New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AssemblyC74_contig_62 = 3910 (0.000)437 (0.530) 85/248 1.6 100% intergenic (+213/–) rasttk_feature_annotation_tool=annotate_proteins_si milarity/– Mobile element protein/–
?AssemblyC74_contig_64 = 352 0 (0.000)intergenic (+1/–) rasttk_feature_annotation_tool=elepa@bvbrc/– hypothetical protein/–

Only 100 of 979 total aligned reads displayed.

TGATTGGAGTAGAAATCAATGGCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_64/218‑352
                                                                                                                                      |                                                                                                                                     
     ggAGTAGAAATCAATGGCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcat                                                                                                                                  <  2:2261383‑M2/135‑6 (MQ=255)
               tCAATGGCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagatta                                                                                                                        <  2:2061706‑M2/135‑16 (MQ=255)
               tCAATGGCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagatta                                                                                                                        <  2:2325108‑M2/135‑16 (MQ=255)
                cAATGGCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattac                                                                                                                       >  1:2960956‑M2/1‑119 (MQ=255)
                   tGGCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacg                                                                                                                    <  1:3452465‑M2/135‑20 (MQ=255)
                    ggCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacg                                                                                                                    <  2:79115‑M2/134‑20 (MQ=255)
                    ggCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggca                                                                                                                                   >  2:2710683‑M2/1‑115 (MQ=255)
                    ggCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacg                                                                                                                    <  1:3415105‑M2/134‑20 (MQ=255)
                     gCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgag                                                                                                                  >  1:2467066‑M2/1‑114 (MQ=255)
                         aGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagt                                                                                                              <  1:777133‑M2/135‑26 (MQ=255)
                                   aTCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaatt                                                                                                    <  1:1789663‑M2/135‑36 (MQ=255)
                                   aTCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaatt                                                                                                    <  1:932832‑M2/135‑36 (MQ=255)
                                    tCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaatta                                                                                                   >  2:1096697‑M2/1‑99 (MQ=255)
                                      gTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaat                                                                                                 >  1:1001932‑M2/1‑97 (MQ=255)
                                        tCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgc                                                                                               <  2:3824548‑M2/135‑41 (MQ=255)
                                        tCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgc                                                                                               <  2:2468648‑M2/135‑41 (MQ=255)
                                        tCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgc                                                                                               <  1:2600483‑M2/135‑41 (MQ=255)
                                        tCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgc                                                                                               <  1:2411088‑M2/135‑41 (MQ=255)
                                        tCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgc                                                                                               <  1:2523286‑M2/135‑41 (MQ=255)
                                        tCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgc                                                                                               <  2:2542834‑M2/135‑41 (MQ=255)
                                        tCCTAGTGAGGATCTGAAAAACGGAACGTTCCAATATTATGTGGGAAGTGGGTTAAAATAGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgc                                                                                               <  2:3130417‑M2/135‑41 (MQ=255)
                                               gAGGATCTGAAAAACGGTACGTTCCCATATTATGTGGGAAGTGGGTTAAAATTGACAGATCAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagt                                                                                          <  2:692014‑M2/133‑46 (MQ=255)
                                               gAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagt                                                                                          <  2:2625458‑M2/133‑46 (MQ=255)
                                               gAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagt                                                                                          <  1:1588371‑M2/133‑46 (MQ=255)
                                               gAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagt                                                                                          <  1:1320513‑M2/133‑46 (MQ=255)
                                               gAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagt                                                                                          <  1:3518223‑M2/133‑46 (MQ=255)
                                                atgatCTGAAAAACTGTTCGTTACAATATTATGTGGGAAGTGGGTTAATATTGACAGATAAAGTCGTAATAGTATTTTATACCGCAGagcatgccgagattacacgagcagctgttacaattaacgcaaagtaac                                                                                       >  2:1431134‑M2/3‑87 (MQ=255)
                                                 ggATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagt                                                                                          <  2:1626687‑M2/131‑46 (MQ=255)
                                                  gATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaact                                                                                      >  2:426072‑M2/1‑85 (MQ=255)
                                                  gATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaact                                                                                      >  1:3724315‑M2/1‑85 (MQ=255)
                                                  gATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAATGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaact                                                                                      >  2:3705304‑M2/1‑85 (MQ=255)
                                                   aTCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgag                                                                                                                  >  2:2409353‑M2/1‑84 (MQ=255)
                                                     cTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggtt                                                                                  <  1:427050‑M2/135‑54 (MQ=255)
                                                     cTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggtt                                                                                  <  1:2878626‑M2/135‑54 (MQ=255)
                                                     cTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgc                                                                                               >  2:1944849‑M2/1‑82 (MQ=255)
                                                     cTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttt                                                                                  <  1:1730388‑M2/135‑54 (MQ=255)
                                                     cTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaact                                                                                      >  1:1623943‑M2/1‑82 (MQ=255)
                                                      tGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttg                                                                                 >  2:1722881‑M2/1‑81 (MQ=255)
                                                                   gTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttat                                                                    >  2:3415105‑M2/1‑68 (MQ=255)
                                                                     tCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttatt                                                                   <  2:1783193‑M2/134‑69 (MQ=255)
                                                                      ccAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattg                                                                 >  1:509889‑M2/1‑65 (MQ=255)
                                                                               tgtgGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaatta                                                        >  1:1914879‑M2/1‑56 (MQ=255)
                                                                               tgtgGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaatta                                                        >  2:2768348‑M2/1‑56 (MQ=255)
                                                                               tgtgGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaatta                                                        >  1:2325108‑M2/1‑56 (MQ=255)
                                                                               tgtgGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaatta                                                        >  1:1165038‑M2/1‑56 (MQ=255)
                                                                                 tgGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagc                                                      >  1:1446611‑M2/1‑54 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaa                                                     <  2:3340757‑M2/135‑83 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaa                                                     <  2:504062‑M2/135‑83 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaa                                                     <  2:1224988‑M2/135‑83 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaa                                                     <  2:749602‑M2/135‑83 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaa                                                     <  1:1053616‑M2/135‑83 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaa                                                     <  1:2755811‑M2/135‑83 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaact                                                                                      <  1:3901839‑M2/102‑50 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaat                                                                                                 >  1:3796065‑M2/1‑53 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagc                                                      <  1:2007134‑M2/134‑82 (MQ=255)
                                                                                  gggAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttgg                                                                               >  1:3641158‑M2/1‑53 (MQ=255)
                                                                                       gTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatat                                                 >  1:2811389‑M2/1‑48 (MQ=255)
                                                                                       gTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatat                                                 >  2:3452465‑M2/1‑48 (MQ=255)
                                                                                       gTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcg                                                     <  2:1161851‑M2/130‑83 (MQ=255)
                                                                                         gggTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagc                                                      >  2:3278379‑M2/1‑46 (MQ=255)
                                                                                             tAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgat                                            <  2:946038‑M2/133‑92 (MQ=255)
                                                                                             tAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttggg                                                                               <  1:3356542‑M2/98‑57 (MQ=255)
                                                                                              aaaaTTGACAGATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaatta                                                        <  2:1038502‑M2/120‑80 (MQ=255)
                                                                                                     aCAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtca                                  >  2:2880999‑M2/1‑34 (MQ=255)
                                                                                                     aCAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtca                                  >  2:614971‑M2/1‑34 (MQ=255)
                                                                                                     aCAGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtca                                  >  1:3130417‑M2/1‑34 (MQ=255)
                                                                                                       aGATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaa                                 <  2:1377743‑M2/134‑103 (MQ=255)
                                                                                                        gATAAAGTCGAAATAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaact                                                                                      >  2:1317649‑M2/1‑31 (MQ=255)
                                                                                                        gATAAAGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaat                               <  1:212459‑M2/135‑105 (MQ=255)
                                                                                                           aaaGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatt                              >  2:3881299‑M2/1‑28 (MQ=255)
                                                                                                            aaGTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagc                                                      >  1:3846353‑M2/1‑27 (MQ=255)
                                                                                                              gTCGAAATAGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaact                                                                                      <  1:11078‑M2/74‑50 (MQ=255)
                                                                                                                  aaaTAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaata                     >  2:1566700‑M2/1‑21 (MQ=255)
                                                                                                                  aaaTAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaata                     >  1:1377781‑M2/1‑21 (MQ=255)
                                                                                                                  aaaTAGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaata                     >  1:1224988‑M2/1‑21 (MQ=255)
                                                                                                                      aGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactg                  <  2:2910512‑M2/134‑118 (MQ=255)
                                                                                                                      aGTATTGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtca                                  <  1:2252560‑M2/118‑102 (MQ=255)
                                                                                                                      aGTATTGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctcatttctatattcaaaa                 <  1:628437‑M2/135‑119 (MQ=255)
                                                                                                                          ttGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatttctatattcaaaatt               >  1:837319‑M2/1‑13 (MQ=255)
                                                                                                                          ttGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatttctatattcaaaatt               >  1:3240085‑M2/1‑13 (MQ=255)
                                                                                                                           tGTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatt            <  2:3000570‑M2/135‑124 (MQ=255)
                                                                                                                           tGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatttctatattcaaaattagt            >  2:1490571‑M2/1‑12 (MQ=255)
                                                                                                                           tGTATACCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatttctatattcaaaattagt            <  2:3630511‑M2/135‑124 (MQ=255)
                                                                                                                            gTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacattt           >  2:863403‑M2/1‑11 (MQ=255)
                                                                                                                            gTATACCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacattt           >  1:1510007‑M2/1‑11 (MQ=255)
                                                                                                                             tataCCGCAGagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatttctatattcaaaattagtag          >  2:3518223‑M2/1‑10 (MQ=255)
                                                                                                                               taCCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatttggt        >  1:1851655‑M2/1‑8 (MQ=255)
                                                                                                                                aCCGCTGggcatgtctagattacacgagcagttgttgcaattaatgctaaggaactggttgtgttaaacctgaattgacgtagatttaaatatttgatctcttcgtcaattcatattaataatggaaatttggtt       >  2:3054920‑M2/1‑7 (MQ=255)
                                                                                                                                aCCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatttggtt       <  2:1879928‑M2/135‑129 (MQ=255)
                                                                                                                                aCCGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatttggtt       >  1:3300834‑M2/1‑7 (MQ=255)
                                                                                                                                aCCGCAGggcatgtcgagattacacgagcagttgttcc                                                                                                        <  1:3048998‑M2/38‑32 (MQ=255)
                                                                                                                                 ccGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaacgtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattactactggacatttggtta      >  1:692014‑M2/1‑6 (MQ=255)
                                                                                                                                  cGCAGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatttggtt       <  2:3777761‑M2/133‑129 (MQ=255)
                                                                                                                                     agagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatttctatattcaaaattagtagcaactata  <  2:2825065‑M2/135‑134 (MQ=255)
                                                                                                                                     agagcatgccgagattacacgagcagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtcgctaatttctatattcaaaattagtagcaactata  <  1:2667082‑M2/135‑134 (MQ=255)
                                                                                                                                     agagcatgccgagattacacgagaagctgttccaattaacgcaaagtaactgttttggatataccttattaacatgaattagcggcatattaagtatgtctctaatttctatattcaaaattagtagaaactata  <  2:2149876‑M2/135‑134 (MQ=255)
                                                                                                                                     aGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatttggttagtc   <  1:270215‑M2/134‑133 (MQ=255)
                                                                                                                                     aGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatttggtt       <  2:551353‑M2/130‑129 (MQ=255)
                                                                                                                                     aGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtcaattcatattaatactggacatttggtt       >  1:551405‑M2/1‑2 (MQ=255)
                                                                                                                                     aGggcatgtcgagattacacgagcagttgttccaattaatgcaaagtaactggttgggttaaacctgaattgacgaagatgtaaatatttgatctcttcgtca                                  <  1:2916434‑M2/103‑102 (MQ=255)
                                                                                                                                      |                                                                                                                                     
TGATTGGAGTAGAAATCAATGGCCAAGTACAAGCCATCGTTCCTAGTGAGGATCTGAAAAACGGTACGTTCCAATATTATGTGGGAAGTGGGTTAAAATTGACAGATAAAGTCGAAATAGTATTGTATACCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AssemblyC74_contig_64/218‑352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.