| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_19 | 1 = | 0 (0.000) | 241 (0.810) | 86/258 | 0.1 | 100% | intergenic (–/+149) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_35 | = 1096 | 0 (0.000) | intergenic (+10/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– | |||||
Only 100 of 241 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACGAGTAAATT > TrimmedAssembly_T66_contig_19/1‑134 | attatacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaa > 1:237115‑M1/130‑136 (MQ=255) tacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaaaaa < 2:1506906‑M1/10‑1 (MQ=255) tacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccacatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaaaaa < 1:1245151‑M1/10‑1 (MQ=255) acagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGc > 2:1097521‑M1/125‑136 (MQ=255) acagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGc > 2:62952‑M1/125‑136 (MQ=255) acagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGc > 2:1597971‑M1/125‑136 (MQ=255) acagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGc > 1:1936477‑M1/125‑136 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgtaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCa < 2:915143‑M1/17‑1 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCg > 1:2434720‑M1/120‑133 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCg > 2:475787‑M1/120‑133 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTc > 1:65578‑M1/120‑135 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCa > 1:412794‑M1/120‑136 (MQ=255) aggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATg < 2:112513‑M1/19‑1 (MQ=255) cgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTa > 2:291698‑M1/114‑136 (MQ=255) gttgaacactgccaaattcagttacatcaacgtcctcgcaaagtgttaaactatgaaaacccatatgaagtattttttgacaaacagttgctcttagtttgacaattcgcccGTCTATAAAAGCCGTGATGGGTAt > 2:784297‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTTTAAAAAAGCCGTCATGGGTAt > 1:1302771‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATggg < 2:1985660‑M1/21‑1 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 2:1802469‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 1:2428397‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt < 1:2296085‑M1/24‑1 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 1:1166044‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt < 1:1098944‑M1/24‑1 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 1:785266‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccaaatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt < 2:1224301‑M1/24‑1 (MQ=255) tgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGc < 2:2122689‑M1/26‑1 (MQ=255) tgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGc > 1:2446745‑M1/111‑136 (MQ=255) tgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGc > 2:1305618‑M1/111‑136 (MQ=255) acactgccaaaagcatttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAATAAAGCCGTCATGGGTATGCaa > 1:1622560‑M1/108‑135 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 1:1696081‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 2:2073448‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 2:367768‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 2:1278983‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGACTAAAAAAGCCGTCATGGGTATGCaa < 1:2288697‑M1/28‑1 (MQ=255) gccaaaagcagttaaatcaacgtcctcgccaagtgataaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCca > 2:2091658‑M1/103‑136 (MQ=255) gccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATcccc < 1:754799‑M1/33‑1 (MQ=255) gccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCca > 1:196798‑M1/103‑136 (MQ=255) gccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCca > 2:1098944‑M1/103‑136 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCACTCCCcaca < 2:1950552‑M1/36‑1 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcaca < 2:2012942‑M1/36‑1 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcaca < 1:1454269‑M1/36‑1 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcaca < 1:988731‑M1/36‑1 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcac < 2:2253007‑M1/35‑1 (MQ=255) aaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc > 1:1506906‑M1/99‑136 (MQ=255) aaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc > 1:1429586‑M1/99‑136 (MQ=255) aaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc < 2:811619‑M1/38‑1 (MQ=255) aagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACg > 2:396956‑M1/98‑136 (MQ=255) aagcagttaaatcaacgtcctcgcaaagtgttaaactaagaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACg > 2:1071919‑M1/98‑136 (MQ=255) taaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTg > 1:1008398‑M1/91‑134 (MQ=255) taaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTg > 1:1750304‑M1/91‑134 (MQ=255) taaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCt < 1:390555‑M1/46‑1 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATcccc > 1:1552843‑M1/89‑121 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCctgcgag < 1:2205491‑M1/48‑4 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtat < 1:570630‑M1/48‑1 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtat < 2:2439927‑M1/48‑1 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtat < 1:1421188‑M1/48‑1 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtat < 1:217932‑M1/48‑1 (MQ=255) gtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTg > 2:266877‑M1/82‑136 (MQ=255) cctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACACCGGCCTGCTATTATCTTGTa < 1:1720897‑M1/57‑1 (MQ=255) aaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAg > 1:183681‑M1/66‑136 (MQ=255) aactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCg < 1:818042‑M1/14‑1 (MQ=255) aactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGc < 2:241391‑M1/72‑1 (MQ=255) actatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCg > 1:1000776‑M1/64‑136 (MQ=255) actatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCg > 1:956456‑M1/64‑136 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCg < 2:1879208‑M1/14‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCg > 1:1879208‑M1/57‑70 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 1:1089583‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 2:2288767‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 2:771430‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaa > 1:2073448‑M1/57‑135 (MQ=255) aaccccatatgaagtattttatgacaaacccttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGAATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGACAAAACAAGCGGTAcaac < 1:1642534‑M1/80‑1 (MQ=255) ccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCa < 1:1472383‑M1/17‑1 (MQ=255) ccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCa > 2:1472383‑M1/55‑71 (MQ=255) cccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACCAGCGGTTCaacaac > 2:1170580‑M1/54‑136 (MQ=255) cccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCaacaac > 1:1020506‑M1/54‑136 (MQ=255) atgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCt > 2:727002‑M1/49‑136 (MQ=255) atgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATAATCTTTTAATAGCCAAAACAATCGGTTCAACAActc < 1:2235610‑M1/85‑2 (MQ=255) gaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGt < 1:452883‑M1/90‑1 (MQ=255) gaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGt < 2:1573608‑M1/90‑1 (MQ=255) attttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTc > 2:1640391‑M1/42‑134 (MQ=255) attttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCg > 1:2000514‑M1/42‑135 (MQ=255) attttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGa < 2:580696‑M1/95‑1 (MQ=255) ttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGa > 1:771341‑M1/37‑136 (MQ=255) ttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGa > 2:517101‑M1/37‑136 (MQ=255) caaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCa > 1:791904‑M1/33‑136 (MQ=255) aaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCaa > 1:1060916‑M1/32‑136 (MQ=255) accgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACt > 2:1435800‑M1/30‑136 (MQ=255) accgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACt > 2:13206‑M1/30‑136 (MQ=255) ttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAAt > 2:862653‑M1/20‑136 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATcccc < 1:1537535‑M1/33‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAAc < 2:1183578‑M1/68‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAAc > 1:1183578‑M1/15‑82 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 1:1804205‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 2:472194‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 2:2326491‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc > 2:1547090‑M1/15‑135 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 1:306620‑M1/121‑1 (MQ=255) caattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACg > 1:1114568‑M1/11‑136 (MQ=255) aattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACGa < 1:473043‑M1/127‑1 (MQ=255) gcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCaacaac > 2:709191‑M1/5‑87 (MQ=255) gcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCaacaac < 1:709191‑M1/83‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACGAGTAAATT > TrimmedAssembly_T66_contig_19/1‑134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |