| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_19 | = 19031 | 0 (0.000) | 345 (0.640) | 87/248 | 0.3 | 100% | intergenic (+109/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Phage lysin, N‑acetylmuramoyl‑L‑alanine amidase (EC 3.5.1.28)/– |
| ? | AssemblyC74_contig_53 | = 622 | 0 (0.000) | coding (1/498 nt) | rasttk_feature_annotation_tool=annotate_proteins_si milarity | Mobile element protein | |||||
Only 100 of 347 total aligned reads displayed.
GGTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_19/18897‑19031 | gTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTt < 2:2892954‑M1/135‑2 (MQ=255) gCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaata < 1:3566187‑M1/135‑17 (MQ=255) cAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataa > 2:1818531‑M1/1‑118 (MQ=255) aaCGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataac > 1:3843400‑M1/1‑117 (MQ=255) aaCGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataac > 1:166234‑M1/1‑117 (MQ=255) cGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacga < 2:253603‑M1/135‑21 (MQ=255) aaaaaaTGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggc < 2:241192‑M1/135‑25 (MQ=255) aaaaaaTGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggc < 1:1907413‑M1/135‑25 (MQ=255) aaaaaaTGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggc < 1:100190‑M1/135‑25 (MQ=255) aaaaaaTGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGATTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggc < 1:1394125‑M1/135‑25 (MQ=255) ccTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaat > 1:1137498‑M1/1‑100 (MQ=255) ccTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAAGCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaat > 2:2130446‑M1/1‑100 (MQ=255) tgtgATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttg > 2:1833666‑M1/1‑94 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatat > 1:942847‑M1/1‑84 (MQ=255) aCCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatat > 1:489428‑M1/1‑84 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:2816845‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 1:3792513‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:3401586‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 2:967313‑M1/135‑54 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 2:3545697‑M1/135‑54 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 1:3149423‑M1/135‑54 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:3789257‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:577458‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 1:2348786‑M1/1‑82 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 1:1225705‑M1/135‑54 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatc < 1:2135273‑M1/119‑38 (MQ=255) cccAAAAGTTAGACTAGAAATCTAATTAAAAGGGGAGCTATTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca < 2:3878942‑M1/135‑54 (MQ=255) aaaaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat > 1:1943253‑M1/1‑79 (MQ=255) aaaaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat > 2:1942537‑M1/1‑79 (MQ=255) aaaaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat > 1:2417502‑M1/1‑79 (MQ=255) aaaaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat > 1:3254652‑M1/1‑79 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 2:3287963‑M1/1‑77 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 2:3502823‑M1/1‑77 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 1:691492‑M1/1‑77 (MQ=255) aaGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataa > 1:3709178‑M1/1‑77 (MQ=255) ttAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatc > 1:30735‑M1/1‑74 (MQ=255) ttAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatc > 1:2207095‑M1/1‑74 (MQ=255) ttAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaat < 2:3061408‑M1/130‑57 (MQ=255) ttAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatca > 2:1263058‑M1/1‑74 (MQ=255) ttAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTt > 1:969589‑M1/1‑74 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcatataaatatcaaataaatcgt < 2:1475685‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:2813980‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:691492‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:1336723‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:2818206‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:1876558‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:3704115‑M1/135‑64 (MQ=255) aGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatc < 2:3084324‑M1/133‑62 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 2:1742849‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 2:93690‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 2:2208421‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:716005‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:1821897‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:809821‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:199398‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:3902966‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:2914800‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgta > 1:2568666‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt > 2:1108130‑M1/1‑69 (MQ=255) cTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt > 1:1176730‑M1/1‑69 (MQ=255) aGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 2:752950‑M1/130‑64 (MQ=255) cTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttgg < 2:1645965‑M1/135‑75 (MQ=255) cTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttag < 2:3351977‑M1/135‑75 (MQ=255) cTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttag < 1:2263069‑M1/135‑75 (MQ=255) cTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttag < 1:3434417‑M1/135‑75 (MQ=255) cTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATAAATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttag < 2:3514692‑M1/135‑75 (MQ=255) aaaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattg < 2:3835502‑M1/135‑81 (MQ=255) aaaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacact < 2:1169045‑M1/123‑69 (MQ=255) aaaGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgg < 2:2791628‑M1/135‑82 (MQ=255) tGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaagg < 1:423618‑M1/134‑88 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt < 2:1993392‑M1/135‑91 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt > 1:1430321‑M1/1‑45 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt > 1:1629102‑M1/1‑45 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt < 2:3902966‑M1/135‑91 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatt < 2:1425220‑M1/135‑91 (MQ=255) cTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt > 1:2963242‑M1/1‑45 (MQ=255) tttttttGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:135014‑M1/107‑64 (MQ=255) tGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataact < 1:1067937‑M1/135‑98 (MQ=255) gCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacact > 2:3572850‑M1/1‑37 (MQ=255) cGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactat > 2:1562709‑M1/1‑36 (MQ=255) ataCATTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggtt < 2:2348786‑M1/135‑107 (MQ=255) aTTTGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttggga < 1:3401586‑M1/135‑111 (MQ=255) tttGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataactcgtacactggttagacattgggtaaggatttataactatcatggttgggaa < 2:1223302‑M1/135‑112 (MQ=255) tttGTTTTTAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaa < 2:3758151‑M1/135‑112 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggct > 2:3002637‑M1/1‑20 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggct > 1:253570‑M1/1‑20 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaa > 2:2942118‑M1/1‑20 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcagggttgggaaggct > 1:881757‑M1/1‑20 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattggg > 2:2460694‑M1/1‑20 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattggg > 1:1814625‑M1/1‑20 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgt < 1:2464491‑M1/83‑64 (MQ=255) tttttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatagcaaataaatcgtacactggttagacagtgggtaggggtgtatcactatcatggtggggcaggct > 2:3622758‑M1/1‑20 (MQ=255) tttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttg > 1:3305006‑M1/1‑18 (MQ=255) tttAAGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttg > 2:858421‑M1/1‑18 (MQ=255) ttAAGAAAAAAGTAGTTtcagactatttaaataacgaag < 2:325141‑M1/39‑23 (MQ=255) aaGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggtt > 2:1617312‑M1/1‑15 (MQ=255) aaGAAAAAAGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggtt > 2:2627702‑M1/1‑15 (MQ=255) aaaGTAGTTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggttggaggt < 1:2710172‑M1/135‑127 (MQ=255) gtTtcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggttggaggtggcaa < 1:3622758‑M1/134‑132 (MQ=255) ttcagactatttaaataacgaaggcggctacaaatatcttgcacataaatatcaaataaatcgtacactggttagacattgggtaaggatttataactatcatggttgggaaggcttggttggaggtggcaaaag < 1:3502823‑M1/135‑135 (MQ=255) | GGTATTTAAATATTCCGCAACGATAAAAAATGGCCCCTCGTTGTGATGTGCACCCCAAAAGTTAGACTAGAAATCTAATTAAAAGGGGTGCTTTTTTTGCGGAAATATACATTTGTTTTTAAGAAAAAAGTAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_19/18897‑19031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |