| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_31 | 1 = | 0 (0.000) | 156 (0.560) | 56/258 | 0.4 | 100% | intergenic (–/+71) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_34 | 1 = | 0 (0.000) | intergenic (–/‑119) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 157 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTCCCCCG > TrimmedAssembly_T66_contig_31/1‑135 | aattcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaattcgaggctgtt < 1:344513‑M1/5‑4 (MQ=255)aattcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCtttt < 2:1092636‑M1/5‑1 (MQ=255)aattcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCtttt < 1:8713‑M1/5‑1 (MQ=255) tcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAAt < 2:1261427‑M1/8‑1 (MQ=255) tcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAAt < 1:1780255‑M1/8‑1 (MQ=255) catgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTcc > 1:2092315‑M1/123‑136 (MQ=255) catgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTc > 2:1017412‑M1/123‑135 (MQ=255) tacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAg > 1:1837370‑M1/115‑135 (MQ=255) cctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTg > 2:2094158‑M1/113‑136 (MQ=255) tgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCttt < 2:387170‑M1/33‑1 (MQ=255) tgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCttt < 2:309782‑M1/33‑1 (MQ=255) ttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCtttttt > 1:2399452‑M1/101‑136 (MQ=255) ggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCa < 1:2347401‑M1/40‑1 (MQ=255) ggtgaataaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCa < 2:480646‑M1/40‑1 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGt > 1:553983‑M1/85‑135 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGt > 2:2112775‑M1/85‑135 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGt > 1:1113534‑M1/85‑135 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGt > 1:1751349‑M1/85‑135 (MQ=255) tcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAttt > 1:6701‑M1/80‑135 (MQ=255) tcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAttt > 2:849407‑M1/80‑135 (MQ=255) tcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAttt > 2:849266‑M1/80‑135 (MQ=255) tcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAttt < 2:369870‑M1/56‑1 (MQ=255) cttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGc > 1:438852‑M1/79‑136 (MQ=255) ttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATttgat < 2:2020093‑M1/59‑3 (MQ=255) ttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCt < 2:504068‑M1/59‑1 (MQ=255) ttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCt < 2:223531‑M1/59‑1 (MQ=255) atggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaa < 2:1482447‑M1/62‑1 (MQ=255) tggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaaa > 1:1982118‑M1/74‑136 (MQ=255) ggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaaa < 1:1569711‑M1/63‑1 (MQ=255) ggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaaa < 1:221919‑M1/63‑1 (MQ=255) ggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaaa < 1:96163‑M1/63‑1 (MQ=255) ttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTa < 2:2245052‑M1/68‑1 (MQ=255) tgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCa < 1:1506986‑M1/71‑1 (MQ=255) gactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATc < 2:179731‑M1/73‑1 (MQ=255) tctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACAttt < 2:432471‑M1/79‑1 (MQ=255) tgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCATATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTc < 1:691671‑M1/81‑1 (MQ=255) gaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCTTCATATCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCAcattttaa < 1:301335‑M1/82‑3 (MQ=255) gaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCa < 1:1060132‑M1/82‑1 (MQ=255) ataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAAt > 1:1179698‑M1/53‑136 (MQ=255) ataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAAt > 1:223531‑M1/53‑136 (MQ=255) aaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAAttt < 2:2294906‑M1/86‑1 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATCGCTGAATCTCTATTTTGCCAAATTCAAGAGTGAATTGCTTAAAAAAGAACAACACATTTTCAATTTttgaa < 1:1540673‑M1/91‑3 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCTTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCa < 1:2325609‑M1/91‑1 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 1:117128‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 2:325931‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 2:210258‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc > 2:603818‑M1/46‑135 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc > 1:1146106‑M1/46‑135 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCa < 1:731239‑M1/91‑1 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCa < 1:786872‑M1/91‑1 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCa < 2:1260926‑M1/91‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 1:1468565‑M1/96‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 1:1468558‑M1/96‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGAAgttgt < 2:1232355‑M1/96‑1 (MQ=255) tagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgtt < 1:1239476‑M1/97‑1 (MQ=255) tagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgtt < 2:1776232‑M1/97‑1 (MQ=255) tagtagagcaggtgtagcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTTAATATCTTTTTTGCCAAATTCATTAGTGATTTGCTTAAATCTTAGCATCACATTTTCAATATttgaagtagatc < 1:1906853‑M1/98‑6 (MQ=255) gagcaggtgttgcacttcaattttaaatcgaggCTTTTAAt < 2:1846591‑M1/8‑1 (MQ=255) gagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTATGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACAATTTCAATTTTTGCAGTTGTTCCAAt < 2:1969584‑M1/102‑1 (MQ=255) gcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATcc > 2:1626621‑M1/32‑135 (MQ=255) gcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATcc > 1:794390‑M1/32‑135 (MQ=255) ggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAttt < 2:974309‑M1/56‑1 (MQ=255) ggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:1241818‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaaa > 2:2065179‑M1/28‑90 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaaa < 1:2065179‑M1/63‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 2:2418568‑M1/28‑116 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg < 1:2418568‑M1/89‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc < 2:1690466‑M1/90‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc > 1:1690511‑M1/28‑117 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc > 1:1690466‑M1/28‑117 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc < 2:1690511‑M1/90‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:1826901‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:533733‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:2313109‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:476230‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:1368783‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:1286268‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:131202‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATACATTCGTGATTTGCTTAAATCTTAGCAGCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:1262520‑M1/108‑1 (MQ=255) gttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGccacc < 2:1439021‑M1/111‑1 (MQ=255) ttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGccacca < 2:1813324‑M1/112‑1 (MQ=255) ttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGccacca < 2:726568‑M1/112‑1 (MQ=255) tgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGccacca < 1:1015781‑M1/112‑1 (MQ=255) gcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATcc < 2:1627889‑M1/104‑1 (MQ=255) gcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAAc < 2:2191364‑M1/114‑1 (MQ=255) gcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAAc < 1:1208151‑M1/114‑1 (MQ=255) cacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACg < 2:45881‑M1/115‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 2:766080‑M1/117‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 1:1194333‑M1/117‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 2:521826‑M1/117‑1 (MQ=255) cttcaattataaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTATTGCCAAATTCATTCGAGATTTGCTTAAATCTTAGCAACACATTTTCAAATTTTGAAGTTGTTGAAAACCCGCccccaaatat < 2:1087032‑M1/117‑5 (MQ=255) caattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGt < 2:1552160‑M1/119‑1 (MQ=255) ttttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGt < 2:1670386‑M1/123‑1 (MQ=255) ttttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGt > 1:2020093‑M1/14‑136 (MQ=255) ttttaaatcgaggCTGTTAATTTTTCCGTCATAGCTGAATCTCTGTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCTCCGATGGTCGt < 1:249533‑M1/123‑1 (MQ=255) ttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGa > 1:2245052‑M1/12‑136 (MQ=255) cgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTcc > 2:1468558‑M1/6‑136 (MQ=255) cgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTcc > 2:1468565‑M1/6‑136 (MQ=255) cgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTc < 1:1939522‑M1/130‑1 (MQ=255) cTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTCCCCCg > 1:55067/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTCCCCCG > TrimmedAssembly_T66_contig_31/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |