| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_1 | = 443528 | 12 (0.030) | 2754 (1.810) +C |
157/246 | 0.0 | 99.8% | intergenic (+657/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Conserved hypothetical protein ArsC related/– |
| ? | AssemblyC74_contig_39 | = 1643 | 0 (0.000) | intergenic (‑5/–) | rasttk_feature_creation_tool=RNA_reps_SSU_rRNA/– | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/– | |||||
Only 100 of 2773 total aligned reads displayed.
TGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/443394‑443529 | atgaGGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa > 2:2370936‑M1/1‑132 (MQ=255) atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGta > 1:238745/1‑134 (MQ=255) atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGta > 2:1108063/1‑134 (MQ=255) atgaAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaa > 2:2039731‑M1/1‑132 (MQ=255) aaGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagat > 2:2148321‑M1/1‑129 (MQ=255) gACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttc > 1:2464057‑M1/1‑124 (MQ=255) gACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgt < 1:2787819‑M1/133‑10 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 2:840122‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:1063805‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 2:1252138‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:2739436‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:1284437‑M1/1‑115 (MQ=255) aaaCTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaacttttt > 1:3065912‑M1/1‑115 (MQ=255) aaCTGAACAACGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTAAAGACAACAAACA‑TTTTTAACAAGCACGCAATATGCTAGCAAACAACTTGAGCTTAACAATCGcaagattgttcgaacttttta < 2:1983573‑M1/135‑22 (MQ=255) cAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagag < 1:819706‑M1/134‑28 (MQ=255) aaaGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagt > 2:1029318‑M1/1‑107 (MQ=255) aaaGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtt > 1:2143678‑M1/1‑106 (MQ=255) aGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg < 2:2300404‑M1/135‑32 (MQ=255) gTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttga < 1:2989600‑M1/135‑33 (MQ=255) aaGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttga > 1:1000253‑M1/1‑101 (MQ=255) aaaCCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctgg > 2:777585‑M1/1‑96 (MQ=255) aaaCCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg > 1:3589360‑M1/1‑96 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 2:2743535‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:1558333‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcag > 1:1614865‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctgg > 1:723379‑M1/1‑91 (MQ=255) aaaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgt > 1:2228226‑M1/1‑91 (MQ=255) aaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcagg < 2:2806130‑M1/135‑45 (MQ=255) aaTGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcagg < 1:2533608‑M1/135‑45 (MQ=255) tgtAGGGCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaa > 2:3396514‑M1/1‑86 (MQ=255) ggCGTCTTGATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgct > 1:531419‑M1/1‑81 (MQ=255) ggCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACACGCAAGCAATATGCTAGCAAACAAATTGAGCTTAAAAATCGtaagattgttcgaacttttaatgagagtttgatcctggctcaggacgaacgct > 2:1771096‑M1/1‑82 (MQ=255) ggCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgct > 1:965491‑M1/1‑81 (MQ=255) ggCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgct > 2:2537246‑M1/1‑81 (MQ=255) ggCGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgct > 1:1895890‑M1/1‑81 (MQ=255) cGTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc > 2:2943246‑M1/1‑79 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:1615366‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:3867161‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:3457910‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:2595666‑M1/134‑57 (MQ=255) gTCTTGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1493505‑M1/134‑57 (MQ=255) tCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1123461‑M1/134‑57 (MQ=255) tCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:2243607‑M1/134‑57 (MQ=255) tCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 1:1697109‑M1/134‑57 (MQ=255) tGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg > 2:3738148‑M1/1‑75 (MQ=255) tGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg < 1:2009671‑M1/135‑61 (MQ=255) tGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt < 2:1338378‑M1/135‑62 (MQ=255) tGATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg > 2:2455645‑M1/1‑74 (MQ=255) gATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 2:3233611‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 2:1408602‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc > 2:700553‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagtttgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg > 1:2576064‑M1/1‑74 (MQ=255) gATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcg > 1:379526‑M1/1‑74 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt > 2:936742‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctg > 2:3702646‑M1/1‑73 (MQ=255) gATTCAATTCAAGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatactggctcaggacgaacgctggcggcgt > 1:1755581‑M1/1‑73 (MQ=255) tatattcaagacAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAACTTGAGCTTAACACTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcc < 2:1480957‑M1/131‑65 (MQ=255) caattcaaGACAACAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgccta < 1:90553‑M1/135‑67 (MQ=255) caaGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatac < 1:1823866‑M1/135‑71 (MQ=255) caaGACAACAAACA‑TTTTTAACAAGCAAGCAATATTCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaataca < 2:2088931‑M1/135‑72 (MQ=255) aaGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaataca > 2:3616723‑M1/1‑63 (MQ=255) aaGACAATAAACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaataca > 1:659428‑M1/1‑63 (MQ=255) caataaACA‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaa > 2:3010485‑M1/1‑59 (MQ=255) aaaca‑TTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttt > 1:1176590‑M1/1‑55 (MQ=255) aacatttttaacaAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcga < 2:3160838‑M1/131‑82 (MQ=255) acatttttaacAAGCAAGCACTATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctattacatgcaagtcgaa > 2:3535469‑M1/4‑53 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaa > 2:2677818‑M1/4‑53 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtc < 2:1848128‑M1/129‑80 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgt < 2:2893223‑M1/111‑62 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc < 2:1168039‑M1/106‑57 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctgg > 1:3306385‑M1/4‑53 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttg > 1:589951‑M1/4‑53 (MQ=255) acatttttaacAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttc > 1:3494704‑M1/4‑53 (MQ=255) ttttAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgct < 2:3809112‑M1/135‑87 (MQ=255) aaCAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggc > 2:509115‑M1/1‑45 (MQ=255) aaCAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtatgatcctggctcaggacgaacgctggc > 2:570831‑M1/1‑45 (MQ=255) aagcaaTATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccac > 1:1356500‑M1/1‑38 (MQ=255) agcaaTATGCTAGCAAACAAATTGAGCTTAACAATCGtatgattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcataatacatgcaagtcgaacgcttctttttcca < 1:2085738‑M1/133‑97 (MQ=255) agcaaTATGCTAGCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttcca < 1:3228373‑M1/133‑97 (MQ=255) aGCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctc > 1:3717389‑M1/1‑26 (MQ=255) gCAAACAAATTGAGCTTAACAATCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctcc < 2:191293‑M1/135‑111 (MQ=255) gCAAACAAATTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctcc < 1:3444700‑M1/135‑111 (MQ=255) aaacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccac > 1:3929870‑M1/1‑23 (MQ=255) aaacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccac > 1:459982‑M1/1‑23 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccacc > 2:3091814‑M1/1‑22 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctgg < 1:2670605‑M1/60‑39 (MQ=255) aacaaaTTGAGCTTAACAATCGcaagattgttcgaactttt > 1:1421935‑M1/1‑22 (MQ=255) acaaaTTGAGCTTAACAATCGccagattgttcgaactttttatgagagtttgatcctggctc > 1:2309189‑M1/1‑21 (MQ=255) acaaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccg > 1:3383543‑M1/1‑21 (MQ=255) caaaTTGAGCTTAACAATCGcaagattgttcgaacttttta < 2:623587‑M1/41‑22 (MQ=255) aaaTTGAGCTTAACAATCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccgga > 2:3297604‑M1/1‑19 (MQ=255) aaTCGtaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggc < 1:3156301‑M1/135‑131 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggc < 1:3658017‑M1/135‑131 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggc < 2:1558365‑M1/135‑131 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggc < 2:419308‑M1/135‑131 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaagagtggc < 1:195404‑M1/135‑131 (MQ=255) aaTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaagagtggc < 1:2922657‑M1/135‑131 (MQ=255) aTCGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggcg > 2:168862‑M1/1‑4 (MQ=255) cGcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggcgaa < 1:284310‑M1/135‑134 (MQ=255) gcaagattgttcgaactttttatgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgcttctttttccaccggagcttgctccaccggaaaaagaggagtggcgaac < 1:385489‑M1/135‑135 (MQ=255) | TGATGAAGTAGACCTTTGAAAACTGAACAAAGTAAGACAAACCAAATGTGTAGGGCGTCTTGATTCAATTCAAGACAACAAACATTTTTTAACAAGCAAGCAATATGCTAGCAAACAAATTGAGCTTAACAATCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_1/443394‑443529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |