| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | = 88614 | 104 (0.700) | 246 (1.320) | 70/256 | 0.1 | 82.7% | coding (223/300 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | 2 = | 0 (0.000) | coding (2/474 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | CRISPR‑associated protein Cas1 | |||||
Only 100 of 249 total aligned reads displayed.
TGTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88479‑88614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGA > TrimmedAssembly_T66_contig_3/2‑133 tgtattTTCATTCATTGGGAATGCCTCCTGTGATGTTTTCTGTGTTTACTAAATATCATAAGGGAAGGCATTCCCTATTTATATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGG < 2:28281/130‑1 GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGG > 1:66368/1‑136 GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGG < 1:1303117/136‑1 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAA > 2:1199450/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAA > 2:2196238/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAA > 1:832112/1‑136 CTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATT < 2:1063999/136‑1 CTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATT > 2:1588153/1‑136 CTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATT > 1:1223061/1‑136 CCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTT > 1:1728178/1‑136 GTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCA > 1:1011871/1‑136 TGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCAT > 2:1241641/1‑136 ATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTG > 1:2039018/1‑136 TTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTA > 1:1356256/1‑136 TTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTA > 1:615395/1‑136 TTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTAT < 2:1967275/136‑1 TTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTAT < 2:329260/136‑1 TCTGTGGTTACTAAATATTATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTT > 1:2206481/1‑136 TCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTT > 1:284833/1‑136 CTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTG < 2:1133436/136‑1 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGG > 2:1493061/1‑136 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGG > 1:1896162/1‑136 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 1:1587931/136‑1 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 1:1478340/136‑1 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 2:1732702/136‑1 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 2:2123998/136‑1 GTGGTTACTAAATATCATAAGGGAAGGCAGTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 1:77845/136‑1 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTG > 2:1515162/1‑135 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTG > 1:1142480/1‑135 TTACTAAATATCATAATGGAAGGCAAGCCCTATTTCTATACAATTCAGAAATCTTTTATGCATATACACAAGATATTTTACGCTCTACTGGAGGAAGTTGTGGCTAATAAATATTTTTCATTGTTATTTTGTGCac > 2:77073/1‑134 TTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCC > 1:933482/1‑136 CTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAATTATTTTTCATTGTTATTTGGTGCCCAGT > 1:955385/1‑136 AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGT > 2:535423/1‑134 AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGT > 1:543410/1‑134 TCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCG < 2:411142/136‑1 AGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAG > 1:1160467/1‑136 GGGAAGGCCTTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGA > 1:2134610/1‑136 GGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGA > 1:1000244/1‑136 AAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTT > 1:99520/1‑136 AAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTT > 2:2213407/1‑136 AGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTT < 2:2011087/136‑1 AGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTT < 2:260675/136‑1 CTATTTCTATACAATTCAGAAATCTTTTATGC‑ATTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:1313855/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 2:2099498/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 2:610520/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA > 1:1686411/1‑136 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:1210977/136‑1 TTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTCTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACG < 1:420611/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCT < 1:1515162/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCT < 2:1886465/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCT < 1:141594/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAAC > 2:954304/1‑133 ATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGC < 2:739121/136‑1 AATTCATAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:463336/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTCCCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:89948/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:2136553/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:1255288/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:1205990/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 2:437463/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:933482/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:1686411/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 1:1493061/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:2442098/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:1933531/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:258822/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:1642398/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACG < 2:1813487/128‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACG > 1:1813487/1‑128 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT > 2:1310419/1‑91 AGAAATCTTTTATGCCTTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTAATTGTTATTTGGTGCCCAGTTCTACCGTCGAGGGTTTAGCCCAATTAACGCTGCCCTCTACT > 2:653060/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 1:1035071/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 1:49214/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 2:1948598/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 2:2005031/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 1:549466/131‑1 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:2060928/120‑1 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:2142630/120‑1 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA > 2:2060928/1‑120 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGATCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACG < 2:1217942/135‑1 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT < 2:1768946/136‑1 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT > 2:1618109/1‑136 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT < 2:1356256/136‑1 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT > 2:2266869/1‑136 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT < 1:2383561/136‑1 TTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATAC < 2:2332090/136‑1 TTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACG < 2:549161/136‑1 TTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACG < 1:603515/136‑1 taTGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCC < 2:1056602/134‑1 taTGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT < 2:1447381/129‑1 TGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGT < 2:114460/136‑1 TGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGT < 1:2266869/136‑1 TGCATTTACACAAGATATTTTACACTCTCCGGGAGGCAATTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGT < 1:1601570/136‑1 gcaTTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTG < 1:232345/133‑1 ACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATC < 2:1398542/136‑1 AGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCAT < 1:2005031/136‑1 ATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTG > 1:68247/1‑136 ATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTG > 2:1185054/1‑136 ATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACG < 2:1657127/116‑1 ATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATAC < 1:1835800/115‑1 CTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGA > 1:888039/1‑136 TGTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88479‑88614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGA > TrimmedAssembly_T66_contig_3/2‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |