| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_20 | = 39141 | 0 (0.000) | 84 (0.750) | 30/154 | 0.9 | 65.6% | intergenic (+93/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | L‑lactate dehydrogenase (EC 1.1.1.27)/– |
| ? | TrimmedAssembly_T66_contig_9 | = 79 | 88 (0.700) | intergenic (–/+180) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 144 total aligned reads displayed.
GTTCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_20/38956‑39141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggctgtgacataagtctctagaaacaaagcaggtctggaaaaatcttcggATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑ < TrimmedAssembly_T66_contig_9/79‑1 GTTCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGA > 2:15229/1‑136 TCAATTGGATCTCACGGACGAAGAATTGTAATAATTACAAGTTTCAGCTGATTTTATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGA < 2:1468879/134‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 2:1829035/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 2:1488762/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 1:1629968/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 2:2413988/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 2:1422143/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 1:598935/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 1:1217059/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 2:1937905/136‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAG < 1:15229/135‑1 AATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAG > 2:1269954/1‑133 AATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAG > 2:1269963/1‑133 TGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTG < 1:1269963/136‑1 TGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTG < 1:1291783/136‑1 TGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTG < 1:1269943/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:2025138/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:490948/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 2:2339755/136‑1 ACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGA < 2:79018/117‑1 ACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCG > 1:2343681/1‑116 ACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCG < 2:2343681/116‑1 CGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCT < 2:2306795/135‑1 GAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAG < 2:1070114/136‑1 ATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACA < 1:2239249/136‑1 ATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACA < 1:1532786/136‑1 AAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGC > 1:178418/1‑136 AAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGC > 1:178378/1‑136 TGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 1:1581024/135‑1 TGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 2:1018183/135‑1 TGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 1:1766119/135‑1 ATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTT > 1:68174/1‑136 ATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTT > 2:328091/1‑136 ATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTT > 2:1927339/1‑136 ATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTT > 1:1124351/1‑135 AAGACCAAGTACGCTGACAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCtg < 2:1514064/136‑3 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAATGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 1:1462340/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 1:220735/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 2:2059466/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 1:2154356/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 1:367491/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 1:1263407/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 2:38386/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTG > 2:256462/1‑78 CAAGTACGCTGAAAGACAGACCGACTAATCAGCACTCAAACGTCAACTAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAAAAAAGCAGGTCTGGAAAAATCTACGGATGTATCCAGACCTG > 1:2154398/1‑136 AAGTACTCTTAAAGTCAGACCGAATCATCAGCACTCAAACGTCCACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGC < 1:952028/136‑1 ACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGACCTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACTATGCAGGTCTGGAAAAATCTTCGGATGTTTCCAGACCTGCTTTT > 1:31226/1‑136 ACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTT > 2:2184378/1‑136 AAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAATGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATA > 2:948316/1‑136 AAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATA > 2:1729129/1‑136 GTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATA > 1:42435/1‑136 CAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAATAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATA < 1:1959293/134‑1 CCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT > 2:1025524/1‑136 CTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAA > 1:867402/1‑136 CTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAA < 1:1625981/135‑1 AATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAA > 2:1670721/1‑136 CAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga < 1:1025522/136‑3 CAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga < 1:1025524/136‑3 gCAAACGACAACGAACTAACACGTTCAACACGGCGAGGCTGTGACATAAGTCTCTAGAAAAAAAGCATGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:397341/135‑1 TCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:68174/136‑1 TCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG > 1:1244415/1‑136 TCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1670721/136‑1 TCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG > 2:1123710/1‑136 CAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG > 1:2415270/1‑136 CAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG > 1:1736427/1‑136 AAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:1263407/136‑1 AAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:1244415/136‑1 AAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:876452/136‑1 AAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:1479652/136‑1 AAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:2175952/136‑1 AACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTC > 1:1857438/1‑136 CGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:87926/1‑136 CGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 2:1363241/1‑136 CGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:2360935/1‑136 CAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCAC < 2:2374888/135‑1 cCGAACTAACACTTTCAAAACGGCGAGGCTGTGACATACGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:966606/135‑1 aaGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCGAGAAACAAAGCAGGTCTGGAAAAATCGTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAA‑AAAAAAAAGAGCATCGGTCGCAACCG > 1:1653853/3‑136 ACGAACTAACACTTTCAAAAAGGCTAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:41119/136‑1 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 1:198489/1‑136 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:2286378/136‑1 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG < 2:1245069/127‑1 AACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT > 1:795706/1‑135 AACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT > 1:1460728/1‑135 AACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT > 1:1327073/1‑135 CTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT < 2:42435/136‑1 CTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT < 1:2435074/136‑1 CTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT < 2:198489/136‑1 CACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAATGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTAC > 2:746938/1‑136 CACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTAC > 2:2375205/1‑136 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 2:1117968/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 2:78174/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 1:820555/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 1:1655637/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 1:319747/58‑1 AGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 2:168106/136‑3 CATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGC < 2:209648/58‑1 CATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGC > 1:209648/1‑58 AAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACT < 2:169573/95‑1 AAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACT > 1:169573/1‑95 AAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAA < 2:18309/67‑1 GTTCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_20/38956‑39141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggctgtgacataagtctctagaaacaaagcaggtctggaaaaatcttcggATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑ < TrimmedAssembly_T66_contig_9/79‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |