New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_10 = 985640 (0.000)287 (0.630) 77/248 0.5 100% intergenic (‑281/–) rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– hypothetical protein/–
?AssemblyC74_contig_50 1 = 0 (0.000)intergenic (–/‑113) –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 –/Aggregation promoting factor

Only 100 of 287 total aligned reads displayed.

TCTTTTTTATAGAGAAAAATGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_10/98431‑98564
                                                                                                                                     |                                                                                                                                   
tCTTTTTTATAGAGAAAAATGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCg                                                                                                                                    <  2:1502043‑M1/135‑2 (MQ=255)
tCTTTTTTATAGAGAAAAATGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCg                                                                                                                                    <  1:999197‑M1/135‑2 (MQ=255)
                 aaTGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgt                                                                                                                   >  2:3308125‑M1/1‑117 (MQ=255)
                  aTGCATGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACACTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  <  1:1617268‑M1/135‑20 (MQ=255)
                  aTGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  <  2:1114967‑M1/135‑20 (MQ=255)
                  aTGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  <  1:3689525‑M1/135‑20 (MQ=255)
                  aTGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  <  1:1508785‑M1/135‑20 (MQ=255)
                  aTGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtaataaattgtc                                                                                                                  <  2:2906501‑M1/135‑20 (MQ=255)
                          tAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgct                                                                                                             <  2:1809230‑M1/132‑25 (MQ=255)
                           aaTACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttctt                                                                                                         >  2:279860‑M1/1‑107 (MQ=255)
                           aaTACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttctt                                                                                                         >  1:3475192‑M1/1‑107 (MQ=255)
                                tttCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  >  1:79387‑M1/1‑102 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  2:3791161‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  1:890042‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  2:1749182‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  2:462046‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  1:620540‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  1:2572310‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  2:1876638‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatga                                                                                               >  1:2405818‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctat                                                                                                 <  1:40002‑M1/133‑37 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctat                                                                                                 >  2:40002‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgctt                                                                                                            >  1:380921‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgctt                                                                                                            >  1:1369571‑M1/1‑97 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgctt                                                                                                            <  2:381269‑M1/122‑26 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  <  2:2219854‑M1/116‑20 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  <  1:2797393‑M1/116‑20 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  <  1:2818698‑M1/116‑20 (MQ=255)
                                     taaataaaTATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  >  2:2818698‑M1/1‑97 (MQ=255)
                                          aaataTTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatat                                                                                          >  1:2201568‑M1/1‑92 (MQ=255)
                                          aaataTTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatat                                                                                          >  2:3497841‑M1/1‑92 (MQ=255)
                                           aataTTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatatt                                                                                         <  2:2249226‑M1/135‑45 (MQ=255)
                                            atatTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAACAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattt                                                                                        <  2:1192215‑M1/135‑46 (MQ=255)
                                            atatTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattt                                                                                        <  1:2051819‑M1/135‑46 (MQ=255)
                                            atatTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatatt                                                                                         >  1:1041734‑M1/1‑90 (MQ=255)
                                            atatTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatatt                                                                                         >  1:1041710‑M1/1‑90 (MQ=255)
                                             tatTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatatttt                                                                                       <  2:1649589‑M1/135‑47 (MQ=255)
                                                   tGGTGAACAAAAACAAAAAATCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtg                                                                                 <  2:924291‑M1/135‑53 (MQ=255)
                                                   tGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtg                                                                                 <  1:3308125‑M1/135‑53 (MQ=255)
                                                   tGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtg                                                                                 <  1:2911725‑M1/135‑53 (MQ=255)
                                                     gTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattt                                                                                        >  1:2278103‑M1/1‑81 (MQ=255)
                                                        aacaaaaacaaaAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtc                                                                                                                  >  1:3870213‑M1/1‑78 (MQ=255)
                                                           aaaaacaaaaaAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagta                                                                         >  2:2476237‑M1/1‑75 (MQ=255)
                                                           aaaaacaaaaaAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagta                                                                         >  1:826351‑M1/1‑75 (MQ=255)
                                                           aaaaacaaaaaAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagta                                                                         >  1:1950516‑M1/1‑75 (MQ=255)
                                                            aaaacaaaaaAGCAATTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtat                                                                        <  1:1237858‑M1/135‑62 (MQ=255)
                                                            aaaacaaaaaAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtat                                                                        <  2:2944067‑M1/135‑62 (MQ=255)
                                                                    aaaGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgtt                                                                <  2:1459820‑M1/135‑70 (MQ=255)
                                                                     aaGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttg                                                               >  1:3768294‑M1/1‑65 (MQ=255)
                                                                          aGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaac                                                            <  1:2703701‑M1/133‑74 (MQ=255)
                                                                          aGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaac                                                            <  2:1257780‑M1/133‑74 (MQ=255)
                                                                                  taAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcc                                                                     >  1:3279272‑M1/1‑52 (MQ=255)
                                                                                  taAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcc                                                                     <  2:3279272‑M1/116‑65 (MQ=255)
                                                                                   aaaCGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataa                                                 >  1:3140691‑M1/1‑51 (MQ=255)
                                                                                   aaaCGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataa                                                 >  2:3099132‑M1/1‑51 (MQ=255)
                                                                                        tAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtg                                                                                 >  2:2375969‑M1/1‑46 (MQ=255)
                                                                                              ttttCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaac                                      <  2:3878843‑M1/135‑96 (MQ=255)
                                                                                              ttttCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaac                                      >  2:62649‑M1/1‑40 (MQ=255)
                                                                                              ttttCATTTCATAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaac                                      >  2:2203409‑M1/1‑40 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  2:967180‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:1904999‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:1826524‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  2:3547646‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:1755068‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:2189641‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:233962‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:519386‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:3176141‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:3197313‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:3572679‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:2980570‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaata                                 >  1:2393365‑M1/1‑35 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtat                                                                        <  1:303056‑M1/96‑62 (MQ=255)
                                                                                                   atttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtat                                                                        >  2:303056‑M1/1‑35 (MQ=255)
                                                                                                     ttcatAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaa                               <  1:1965828‑M1/135‑103 (MQ=255)
                                                                                                        atAGATTACTGTATTTATTACAAAAATCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaagga                            >  2:3848156‑M1/1‑30 (MQ=255)
                                                                                                         tAGATTACTGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggag                           >  2:885702‑M1/1‑29 (MQ=255)
                                                                                                                 tGTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttca                   >  2:2649512‑M1/1‑21 (MQ=255)
                                                                                                                  gTATTTATTACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcat                  >  2:1352200‑M1/1‑20 (MQ=255)
                                                                                                                   tatttattACAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatg                 <  1:3368875‑M1/135‑117 (MQ=255)
                                                                                                                      ttattaCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctagttgaacacaacaaataaaactttttaacgaataaaggagatttttcatg                 <  1:644428‑M1/132‑117 (MQ=255)
                                                                                                                      ttattaCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtg                                                                                 <  2:2289545‑M1/68‑53 (MQ=255)
                                                                                                                        attaCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatc            <  1:1259929‑M1/135‑122 (MQ=255)
                                                                                                                        attaCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatc            <  2:1041734‑M1/135‑122 (MQ=255)
                                                                                                                         ttaCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacat             >  2:3182775‑M1/1‑13 (MQ=255)
                                                                                                                         ttaCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacat             >  2:2024053‑M1/1‑13 (MQ=255)
                                                                                                                         ttaCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacat             >  2:2568550‑M1/1‑13 (MQ=255)
                                                                                                                           aCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataatggagatttttcatgacatcact         >  2:1686749‑M1/1‑11 (MQ=255)
                                                                                                                           aCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcact         >  2:659740‑M1/1‑11 (MQ=255)
                                                                                                                           aCAAAAAACGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatg                 >  1:3101737‑M1/1‑11 (MQ=255)
                                                                                                                             aaaaaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcactta       >  1:1537101‑M1/1‑9 (MQ=255)
                                                                                                                             aaaaaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcactta       >  1:2086147‑M1/1‑9 (MQ=255)
                                                                                                                             aaaaaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcactta       >  2:1908336‑M1/1‑9 (MQ=255)
                                                                                                                             aaaaaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcactta       >  1:1172297‑M1/1‑9 (MQ=255)
                                                                                                                              aaaaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcacttaa      >  2:3406927‑M1/1‑8 (MQ=255)
                                                                                                                              aaaaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcacttaa      >  1:3526358‑M1/1‑8 (MQ=255)
                                                                                                                              aaaaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcacttaa      >  2:2168885‑M1/1‑8 (MQ=255)
                                                                                                                                aaaCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcacttaa      >  1:566033‑M1/1‑6 (MQ=255)
                                                                                                                                  aCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattcctcgttgaacacaacaaataaaactttttaacgaataaaggagatttttcatgacatcacttaaaact  >  2:2995332‑M1/1‑4 (MQ=255)
                                                                                                                                  aCGCggatttgtcataaattgtcatgcttcttttacctatgaaatattttcacgtgttaaagtattactcgttgaacacaacaaataaaactttttaactaataaaggagatttttaatgacatcacataaaact  >  1:2102406‑M1/1‑4 (MQ=255)
                                                                                                                                     |                                                                                                                                   
TCTTTTTTATAGAGAAAAATGCAGGTTAATACTTTCTTAAATAAATATTTATGGTGAACAAAAACAAAAAAGCAAGTTTTATTAAACGTAACCCTTTTCATTTCATAGATTACTGTATTTATTACAAAAAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_10/98431‑98564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.