| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | = 3396 | 0 (0.000) | 302 (0.310) +AAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTT |
62/168 | 0.4 | 100% | noncoding (118/118 nt) | rasttk_feature_creation_tool=RNA_reps_5S_rRNA | 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation |
| ? | AssemblyC74_contig_5 | = 185954 | 0 (0.000) | intergenic (‑299/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Cof protein:HAD‑superfamily hydrolase, subfamily IIB/– | |||||
Only 100 of 363 total aligned reads displayed.
TACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3304‑3396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTGATTTGGATTCAATTCATATTTA < AssemblyC74_contig_5/185954‑185821 |||||||||||||||||||||||||||||||||||||||| TACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTG < 2:2738190/134‑1 AACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAATGCAAAAATATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTT < 2:1885544/135‑1 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAATATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 2:3154957/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATGTTT > 2:2150035/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 2:126496/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 2:2649383/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 1:3056469/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 1:2703041/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 1:2620518/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 2:3828827/1‑134 CCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTT > 1:145666/1‑134 GCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTA < 1:1586010/135‑1 GCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTA < 2:2971413/135‑1 GCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTA < 2:3921821/135‑1 GCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTA < 2:2517526/135‑1 GCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTA < 2:1957261/135‑1 CCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAA > 2:1362384/1‑135 gacCACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGGGAGGGGTTGCCCCTTGTGAGAGTCGGTCGTCGCCACGCAAAGGCAAAAAGATTAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTTAG < 2:2670166/131‑1 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTCGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAATTCTTTTGCTAAGT > 2:1012021/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGT > 1:2904978/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGT > 1:538860/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGT > 1:1158934/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGT > 1:1236587/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGT > 2:3335193/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGT > 1:177968/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGT > 1:2221325/1‑135 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAG < 1:1858986/134‑1 GAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTT < 1:2647579/128‑1 AACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTT < 1:1362384/135‑1 AACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTT < 1:514794/135‑1 AACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTT < 1:3734972/135‑1 CACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTG < 1:3232726/134‑1 CACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTG < 1:1205949/134‑1 GTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAAT < 2:3056469/134‑1 GTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAA < 1:2818051/133‑1 GTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAA < 1:257888/133‑1 GTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAA < 2:116781/133‑1 AGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTT > 2:2335285/1‑122 TTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTA < 2:2881690/135‑1 AGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATG > 2:2233141/1‑135 ATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCG > 1:241580/1‑135 TGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGA < 2:2620518/134‑1 GTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATTAATATCGAAG > 2:1112517/1‑135 GTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTT < 2:2193309/121‑1 GTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGATCATCTTTTTTAGTTTAAATCATTTGCTAAGTTTAACTAATATAGTATTTTATGAATATCGAAa > 1:2979499/1‑134 GTGAGGGGTTGCCCCTTGTTAGAGTAGGACGTCTCCACTCAAATGCAAAAAGATTAAATAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTt < 2:2027329/102‑2 TTGCCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTC > 1:2365785/1‑134 TTGACCCTTGTTAGAGTAGGACGTCGCCACGAAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCATTTGATAAGTTTAACTAATAGATTCTTTTAAGAATATAGAAGTTAGTTTTTC > 2:671839/1‑134 CCCCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGTACTAGAAATCGTGCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAAGTAATAGAGTCTTTTATGAATAGCGAAGTTCGTTTTTCACCT > 2:3813725/1‑135 CCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCT > 1:3415442/1‑133 CCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCT > 1:1997697/1‑133 CCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAA < 1:76116/95‑1 CCTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAA > 2:76116/1‑95 CTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAAC < 2:3743291/135‑1 CTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAAT < 1:825689/95‑1 CTTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAAT > 2:825689/1‑95 TTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTCGACCTAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACT < 2:3543261/135‑1 TTGTGAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACT < 1:127535/135‑1 GAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGT > 1:97551/1‑135 GAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGT > 1:2484190/1‑135 GAGAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGT > 2:414493/1‑135 GAGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTGCGTTT > 2:1763397/1‑135 AGTAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTT < 2:931214/134‑1 TAGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTT < 1:3364584/133‑1 AGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTA > 1:879703/1‑135 AGGACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACT < 1:2066051/125‑1 GACGTCGCCACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATA > 2:2440819/1‑135 GTCGCCACGCACAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTT > 1:3204669/1‑135 GTCGCCACGCAAAGTCAAAAAGAAGAAATAGAAATAGATCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATAACGAAGTTAGTTTTTGACCTAACTTAGTTTTTTATAGTT > 2:1741942/1‑135 CACGCCAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTGTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTGCGTTTTTTATAGTTGGTTA > 2:1850430/1‑135 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTA > 1:3385324/1‑135 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTA > 2:3505429/1‑135 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTA > 1:3495894/1‑135 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTA > 1:3840391/1‑135 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTA > 2:1710226/1‑135 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTA < 2:1570396/125‑1 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTT > 1:1067918/1‑83 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTT < 2:1067918/83‑1 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTG > 2:1544688/1‑67 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTA > 1:3665112/1‑62 CACGCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTT < 1:1561742/56‑1 CACGCAAAGGCAAAAAGATGAACTAGAAATAGATCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATCAATATATAATTTAGTTTTTCACCAAACTTAGTTTTTTAaatt > 1:3532419/1‑125 aagaAAAGTCAAAAACATGAACTATAAATATTTCATCTTTTTTTGTTTAAATCTTTTGATAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTA < 1:671839/130‑1 GCAAAGGCAAAAAGATGAACTCGAATTTGTTCTTCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTA < 1:3316593/135‑1 GCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTA < 2:515414/135‑1 GCAAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTA < 1:1305670/135‑1 GCAAAGGCAAAAAGATGAACTAGAAATAGATCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGACCTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTA < 2:3409921/135‑1 AAAGGCAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATA > 1:2762953/1‑135 CAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATA > 2:3373747/1‑135 CAAAAAGATGAACTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATA > 1:1005124/1‑135 GATGAACGACAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTATGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATA < 1:2287992/135‑1 CTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGATTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTG > 2:3663719/1‑135 CTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTG > 1:405232/1‑135 CTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTG > 1:1914398/1‑135 CTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTA > 1:472908/1‑116 CTAGAAATAGTTCATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTA < 2:472908/116‑1 ATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTGATTTGGATTCAA > 2:1277510/1‑134 ATCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGACTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTGATTTGGATTCAA > 1:1658690/1‑134 TCTTTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATATCTGATTTTGATTCAATT > 1:2164042/1‑135 TTTTTTGTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTGATTTGGATTCAATTCAT > 2:2816369/1‑135 |||||||||||||||||||||||||||||||||||||||| TACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3304‑3396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTAAATCTTTTGCTAAGTTGAACTAATAGAGTCTTTTATGAATATCGAAGTTAGTTTTTCACCTAACTTCGTTTTTTATAGTTGGTTATTATAAAATAGTAATATAGCTGATTTGGATTCAATTCATATTTA < AssemblyC74_contig_5/185954‑185821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |