| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_47 | 418 = | NA (NA) | 77 (0.080) | 7/246 | 1.8 | 100% | coding (417/879 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | AssemblyC74_contig_61 | 4 = | 0 (0.000) | coding (419/420 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein | |||||
TCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATCCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_47/524‑418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATC > AssemblyC74_contig_61/4‑122 TCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATCCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCA < 2:1930062/107‑1TCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATCCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCA > 1:1930062/1‑107 AAAGAGCCACAGCCATAAAACATATAAGTCATATTCTTAACTTTTGACTTATCCCATTTAATTACATCGATAGTGTTATATTTAACCCCTGCTAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:2976971/134‑1 AAAGAGCCACAGCCATAAAACATAGTAGTCATATTAGTAACATTTTACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACCTATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:2065320/134‑1 AAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 1:590970/134‑1 AAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAT > 1:1344272/1‑133 AAAGAGCCACAGCCATAAAACATAGAAGTCATATTCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAAT > 1:3110542/1‑133 ttCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 2:2639747/3‑101 ttCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 1:2639747/99‑1 AACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTCTCCCAATT > 1:2932995/1‑96 AACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAA > 2:2710646/1‑135 AACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:2932995/96‑1 AACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATAATTC < 2:2358210/67‑1 AACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATAATTC > 1:2358210/1‑67 CATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCAT < 1:2755713/63‑1 CATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCAT > 2:2755713/1‑63 GACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATC > 1:2602373/1‑98 GACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATC < 2:2602373/98‑1 GACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATC < 2:2602393/98‑1 GACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATC > 1:2602393/1‑98 CGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACA < 1:3736041/94‑1 CGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACA > 2:3736041/1‑94 CGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 1:352663/87‑1 CGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 2:352663/1‑87 aCAATTTCTACCATCTATATTTTTAGATTTAACACCTGAAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATAtt < 2:2249367/134‑3 CAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAAGTCATAttc > 1:2883964/1‑132 ACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGA < 1:2367848/51‑1 ACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGA > 2:2367848/1‑51 ACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAG < 2:2970430/50‑1 ACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCAT > 2:460150/1‑44 ACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCAT < 1:460150/44‑1 CTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTAC > 1:3164393/1‑76 CTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTAC < 2:3164393/76‑1 CTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 1:2022107/74‑1 CTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 2:2022107/1‑74 CATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGA < 1:2301449/46‑1 CATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGA > 2:2301449/1‑46 ATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:1598530/1‑69 ATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:1598539/1‑69 ATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:1598539/69‑1 ATCGATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:1598530/69‑1 GATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:1655821/66‑1 GATAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:1655821/1‑66 TAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCC < 2:1405957/59‑1 TAGTGTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCC > 1:1405957/1‑59 GTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:669854/60‑1 GTTAGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:669854/1‑60 AGATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATT < 1:2710646/135‑1 GATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:2606214/1‑56 GATTTAACCCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:2606214/56‑1 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGC > 2:1144660/1‑74 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGC < 1:1144660/74‑1 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTT < 2:3306767/67‑1 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTT > 1:3306767/1‑67 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATC < 1:1717655/57‑1 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:59247/48‑1 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:59247/1‑48 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGA < 1:3069928/36‑1 CCCTGCAAACATATCATTCATAGAAGTAACCTTCGA > 2:3069928/1‑36 CCCTGCAAACATATCATTCATAGAAGTAACCTTCG < 2:2115796/35‑1 CCCTGCAAACATATCATTCATAGAAGTAACCTTCG > 1:2115796/1‑35 CCCTGCAAACATAGCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATC > 2:79520/1‑135 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGT > 1:3235176/1‑60 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGT < 2:3235176/60‑1 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTA > 2:1424963/1‑47 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTA < 1:1424963/47‑1 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:2423924/42‑1 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:2491519/1‑42 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:2424411/1‑42 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT > 1:2423924/1‑42 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:2424411/42‑1 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCCAATT < 2:2491519/42‑1 AAACATATCATTCATAGAAGTAACCTTCGACGTATCCC < 1:559551/38‑1 AAACATATCATTCATAGAAGTAACCTTCGACGTATCC < 2:2367465/37‑1 AAACATATCATTCATAGAAGTAACCTTCGACGTATCC > 1:2367465/1‑37 AAACATATCATTCATAGAAGTAACCTTCGACGTATCC > 2:2337768/1‑37 AAACATATCATTCATAGAAGTAACCTTCGACGTATCC < 1:2337768/37‑1 TCATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGC > 1:3163150/1‑61 CATTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACAT > 2:2197506/1‑120 TCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATATCCGTAACATTTGACGTATCCCAATTACTTACATCGATAGTGTTAGATTTAACCCCTGCAAACATATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AssemblyC74_contig_47/524‑418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTCATAGAAGTAACCTTCGACGTATCCCAATTACTTACATCTACACTCGTTAAAGAGCCACAGCCATAAAACATAGAATTCATACTTGTAACATTTGACGTATCCCAATTACTTACATC > AssemblyC74_contig_61/4‑122 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |