| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | 1 = | 0 (0.000) | 523 (0.400) +TTTAACAACTAATGTTGTT |
77/210 | 0.0 | 72.2% | intergenic (–/‑269) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | AssemblyC74_contig_63 | = 176 | 476 (0.790) | intergenic (+2/‑26) | rasttk_feature_creation_tool=tRNAscan‑SE/rasttk_feature_creation_tool=tRNAscan‑SE | tRNA‑Ala‑TGC/tRNA‑Met‑CAT | |||||
Only 100 of 2105 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGATTTTA > AssemblyC74_contig_31/1‑135 | attggggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacacttt < 1:338600‑M1/2‑1 (MQ=255)attggggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacacttt < 1:857668‑M1/2‑1 (MQ=255) ggtgaagtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTc < 2:1390787‑M1/7‑1 (MQ=255) agtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGa < 1:531111‑M1/12‑1 (MQ=255) gtcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGa > 2:2306370‑M1/123‑134 (MQ=255) tcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagagttttactctcaaacactTTTGTTCATTGaa < 1:1667370‑M1/13‑1 (MQ=255) tcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGaa < 2:3036678‑M1/13‑1 (MQ=255) tcgtaacaaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGaa < 2:1998262‑M1/13‑1 (MQ=255) caaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGa < 2:3722414‑M1/20‑1 (MQ=255) caaggtagccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGa < 2:2678163‑M1/20‑1 (MQ=255) actctcaatttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATAttt < 1:3674892‑M1/25‑1 (MQ=255) agccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTg < 1:3728303‑M1/26‑1 (MQ=255) gccgtatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcatttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGa < 2:312619‑M1/27‑1 (MQ=255) gtatcggaaggtgcggctggatcacctcctatctaaggaatattacggagactacacaaattgtttttactgtgttcagttttgagaggtttactctcaaacactTTTGTTCAGTGAAAACTGGATATTTGAAGt < 1:1819796‑M1/30‑1 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATAttt < 2:2725937‑M1/25‑1 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 1:3597900‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 1:3334330‑M1/105‑135 (MQ=255) tatcggaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa < 1:1042451‑M1/31‑1 (MQ=255) tcggaaggtgcggctggatcagctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaactctTTTGTTCATTGAAAACTGGATATTTGAAgtata > 1:2030450‑M1/103‑133 (MQ=255) ttaaaacggggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATAttt < 2:718716‑M1/25‑1 (MQ=255) gaaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgt < 2:3293337‑M1/36‑1 (MQ=255) aaggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgta < 2:1074093‑M1/37‑1 (MQ=255) aggtgcggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgta > 1:209846‑M1/98‑134 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:1459025‑M1/94‑135 (MQ=255) gggccttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:2620967‑M1/94‑135 (MQ=255) cggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:1912118‑M1/93‑134 (MQ=255) cggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 2:940016‑M1/93‑134 (MQ=255) cggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 1:1267514‑M1/93‑134 (MQ=255) ggctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa < 1:320220‑M1/44‑1 (MQ=255) gctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa > 2:1187841‑M1/91‑134 (MQ=255) gctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa > 1:2448655‑M1/91‑134 (MQ=255) cttagctcagctgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACa < 2:1544560‑M1/46‑1 (MQ=255) ctggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa > 1:17429‑M1/90‑120 (MQ=255) ggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACaa > 1:2242649‑M1/88‑134 (MQ=255) ggatcacctcctttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACaa > 2:1003315‑M1/88‑134 (MQ=255) tgggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAac < 1:1193435‑M1/56‑1 (MQ=255) tttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACAcc > 1:3053982‑M1/77‑135 (MQ=255) tttctaaggaatattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACAcc > 2:3921433‑M1/77‑135 (MQ=255) ggagagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAacac < 2:1848259‑M1/58‑1 (MQ=255) gagcgcctgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACcgcg < 1:1439042‑M1/62‑1 (MQ=255) tgctttgcacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAAtt < 2:1128494‑M1/69‑1 (MQ=255) atattacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGaa > 1:1966461‑M1/67‑133 (MQ=255) attacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTg > 2:44770‑M1/65‑135 (MQ=255) attacggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTg < 2:3657318‑M1/71‑1 (MQ=255) acggagactacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGaaa > 1:276529‑M1/62‑135 (MQ=255) cacgcaggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGc > 2:2391680‑M1/60‑135 (MQ=255) caggaggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 2:130870‑M1/56‑135 (MQ=255) ctacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc < 2:1249598‑M1/81‑1 (MQ=255) tacacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAAc > 1:71325‑M1/54‑134 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTa < 1:401899‑M1/31‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 2:2060079‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaa < 1:3269848‑M1/83‑1 (MQ=255) acacaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACAGAGAACACCGCGTTGAATTTGAAAGCTgaag < 1:1511018‑M1/81‑2 (MQ=255) aggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGACCACCGCGTTGAATTTGAAAGCTGAACaaa < 1:2174976‑M1/84‑1 (MQ=255) aggtcagcggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACaaa < 1:1882449‑M1/84‑1 (MQ=255) acaatttgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAAt < 1:3771085‑M1/85‑1 (MQ=255) caatttgttttgactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAAtt > 2:3586797‑M1/50‑135 (MQ=255) tgtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGttt < 2:2212216‑M1/90‑1 (MQ=255) gtttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTg < 1:3827993‑M1/26‑1 (MQ=255) ggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATa < 2:1610187‑M1/44‑1 (MQ=255) ggttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa < 1:3535029‑M1/91‑1 (MQ=255) tttttactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa < 2:87776‑M1/91‑1 (MQ=255) gttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa > 1:464682‑M1/43‑133 (MQ=255) ttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa < 1:793730‑M1/91‑1 (MQ=255) ttcgatcccgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGcc < 1:3438253‑M1/94‑1 (MQ=255) tactttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGa < 2:2141205‑M1/97‑1 (MQ=255) actttgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGa < 1:2505353‑M1/97‑1 (MQ=255) tgttcagttttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa > 2:3783618‑M1/34‑124 (MQ=255) cgctaggctccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCaa > 1:579300‑M1/34‑135 (MQ=255) tccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGc > 1:3153585‑M1/26‑134 (MQ=255) tccattaacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGc > 1:2376516‑M1/26‑134 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAATTGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 2:497390‑M1/25‑133 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 1:2689451‑M1/25‑133 (MQ=255) ttgagaggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGc > 1:1104853‑M1/25‑133 (MQ=255) taacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTa > 1:1382003‑M1/21‑111 (MQ=255) taacaacattagttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGAc < 1:2995381‑M1/113‑1 (MQ=255) ggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGACCACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc < 2:3519706‑M1/117‑1 (MQ=255) ggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc < 1:1325208‑M1/117‑1 (MQ=255) ggtttactctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc < 2:638189‑M1/117‑1 (MQ=255) ggtttactctcaaacactTTTGTTCATTGAAAACTGGATATGTGAAGTAAATGTAAGTAATACAAACCGAGAACCCCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGcc < 2:55996‑M1/117‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 1:1001019‑M1/122‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 1:2922931‑M1/122‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 1:632138‑M1/122‑1 (MQ=255) actctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 2:281376‑M1/122‑1 (MQ=255) tctcaaacactTTTGTTCATTGAAAACTGGATAtt < 2:2980887‑M1/24‑1 (MQ=255) tctcaaacactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATaaa < 2:3358971‑M1/122‑1 (MQ=255) agttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGaa > 2:1684269‑M1/11‑90 (MQ=255) agttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGcc < 1:2570237‑M1/94‑1 (MQ=255) agttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCgg > 2:3205354‑M1/11‑121 (MQ=255) agttgttaaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATc < 2:2883018‑M1/125‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGa < 2:3433657‑M1/72‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:3845648‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:2619959‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:2860047‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 1:1580364‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGGAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:177931‑M1/131‑1 (MQ=255) cactTTTGTTCATTGAAAACTGGATATATGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGAt < 2:2486150‑M1/131‑1 (MQ=255) aaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATgtaagtaa > 1:947879‑M1/4‑45 (MQ=255) aaaTTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATCTTTGAtt < 2:2553175‑M1/132‑1 (MQ=255) tttGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTAAAGCAAAATAGGCGGACGGCTATAAAATCTTTGATTTTa > 2:803247/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGTTCATTGAAAACTGGATATTTGAAGTAAATGTAAGTAATACAAACCGAGAACACCGCGTTGAATTTGAAAGCTGAACAAATTGTTTAGCCTGAAGCAAAATAGGCGGACGGCCATAAAATCTTTGATTTTA > AssemblyC74_contig_31/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |