| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_2 | = 25 | 26 (0.110) | 137 (0.430) +GAATTTTGGTTTCTCGTCCCATTTGCTTACGCCTTTGATTTTTAAAGTTGGTCCCTACCGTGACCAA |
21/124 | 0.5 | 95.7% | coding (24/180 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_42 | 1 = | 0 (0.000) | coding (318/318 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Transposase, IS4 family | |||||
Only 100 of 658 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCG > TrimmedAssembly_T66_contig_2/1‑160 | gattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCaa < 1:2015321‑M1/26‑1 (MQ=255) tcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCACAATTc > 1:2146876‑M1/106‑136 (MQ=255) gtttcgacaaggtcaccaaggacgccggaatcgtaatcctggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTGTCTCg < 2:380709‑M1/40‑1 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:902612‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:71985‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:890304‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:1247600‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:2084216‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:1604748‑M1/94‑135 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 1:1093106‑M1/93‑136 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAttt < 1:2398676‑M1/48‑1 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAtt > 1:1547576‑M1/89‑135 (MQ=255) aaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTg > 2:1095072‑M1/88‑136 (MQ=255) tcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCtt > 2:2286533‑M1/84‑135 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:602977‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:1639883‑M1/54‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:2137583‑M1/83‑136 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:1245943‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:715237‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:1911032‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:1373080‑M1/54‑1 (MQ=255) caaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACa > 2:1616337‑M1/80‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:2227343‑M1/79‑136 (MQ=255) aggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACaga < 1:2113417‑M1/59‑1 (MQ=255) gccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa < 1:1934431‑M1/64‑1 (MQ=255) gccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa < 1:180347‑M1/64‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:545693‑M1/72‑125 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:790878‑M1/54‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 2:1541445‑M1/65‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaattggtcacggtaggggccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTGCCATTTGCTTATACAGAGGCTAGTTa < 1:388184‑M1/68‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:2452014‑M1/69‑126 (MQ=255) gaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag < 1:2452014‑M1/58‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAACCCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGt < 2:679243‑M1/66‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTGCCATTTGCTTATACAGAGGCTAGTTa < 1:757334‑M1/68‑1 (MQ=255) atcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTGATg < 2:947484‑M1/70‑1 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 1:336227‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg < 2:1762395‑M1/70‑1 (MQ=255) cgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc > 2:1814134‑M1/65‑136 (MQ=255) cgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc > 1:1762395‑M1/65‑136 (MQ=255) atactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg > 2:2325833‑M1/61‑136 (MQ=255) tactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc < 2:630552‑M1/42‑1 (MQ=255) actggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGcc > 1:303339‑M1/59‑136 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcgtctt < 1:551526‑M1/85‑6 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcctttt < 1:2326052‑M1/85‑6 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcctttt < 1:1134304‑M1/85‑6 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcctttt < 1:875307‑M1/85‑6 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTAtt < 1:1830110‑M1/85‑1 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTAtt < 1:1267911‑M1/85‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcatttt < 2:1384890‑M1/85‑6 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcatttt < 1:469285‑M1/85‑6 (MQ=255) taaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcacagcctcgtctta > 2:1486977‑M1/51‑130 (MQ=255) cattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAAACAAAATACGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCtccttttttgaa > 2:2375418‑M1/47‑133 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg < 1:2273667‑M1/70‑1 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca < 1:739012‑M1/95‑1 (MQ=255) aattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGAtcatca < 2:2193268‑M1/98‑1 (MQ=255) acggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAtt < 2:2048232‑M1/47‑1 (MQ=255) acggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:1959602‑M1/54‑1 (MQ=255) acggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:1959602‑M1/31‑84 (MQ=255) ggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGGAATGTCACAGCCTCTTATTTTTTGGATCATCATTtatttata < 2:1002638‑M1/108‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTGTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 2:322324‑M1/120‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 1:202863‑M1/120‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAGTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 2:440499‑M1/120‑1 (MQ=255) taaaaatcaaagaCGTAAGCTAATGGGACGAGAAACCAAAATTCGGGGTCTCGTCCCAGTTGCGTAGACAGAGGCTAGTTATGTCACAGCCTCTTATGTGTTGGATCATCATTTATTTATATTTATCAAAgtaaag < 2:1271236‑M1/123‑3 (MQ=255) taaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc < 1:1210751‑M1/42‑1 (MQ=255) taaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc < 2:2140943‑M1/42‑1 (MQ=255) atcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc < 1:1493358‑M1/42‑1 (MQ=255) gTAAGCAACTGGGACGAGAAAACAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTaa < 1:917731/136‑1 (MQ=255) ataAGCAAATGGGACGAGAACCCgaattttggtttctcgtcccatttgcttacgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtg < 1:1431547‑M1/135‑114 (MQ=255) ataAGCAAATGGGACGAGAACCCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtg < 2:1053616‑M1/135‑114 (MQ=255) ataAGCAAATGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtg > 1:2079255‑M1/2‑23 (MQ=255) ataAGCAAATGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgtctttgatttttaaagttggtccctaccgtgaccaatttcataatg > 1:798015‑M1/2‑23 (MQ=255) ataAGCAAATGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtg > 2:1166042‑M1/2‑23 (MQ=255) ataAGCAAATGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacg > 1:541112‑M1/2‑23 (MQ=255) aaGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatg < 2:1426967‑M1/135‑57 (MQ=255) aaaTGGGACGAGAACCCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttg < 2:1687904‑M1/136‑120 (MQ=255) aaaTGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttg < 1:1164366‑M1/136‑120 (MQ=255) aaTGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttg > 2:2129769‑M1/1‑16 (MQ=255) aaTGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttg > 1:2242278‑M1/1‑16 (MQ=255) aaTGGGACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccgg > 1:1578706‑M1/1‑16 (MQ=255) aaTGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctg < 2:1118766‑M1/136‑63 (MQ=255) gggACGAGAAACCggattttggtttctcgtcccatttgcttacgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcga > 1:961538‑M1/1‑13 (MQ=255) gggACGAGAAACCgaattttggtttctggtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcctaatgtttaacgccagtattacgattccggcttcattggtgaccttgtcga > 2:808752‑M1/1‑13 (MQ=255) gggACGAGAAACCgaattttggtttctcgtcccatttgcttacgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcga > 2:53191‑M1/1‑13 (MQ=255) gggACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcga > 2:2430898‑M1/1‑13 (MQ=255) gggACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcga < 1:1736010‑M1/136‑124 (MQ=255) gggACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcga > 1:635069‑M1/1‑13 (MQ=255) gggACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcga > 1:1037101‑M1/1‑13 (MQ=255) gggACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggt > 1:1882957‑M1/1‑13 (MQ=255) ggACGAGAAACCgaattttggtttctcgtcccatttgcttacgccgttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgcccgtattacgattccggcttccttggtgaccttgtcgaa > 1:1001954‑M1/1‑12 (MQ=255) ggACGAGAAACCAAAATTCGGTTTCGCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTa > 1:2359776/1‑136 (MQ=255) gACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcgaa > 2:1881722‑M1/1‑11 (MQ=255) gACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcgaa > 1:2199199‑M1/1‑11 (MQ=255) gACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttg < 1:1288192‑M1/130‑120 (MQ=255) gACGAGAAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttg > 2:1288192‑M1/1‑11 (MQ=255) gagaAACCACAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACATCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAatt < 2:1347907/136‑1 (MQ=255) gagaAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtc < 2:565317‑M1/136‑71 (MQ=255) gaAACCgaattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcgaaacctc > 2:86345‑M1/1‑6 (MQ=255) gaAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgt < 1:2049859‑M1/133‑70 (MQ=255) aaCCgcattttggtttctcgtcccatttgcttacgcctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcgaaacctcg < 2:1211638‑M1/134‑131 (MQ=255) cAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCg < 2:752120/136‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCG > TrimmedAssembly_T66_contig_2/1‑160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |