| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AssemblyC74_contig_31 | 1 = | 0 (0.000) | 1321 (0.540) +AGTGT |
143/238 | 0.6 | 100% | intergenic (–/‑269) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | AssemblyC74_contig_39 | 1 = | 0 (0.000) | intergenic (–/+65) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 1738 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAATCATCTAT > AssemblyC74_contig_39/1‑135 | agattttatggccgtccgcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTga < 2:2123764‑M2/4‑1 (MQ=255) ttttatggccgtccgcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGagag > 2:1081468‑M2/129‑135 (MQ=255) tttatggccgtccgcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGt < 1:1001019‑M2/8‑1 (MQ=255) tttatggccgtccgcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGt < 1:632138‑M2/8‑1 (MQ=255) tttatggccgtccgcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGt < 1:2922931‑M2/8‑1 (MQ=255) tttatggccgtccgactattttgcttcagtctatacaatttgttcagctttcaaattcaacgcggtgttctcgttttgtattacttacatttacttcaactatccagttttcaatgaacaaaagtgtTTGAGAGt < 2:1632525‑M2/8‑1 (MQ=255) ggccgtccgcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAAcc < 1:2636001‑M2/13‑1 (MQ=255) ggccgtccgcctattttgcttcaggctaaacaatttgttcagctttcaaagtcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAAcc < 2:2262597‑M2/13‑1 (MQ=255) gcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcgttgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCaa > 2:2387892‑M2/115‑133 (MQ=255) gcctattttgcttcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCaa > 1:162570‑M2/115‑133 (MQ=255) tcaggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGt < 1:89983‑M2/32‑1 (MQ=255) aggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTaaa < 2:2946549‑M2/35‑1 (MQ=255) aggataaacaatttgttcagctttcaacttcaacgcggtgttcacggtttgtcttacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTaaa < 2:457445‑M2/35‑1 (MQ=255) ggctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTaaa > 2:1032974‑M2/100‑134 (MQ=255) ctaaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAAc > 2:3160719‑M2/98‑135 (MQ=255) taaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAAc < 1:510937‑M2/38‑1 (MQ=255) taaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAAc < 1:3063634‑M2/38‑1 (MQ=255) taaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAAc < 1:3474916‑M2/38‑1 (MQ=255) taaacaatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAAc < 2:36855‑M2/38‑1 (MQ=255) caatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAAtt < 1:3642071‑M2/43‑1 (MQ=255) aatttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATtg > 1:1738686‑M2/92‑135 (MQ=255) ttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 2:1398064‑M2/47‑1 (MQ=255) ttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 1:2174327‑M2/47‑1 (MQ=255) ttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 2:1838494‑M2/47‑1 (MQ=255) ttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 1:1952329‑M2/47‑1 (MQ=255) ttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 2:3021896‑M2/47‑1 (MQ=255) ttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 2:3255310‑M2/47‑1 (MQ=255) ttgttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 2:3927517‑M2/47‑1 (MQ=255) ttgttaatggagcctagcgggatcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt > 2:1461487‑M1/89‑135 (MQ=255) ttgttaatggagcctagcgggatcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt > 1:3567766‑M1/89‑135 (MQ=255) gttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTa > 2:934096‑M2/87‑134 (MQ=255) gttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGAAAAAACAAATTGTGTa > 2:3471471‑M2/87‑134 (MQ=255) ttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGt < 1:1395696‑M2/8‑1 (MQ=255) ttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAAtt < 1:2234423‑M2/43‑1 (MQ=255) ttcagctttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTa > 2:1787785‑M2/86‑133 (MQ=255) aatggagcctagcgggatcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt < 2:1256142‑M1/47‑1 (MQ=255) aatggagcctagcgggatcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGtc < 1:1087479‑M1/51‑1 (MQ=255) ggagcctagcgggatcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCg < 2:646674‑M1/55‑1 (MQ=255) ttcaaattcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGt < 2:3816081‑M2/56‑1 (MQ=255) agcctagcgggatcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACaaa > 2:3387819‑M1/79‑108 (MQ=255) tagcgggatcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAg < 2:870067‑M1/49‑1 (MQ=255) attcaacgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATAtt < 1:2755268‑M2/62‑1 (MQ=255) cgcggtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAg > 1:2711473‑M2/68‑135 (MQ=255) atcgaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTa > 2:261765‑M1/68‑134 (MQ=255) ggtgttctcggttagtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGGAATATTCCTTAGaaa > 2:2873905‑M2/65‑135 (MQ=255) gaaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACACAGTCCAATCAAATTGTGTAGTCTCCGTAATattcctttgaca < 2:3541484‑M1/71‑6 (MQ=255) gtgttctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAag < 1:2561788‑M2/72‑1 (MQ=255) aaccgctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAag < 1:3184757‑M1/72‑1 (MQ=255) gctgacctcctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGGAATATTCCTTAGAAaggagg < 1:235667‑M1/76‑1 (MQ=255) ctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAaggagg < 1:1032932‑M2/76‑1 (MQ=255) ctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAaggagg < 1:2023107‑M2/76‑1 (MQ=255) ctcggtttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGt < 2:2204813‑M2/77‑1 (MQ=255) ttgtattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATcc > 2:3748310‑M2/53‑134 (MQ=255) ctgcgtgcaaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGc < 2:2676722‑M1/85‑1 (MQ=255) tattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGtct < 1:1224074‑M2/52‑1 (MQ=255) tattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGc > 2:1187841‑M2/50‑134 (MQ=255) tattacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGc > 1:3300415‑M2/50‑134 (MQ=255) ttacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCg > 2:3882469‑M2/48‑134 (MQ=255) ttacttacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCg > 1:1279889‑M2/48‑134 (MQ=255) caaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCt > 1:2494242‑M1/44‑135 (MQ=255) tacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTgtgt > 1:3366451‑M2/43‑89 (MQ=255) tacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCt > 1:209846‑M2/43‑134 (MQ=255) tacatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCt > 1:1858147‑M2/43‑134 (MQ=255) aaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCt < 1:1340499‑M1/92‑1 (MQ=255) aaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCt < 1:1160757‑M1/92‑1 (MQ=255) aaagcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGAAAAAACAAAATGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCt < 2:1957244‑M1/92‑1 (MQ=255) acatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTc > 2:1699922‑M2/42‑135 (MQ=255) acatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTc < 2:1318160‑M2/94‑1 (MQ=255) acatttacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTc < 2:561625‑M2/94‑1 (MQ=255) acatttacttcaaatatccagatttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTc < 1:556791‑M2/94‑1 (MQ=255) agcaggcgctctcccagctgagctaaggccccgttttaaaTTgaga > 1:149178‑M1/41‑46 (MQ=255) agcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTcc < 1:3251419‑M1/95‑1 (MQ=255) agcaggcgctctcccagctgagctaaggccccgttttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTcc < 1:3404247‑M1/95‑1 (MQ=255) tacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATa > 2:2551566‑M2/37‑135 (MQ=255) tacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATa < 1:3126648‑M2/99‑1 (MQ=255) tacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATa > 2:791298‑M2/37‑135 (MQ=255) tacttcaaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATa > 2:1892962‑M2/37‑135 (MQ=255) caaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAAc < 1:3828412‑M2/38‑1 (MQ=255) caaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATAtt > 1:712171‑M2/32‑93 (MQ=255) caaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGc > 1:2445335‑M2/32‑134 (MQ=255) caaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCt < 2:1576789‑M2/104‑1 (MQ=255) aaatatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATa < 2:2725937‑M2/99‑1 (MQ=255) tatccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCt < 1:419065‑M2/108‑1 (MQ=255) tccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTg < 2:2481586‑M2/110‑1 (MQ=255) tccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTg < 2:715447‑M2/110‑1 (MQ=255) tccagttttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTg < 1:2833438‑M2/110‑1 (MQ=255) ttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACg < 1:1793156‑M2/115‑1 (MQ=255) ttcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGa < 2:520198‑M2/116‑1 (MQ=255) tcaatgaacaaaagtgtTTGAGAGTAAACCTCTCa > 1:2980887‑M2/18‑35 (MQ=255) tcaatgaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACt < 2:1150170‑M2/118‑1 (MQ=255) gaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCAcc < 2:3622422‑M2/123‑1 (MQ=255) gaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCAcc < 1:818234‑M2/123‑1 (MQ=255) gaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCAcc < 1:965817‑M2/123‑1 (MQ=255) gaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCAcc < 2:331870‑M2/123‑1 (MQ=255) gaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCAcc < 2:2044020‑M2/123‑1 (MQ=255) gaacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCAcc < 1:1560781‑M2/123‑1 (MQ=255) aacaaaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACCTCAccc < 1:3722230‑M2/124‑1 (MQ=255) aaagtgtTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAat < 1:3776738‑M2/128‑1 (MQ=255) tttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCAccc > 2:2799629‑M1/7‑130 (MQ=255) ttaaaTTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGGAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAatc < 2:3092319‑M1/129‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAGAGTAAACCTCTCAAAACTGAACAAAGTAAAAACAAATTGTGTAGTCTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCACCTTCCGATACGGCTACCTTGTTACGACTTCACCCCAATCATCTAT > AssemblyC74_contig_39/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |