| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_1 | 443402 = | 1381 (3.300) | 276 (0.730) | 65/248 | 1.7 | 28.6% | intergenic (+531/–) | rasttk_feature_annotation_tool=annotate_proteins_si milarity/– | Conserved hypothetical protein ArsC related/– |
| ? | AssemblyC74_contig_6 | = 168934 | 0 (0.000) | intergenic (+543/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)/– | |||||
Only 100 of 276 total aligned reads displayed.
ATAACAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_6/168801‑168934 | aTAACAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATt > 2:557420‑M2/1‑134 (MQ=255)aTAACAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATt > 2:3329201‑M2/1‑134 (MQ=255) aCAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtag < 2:275679‑M2/134‑4 (MQ=255) aaTAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacc > 2:911774‑M2/1‑129 (MQ=255) aGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttga < 2:43962‑M2/135‑12 (MQ=255) aGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttga > 2:2978207‑M2/1‑124 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:2409751‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:262018‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:2295155‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:2278500‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:2839946‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:1661729‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:531449‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:435330‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact < 2:3922231‑M2/135‑17 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:60283‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 1:1179671‑M2/1‑119 (MQ=255) atatgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGATTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:363953‑M2/1‑119 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:862926‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 2:134796‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:3867161‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 1:3588842‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaa < 2:3234944‑M2/135‑20 (MQ=255) tgataATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttga > 2:3360262‑M2/1‑116 (MQ=255) aaTCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaa > 2:1917059‑M2/1‑112 (MQ=255) aaTCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaa > 2:366308‑M2/1‑112 (MQ=255) tCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagt < 1:2654238‑M2/135‑26 (MQ=255) cAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta > 1:336494‑M2/1‑109 (MQ=255) cAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta < 1:2796228‑M2/135‑27 (MQ=255) cAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta > 1:3663801‑M2/1‑109 (MQ=255) gTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaaga > 1:3922231‑M2/1‑106 (MQ=255) gctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagaca < 2:2720754‑M2/134‑32 (MQ=255) ctgctAATGAGTTGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaa > 2:208077‑M2/1‑102 (MQ=255) ctgctAATGAGTGGCAAAGACGTTTAGAGAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaa > 2:76558‑M2/1‑102 (MQ=255) ctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaa > 2:3749009‑M2/1‑102 (MQ=255) ctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaa > 1:3395073‑M2/1‑102 (MQ=255) ctgctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta > 1:3654575‑M2/1‑102 (MQ=255) gctAATGAGTGTCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 2:3025485‑M2/1‑100 (MQ=255) gctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaacc < 2:2354968‑M2/135‑36 (MQ=255) gctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaacc < 1:1069008‑M2/135‑36 (MQ=255) gctAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 2:2232167‑M2/1‑100 (MQ=255) gctAATGAGTGGAAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 1:1885750‑M2/1‑100 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 1:1524450‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 1:1826404‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtaggg < 2:347261‑M2/135‑48 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac < 1:2732308‑M2/122‑35 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaa > 2:2380429‑M2/1‑88 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagaca < 1:1261228‑M2/119‑32 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta > 2:2564468‑M2/1‑88 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta < 1:2564468‑M2/114‑27 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:2636880‑M2/1‑88 (MQ=255) cAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact < 1:1039647‑M2/104‑17 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcg > 2:869765‑M2/1‑86 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggc < 2:1741188‑M2/134‑49 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 2:3318414‑M2/1‑86 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagta > 2:3211056‑M2/1‑86 (MQ=255) aaGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagaccattgaaaactgaacaaagtaagacaaaccaaatgtgtagggc < 1:961826‑M2/134‑49 (MQ=255) aCGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtct < 1:3395678‑M2/135‑53 (MQ=255) tttAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaacctaatgtgtagggcgtcttg < 2:2903812‑M2/134‑55 (MQ=255) tttAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaacctaatgtgtagggcgtcttg > 1:2903812‑M2/1‑80 (MQ=255) tttAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttga < 2:3411160‑M2/135‑56 (MQ=255) aGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattc < 1:764155‑M2/135‑59 (MQ=255) aCAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagaca > 1:3444896‑M2/1‑66 (MQ=255) gACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaa < 1:715916‑M2/135‑84 (MQ=255) aCATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaac > 1:1879000‑M2/1‑51 (MQ=255) aCATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaac > 1:1992610‑M2/1‑51 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcgagacaacaaacatttttaacaa > 1:3132252‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaa > 1:3234944‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaa > 2:3130250‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaa > 2:1488180‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaaca > 1:1701366‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaaca > 2:3395262‑M2/1‑49 (MQ=255) aTTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaaca > 2:1069008‑M2/1‑49 (MQ=255) tctcTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagc > 2:122961‑M2/1‑47 (MQ=255) cttctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaag < 1:2984369‑M2/135‑92 (MQ=255) ctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagaca > 1:1400384‑M2/1‑41 (MQ=255) ctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact > 2:3159850‑M2/1‑41 (MQ=255) ctGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaact < 1:3159850‑M2/57‑17 (MQ=255) aaTCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaata < 1:2013613‑M2/134‑97 (MQ=255) tCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgc > 1:3319191‑M2/1‑36 (MQ=255) tCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgc > 1:1354440‑M2/1‑36 (MQ=255) aaGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagca < 2:1480885‑M2/134‑105 (MQ=255) aaGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagca < 1:2338610‑M2/134‑105 (MQ=255) aaGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagca < 1:2169814‑M2/134‑105 (MQ=255) aaGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagca < 1:203588‑M2/134‑105 (MQ=255) aaGATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttg < 2:2962222‑M2/84‑55 (MQ=255) gATTAAAGAGTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaac > 1:2829408‑M2/1‑28 (MQ=255) gagTTGTTGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttt < 1:471362‑M2/101‑81 (MQ=255) gttgttGAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagc < 2:2440713‑M2/135‑117 (MQ=255) gttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagctt > 1:2354968‑M2/1‑16 (MQ=255) ttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaa < 1:16475‑M2/135‑121 (MQ=255) ttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaa < 1:2121591‑M2/135‑121 (MQ=255) ttgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttt < 2:703435‑M2/95‑81 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcacacaaattgagcttaac < 2:1361111‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 2:188211‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 1:3300858‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 1:2163504‑M2/135‑122 (MQ=255) tgAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaac < 2:671770‑M2/135‑122 (MQ=255) gAAACAAAAAGATtagacctttgaaaactgaacaaagtaagacaaac > 1:658196‑M2/1‑13 (MQ=255) aaaaGATtagacctttgaaaactgaacaaagtaagacaaaccaaatgtgtagggcgtcttgattcaattcaagacaacaaacatttttaacaagcaagcaatatgctagcaaacaaattgagcttaacaatcgca < 1:607451‑M2/135‑129 (MQ=255) | ATAACAATAAAGATGATATGATAATCAAGTCGCTGCTAATGAGTGGCAAAGACGTTTAGAAAAAATAAACAAAGAAGTTGTTGACATTCTCTTCTGAATCTGATAAGATTAAAGAGTTGTTGAAACAAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_6/168801‑168934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |