| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_28 | = 3183 | 0 (0.000) | 236 (0.360) +TGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCG |
63/176 | 1.8 | 100% | intergenic (‑135/–) | rasttk_feature_creation_tool=RNA_reps_LSU_rRNA/– | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/– |
| ? | TrimmedAssembly_T66_contig_32 | = 1640 | 0 (0.000) | intergenic (+24/–) | rasttk_feature_creation_tool=RNA_reps_SSU_rRNA/– | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/– | |||||
Only 100 of 447 total aligned reads displayed.
TACCTAACGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_28/3052‑3183‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCCTAAAAGGTTACCCCACCG < TrimmedAssembly_T66_contig_32/1640‑1507 ||||||||||||||||||||||||||||||||||||||||| TACCTAATGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAG > 2:1373859/1‑136 AACGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAATTATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTA > 1:2264143/1‑136 tGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAA > 1:2052004/2‑136 TAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGggata > 2:2088702/1‑128 TAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATC > 2:2366251/1‑135 TAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATC > 1:320080/1‑135 TAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATC < 1:1372144/135‑1 TAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATAGTTGAGATTCTCTAGTTTTCAATGAACAAGTTTTGAGAGTTAAATC > 2:1405866/1‑135 AAATGCGATTAATGAGTATAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTATCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTC < 1:2088702/136‑1 GCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAA > 1:256222/1‑136 GCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAA > 2:519260/1‑136 GCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAA > 2:652770/1‑136 CGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAA > 1:104492/1‑136 AATGAGTTTAGCGATAATTGAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA > 2:1439567/1‑136 AATGAGTTTAGCGATAATTAAACTTCAATAAAAATCTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA > 2:1153287/1‑136 AATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTTATATTATCTAGTTTTAAAAGAACAATTTTTGAGAGTTAAATCTCTCAAAACTAA > 1:969243/1‑136 AATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA < 1:1715048/136‑1 AATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAA > 2:1612998/1‑136 TTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGT < 1:2329024/136‑1 TAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTT < 2:320080/136‑1 AGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTT > 1:2419640/1‑135 AGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTT > 2:1958602/1‑135 AGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTT > 2:1592989/1‑135 CGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCG > 1:174825/1‑136 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACACAGTTTCGA < 1:710290/136‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 1:2205278/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 1:168585/134‑1 GATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 2:1190759/134‑1 GATAATTAAACTTCAATAAAAAACACAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATAATTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 1:590553/134‑1 GATAATAAAACTTCAATAAAAAACTCAAACACCGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC < 1:642553/134‑1 TAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGAC > 2:1799021/1‑135 AAACTTCAATAAAAATCTCAAAAATCGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 2:1865075/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAATTTTTGAGAGTTAAATCTCTCAAAACTAAACAAACTTTCGACGCGTGT > 2:731529/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 2:1283962/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 1:1612889/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 1:134408/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGT > 1:1285108/1‑136 AAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACG < 1:1138060/131‑1 CTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTA < 2:391239/136‑1 CTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTA < 2:974180/136‑1 TCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGG < 2:279160/136‑1 TAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTT > 2:2310279/1‑135 ACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAAT < 1:984579/136‑1 TCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTC > 2:1637429/1‑110 CAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATT < 2:2273069/136‑1 CAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATT < 1:1955005/136‑1 CAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATAATATCTAGATTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATT < 1:1400597/136‑1 AACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTA < 2:433973/136‑1 AACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTA < 1:148468/136‑1 AACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTA < 1:2366251/136‑1 AACGCGGTGTTCTCGGGTTCATTATGAAAAAATATATTTGATATTATATAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTA < 2:11168/136‑1 GTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGA < 1:821937/135‑1 ctcccTTTCAATATGAAAAAAGATATAAGATAAGATCTAGTTTACAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCATAGAAAGGAGGTG < 2:2410391/131‑1 GTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTA > 2:2129337/1‑121 ATTATGAAAAAATATATTTGAGATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCC > 2:2177705/1‑135 TTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGC < 2:256222/136‑1 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA < 2:1655691/136‑1 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCA > 2:2074574/1‑136 TATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGA > 1:1423700/1‑84 AAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTC < 1:2017967/136‑1 AAAAATATATATGAAATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGGGTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTC < 2:2448432/136‑1 AAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCT > 2:1322164/1‑135 TATATTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTA < 2:1697434/136‑1 TTTGATATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGC < 1:1636581/136‑1 ATTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTT < 1:1110621/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 2:1738100/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 2:2227684/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 2:566605/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 1:879334/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 2:845175/136‑1 TTATCTAGTTTTCAAAGAACAAGTTTTGAGAGATAAATCTCACAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTG < 1:1226170/136‑1 ATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTT > 1:146463/1‑136 ATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTC < 2:470433/118‑1 ATCTAGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGT > 1:1879847/1‑66 AGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGA < 1:929808/136‑1 AGTTTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACG > 2:1213749/1‑135 TTTCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCATAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACT < 2:1551186/135‑1 TCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAAGATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTC > 1:29924/1‑135 TCAAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTT < 1:1782340/67‑1 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACC < 1:2127610/136‑1 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACC < 1:40591/136‑1 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACC < 2:2051936/136‑1 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACC < 1:552019/136‑1 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCAC > 2:2331612/1‑135 AAAGAACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCAC > 1:1813563/1‑135 ACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTGCGTAATATTCCTTAGAATGGAGGTGATCCAGCCGAAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAAT < 1:470701/136‑1 ACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAAT < 1:2310279/136‑1 ACAAGTTTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTA < 2:922150/134‑1 TTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCT < 1:356570/135‑1 TTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCT < 2:1050892/135‑1 TTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCT < 1:1205370/135‑1 TTTGAGAGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCT < 2:95853/135‑1 AGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCA > 1:1186971/1‑135 AGTTAAATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAAT < 2:1907144/124‑1 AATCTCTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAG > 1:510085/1‑136 CTCAAAACTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCAGC < 1:1923721/136‑1 AAAACTAAACAAAGGTGCGACGCGTGTGTAGGTTTCCGTAATATTCCTTCGAAAGGAGGTGATCCAGCCGCCGGTGCTCCTACGGCTACCTTGTTACGACGTCACCCTAATCATCTGTCCCACCTTAGGCAGCTGG > 2:1484780/1‑136 CTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCC < 2:305406/136‑1 CTAAACAAAGTTTCGACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCC < 1:2074574/136‑1 GACGCGTGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCT < 1:957695/98‑1 ||||||||||||||||||||||||||||||||||||||||| TACCTAACGGTAAATGCGATTAATGAGTTTAGCGATAATTAAACTTCAATAAAAAACTCAAAAAACGCGGTGTTCTCGGTTTCATTATGAAAAAATATATTTGATATTATCTAGTTTTCAAAGAACAAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_28/3052‑3183‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGTAGGTTTCCGTAATATTCCTTAGAAAGGAGGTGATCCAGCCGCAGGTTCTCCTACGGCTACCTTGTTACGACTTCACCCTAATCATCTGTCCCACCTTAGGCGGCTGGTTCCTAAAAGGTTACCCCACCG < TrimmedAssembly_T66_contig_32/1640‑1507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |