| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_20 | = 15862 | 0 (0.000) | 308 (0.320) +AAAAAAAGATGAACTATTTCTAGTTCATCTTTTTGCCTTT |
66/168 | 0.2 | 100% | intergenic (+12/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15)/– |
| ? | AssemblyC74_contig_31 | = 3396 | 0 (0.000) | noncoding (118/118 nt) | rasttk_feature_creation_tool=RNA_reps_5S_rRNA | 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation | |||||
Only 100 of 2288 total aligned reads displayed.
TAAAAGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3263‑3396 | aaCACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgtta < 2:1873236‑M1/134‑9 (MQ=255) caccacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcc < 2:3775229‑M1/135‑12 (MQ=255) accacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcca < 2:593632‑M1/135‑13 (MQ=255) accacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaag < 2:3509584‑M2/135‑13 (MQ=255) accacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaag < 1:889040‑M2/135‑13 (MQ=255) accacAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGACACGCttaagttatcca < 2:1948297‑M1/135‑13 (MQ=255) tgtgGTTGCGATAGCGAGAAGGATACACCTGAAAACATTCCGAACACATAAGTAAAGCTTCTTAGAGCCGATTGGAGTGAGGGGTTGCCCCTAGTGAGAGTAGGACGTCGCCACGCttaagttatccatggagga > 2:847268‑M1/1‑116 (MQ=255) tggtggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagc < 2:2657339‑M1/134‑21 (MQ=255) ggtggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctc > 1:1578738‑M1/1‑113 (MQ=255) tggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttag > 2:1177921‑M1/1‑111 (MQ=255) tggCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGAGTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcag > 1:122449‑M1/1‑111 (MQ=255) cGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctc > 2:936598‑M1/1‑108 (MQ=255) aTAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagtt < 1:952356‑M2/135‑30 (MQ=255) tAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtt < 2:2177731‑M1/107‑3 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagt > 2:3388605‑M1/1‑103 (MQ=255) gCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttc < 2:2479370‑M2/133‑31 (MQ=255) gagaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctggga > 1:1000072‑M1/1‑101 (MQ=255) gagaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtag > 1:3490273‑M1/1‑101 (MQ=255) agaAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctggg < 1:204472‑M1/133‑34 (MQ=255) ggATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagc > 2:1130911‑M1/1‑96 (MQ=255) tACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttg < 2:2738190‑M1/134‑42 (MQ=255) acacCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgac < 2:1579865‑M1/134‑43 (MQ=255) acacCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgac < 2:2108621‑M1/134‑43 (MQ=255) acCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttt > 2:2789448‑M2/1‑90 (MQ=255) tGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgcctta > 1:3323895‑M1/1‑87 (MQ=255) aCCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcat > 2:2381295‑M1/1‑83 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagc > 2:327368‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagc > 2:1006681‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaa > 2:1299245‑M1/1‑82 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatctttt < 1:533199‑M1/135‑54 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagt < 1:80953‑M2/135‑54 (MQ=255) ccATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactag < 1:2701250‑M2/103‑22 (MQ=255) aTGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggttta < 2:3193190‑M1/102‑23 (MQ=255) gCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgt < 2:3592365‑M1/135‑58 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 1:1732812‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt > 1:1973465‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggt < 1:2418074‑M1/135‑61 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaag > 2:2037881‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttac < 2:3869166‑M1/124‑50 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatc > 2:2963286‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctg > 1:426645‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcca < 2:1786248‑M1/87‑13 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatcca < 1:3201735‑M1/87‑13 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgttgtcgt > 1:2130022‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcg > 2:2869019‑M1/1‑75 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaa < 1:1058704‑M2/135‑61 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaa < 1:2208129‑M2/135‑61 (MQ=255) gAACACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgc > 1:3275395‑M1/1‑75 (MQ=255) aaCACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaac > 1:1364643‑M2/1‑74 (MQ=255) aaCACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctc > 2:3058985‑M1/1‑74 (MQ=255) aaCACAGAAGTTAAGCTTCTTAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctc < 1:3059102‑M1/96‑23 (MQ=255) caGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcg < 2:731214‑M1/135‑66 (MQ=255) aGTTAAGCTTCTTAGCGCGGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatatttttttatttttattaagttaaagaacggattaaa < 2:2585994‑M2/135‑70 (MQ=255) aGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgtaggttcga > 1:3786756‑M1/1‑66 (MQ=255) gTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCAAGCttaagttatccatggaggttttgctcagctgggagagcatctgccttacaagcagagggtcagcggtt < 1:1453655‑M1/133‑69 (MQ=255) gCTTCTTAGCGCCGATTGTAGTGTGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCTCGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatccc < 2:1525350‑M1/135‑76 (MQ=255) cttcttAGCGCCAATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgtaggttcgagtcctac > 1:313717‑M1/1‑59 (MQ=255) tcttAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtttagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgtt < 1:3544718‑M1/135‑79 (MQ=255) ttAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtc > 2:2246657‑M2/1‑55 (MQ=255) ccGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctcca < 2:1454833‑M1/135‑87 (MQ=255) tGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaatatgaactagaattcgttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaa < 1:2895721‑M1/135‑92 (MQ=255) gTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaag > 1:17897‑M1/1‑43 (MQ=255) aGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgtt < 2:173516‑M1/134‑98 (MQ=255) aGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtt > 2:3662963‑M2/1‑37 (MQ=255) aGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagt > 1:3376258‑M2/1‑37 (MQ=255) aGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagt > 2:545112‑M2/1‑37 (MQ=255) gggTTGCCCCTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggta < 1:1136118‑M1/65‑31 (MQ=255) ttGCCCCTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctca > 2:1226111‑M1/1‑32 (MQ=255) ttGCCCCTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttc > 1:2365785‑M1/1‑32 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagtt > 2:394519‑M1/1‑29 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgt < 1:3723873‑M1/86‑58 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgt > 2:3723873‑M1/1‑29 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagt > 1:666178‑M2/1‑29 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagt < 2:666178‑M2/126‑98 (MQ=255) ccccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattt < 2:449369‑M2/113‑85 (MQ=255) ccTTGTGAGAGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggtt > 1:2762594‑M1/1‑27 (MQ=255) ccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaa < 2:3322835‑M2/135‑109 (MQ=255) ccTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaa < 1:3438056‑M2/135‑109 (MQ=255) cTTGTGAGAGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcacctaac < 1:2989969‑M1/135‑110 (MQ=255) gagaGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagc > 1:1176959‑M1/1‑21 (MQ=255) gagaGTAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagca < 2:2316759‑M1/60‑40 (MQ=255) gagaGTAGGACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcgtt < 2:1655882‑M2/135‑115 (MQ=255) tAGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagc < 1:2636856‑M1/109‑94 (MQ=255) aGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatct > 1:1663096‑M1/1‑15 (MQ=255) aGGACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatct > 1:187205‑M1/1‑15 (MQ=255) aGGACGTCGCCACGCtgatgttattccggcatagctcagt > 1:728583‑M1/1‑15 (MQ=255) gACGTCGCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgact > 1:596913‑M1/1‑13 (MQ=255) gACGTCGCCACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaatttaaagaaaggattcaattgcagcggtcattttcaatggagaagtttgtggttcaaatcgttcgattact < 1:3665992‑M2/135‑123 (MQ=255) aCGTCGCCACGCtgatgttattccggcatagctcagttggtagtagcgcatgactgttaatcatgatgtcgtaggttcgagtcctac < 2:1364871‑M1/87‑76 (MQ=255) gCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaat < 1:2293520‑M1/135‑129 (MQ=255) gCCACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaa < 1:2802568‑M1/134‑128 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaatca > 1:3900563‑M1/1‑5 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaatca > 2:1047526‑M1/1‑5 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaat > 2:3132725‑M1/1‑5 (MQ=255) cACGCttaagttatccatggaggtttagctcagctgggaga > 2:3460432‑M1/1‑5 (MQ=255) cACGCttaagttaaccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatcagccgatagctcagttggtagagcatctgacttttaatca > 1:3590723‑M1/1‑5 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcacctaacttcgttttttatagttggtta > 1:1288019‑M1/1‑5 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttgtttaaatcttttgctaagttgaactaatagagtcttttatgaatatcgaagttagtttttcacctaacttcgttttttatagttggtta > 1:2581970‑M1/1‑5 (MQ=255) cACGCaaaggcaaaaagatgaactagaaatagttcatctttttttatttttattaagttaaagaacggattcaattgcagcggtcattttcaatggagaagtttgtggtgcaaatcgttcgattactttgccat < 1:2497652‑M2/134‑130 (MQ=255) aCGCttaagttatccatggaggtttagctcagctgggagagcatctgccttacaagcagagggtcagcggttcgatcccgttaacctccatatgagccgttagctcagttggtagagcatctgacttttaatca < 1:1520896‑M1/134‑131 (MQ=255) | TAAAAGATAACACCACAGTGTGGTGGCGATAGCGAGAAGGATACACCTGTAACCATGCCGAACACAGAAGTTAAGCTTCTTAGCGCCGATTGTAGTGAGGGGTTGCCCCTTGTGAGAGTAGGACGTCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AssemblyC74_contig_31/3263‑3396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |