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATA                                                                   >  2:1199870/1‑134
                                                                   TTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              <  2:1071905/135‑1
                                                                   TTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              <  2:3104367/135‑1
                                                                   TTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              <  2:3235952/135‑1
                                                                   TTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              <  1:3451803/135‑1
                                                                   TTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              <  2:588080/135‑1
                                                                   TTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGAGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              <  1:1197645/135‑1
                                                                     ACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTA                                                            <  1:992369/135‑1
                                                                      CGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAATCCATTTATGTTACACTCAAATTGTAATACCCGCTAA                                                           >  1:3782307/1‑135
                                                                       tTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGAGATATATTTATAAGAACGCCGTTTTTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAA                                                          <  2:721930/134‑1
                                                                       GTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAA                                                          <  1:231783/135‑1
                                                                       GTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAA                                                          <  2:389658/135‑1
                                                                             GGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATAC                                                    <  1:1141064/135‑1
                                                                             GGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATAC                                                    >  1:3489140/1‑135
                                                                              GGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACA                                                   >  2:236447/1‑135
                                                                                TTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACA                                                   <  1:3543656/133‑1
                                                                                TTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACA                                                   <  1:2171048/133‑1
                                                                                TTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACA                                                   <  1:2223363/133‑1
                                                                                   TTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAG                                              <  1:1533702/135‑1
                                                                                      TTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAATAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGT                                           >  2:364815/1‑135
                                                                                      TTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGT                                           >  1:1012922/1‑135
                                                                                      TTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGT                                           >  2:2187138/1‑135
                                                                                      TTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGT                                           >  2:3444676/1‑135
                                                                                      TTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATAC                                                    >  1:760718/1‑126
                                                                                      TTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACAC                                                                                <  1:1641277/98‑1
                                                                                      TTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCA                                                                                            >  1:3902008/1‑86
                                                                                        ATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTG                                          >  1:1321612/1‑134
                                                                                        ATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTG                                          >  2:2632118/1‑134
                                                                                        ATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTG                                          >  2:3561975/1‑134
                                                                                        ATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTG                                          >  2:3824087/1‑134
                                                                                           TCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACA                                      <  2:485341/135‑1
                                                                                           TCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACA                                      <  1:3918369/135‑1
                                                                                           TCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACA                                      <  1:296219/135‑1
                                                                                           TCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              >  2:1280991/1‑111
                                                                                            CTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAATCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACAT                                     <  1:690594/135‑1
                                                                                            CTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACAT                                     <  1:2940858/135‑1
                                                                                            CTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACAT                                     <  2:3336308/135‑1
                                                                                            CTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACAT                                     <  1:2829481/135‑1
                                                                                                TTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAATGAGAGTGAACATAAAT                                 >  2:2685400/1‑135
                                                                                                TTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAAT                                 <  1:3841687/135‑1
                                                                                                TTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAAT                                 <  1:3692475/135‑1
                                                                                                TTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTA                                                            <  2:925851/108‑1
                                                                                                TTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTA                                                            <  2:1748887/108‑1
                                                                                                TTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTA                                                            >  1:1748887/1‑108
                                                                                                      TTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTA                           <  2:3321351/135‑1
                                                                                                      TTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTA                           <  1:3264823/135‑1
                                                                                                      TTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTA                           <  2:1012945/135‑1
                                                                                                      TTATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTA                           <  2:1157559/135‑1
                                                                                                       TATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTAT                          <  2:2590121/135‑1
                                                                                                        ATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAATCATACTAGGAGAGTGAACATAAATGACTTtt                          >  1:3670876/1‑132
                                                                                                        ATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCA                                                       <  1:1248769/105‑1
                                                                                                        ATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCA                                                       >  2:1248769/1‑105
                                                                                                        ATCGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGC                                                                                              <  2:2304603/66‑1
                                                                                                          CGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACC                       >  2:2495513/1‑135
                                                                                                          CGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACC                       >  1:1301051/1‑135
                                                                                                          CGTTGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTA                                                            >  1:2758823/1‑98
                                                                                                             TGTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACCC                      >  2:2884621/1‑133
                                                                                                              GTTTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACCCATC                   <  2:578333/135‑1
                                                                                                                TTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGA                                             <  2:2710721/107‑1
                                                                                                                TTTGCGATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGA                                             >  1:2710721/1‑107
                                                                                                                      ATATCTTTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACCCATCTTACACC            <  2:2245722/134‑1
                                                                                                                            TTATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGC                                                              >  1:2359037/1‑78
                                                                                                                              ATAAGAACGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACCCATCTTACACCAAACGAGCT   <  1:2489166/135‑1
                                                                                                                                                                                                                                                                      
CATCTGCGTTTTTTATAATAAAAATAATAAAACATACATTTTATCAATCGCTTTCAGCATTAAATTTTTACGTAGTAGGGTTGTTTTTATCTCTTATTCTTTTTATCGTTGTTTTGCGATATCTTTATAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_3/254995‑255127
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCGTTTGTATAATTAAGCGAGACAAATAAAAAAGCCATTTATGTTACACTCAAATTGTAATACCCGCTAAAGCATACAAGGAGAGTGAACATAAATGACTTATACCCATCTTACACCAAACGAGCTT  <  AssemblyC74_contig_45/1002‑874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.