| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_32 | = 1640 | 0 (0.000) | 247 (0.720) +TTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAA |
59/158 | 0.0 | 78.9% | intergenic (+24/–) | rasttk_feature_creation_tool=RNA_reps_SSU_rRNA/– | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/– |
| ? | TrimmedAssembly_T66_contig_7 | = 137493 | 217 (1.380) | noncoding (69/71 nt) | rasttk_feature_creation_tool=tRNAscan‑SE | tRNA‑Gly‑TCC | |||||
Only 100 of 680 total aligned reads displayed.
CGGTGGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_32/1507‑1640 | cGGTGGGGTAACCTTTTAGGAACCAGCTGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAc < 2:364979‑M2/135‑2 (MQ=255) tGGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcg > 2:1976374‑M2/1‑131 (MQ=255) ggTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcga > 1:1071909‑M1/1‑128 (MQ=255) tAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaa < 2:1159437‑M1/135‑10 (MQ=255) tAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaa > 1:1928179‑M2/1‑126 (MQ=255) ccTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactt < 2:2284350‑M1/136‑14 (MQ=255) cTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaacttt < 2:19381‑M1/136‑15 (MQ=255) cTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaacttt > 1:1154633‑M1/1‑122 (MQ=255) tAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgttt > 1:1588934‑M1/1‑118 (MQ=255) ggAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttag > 2:1954169‑M1/1‑116 (MQ=255) gAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagt > 2:2030480‑M1/1‑115 (MQ=255) gAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagt > 1:974792‑M1/1‑115 (MQ=255) ccAGCTGCCTAAGGTGGGACAGATGATTAGGGTGACGTCGTAACAAGGTAGCCGTAGGAGCACCGGCGGCTGGATCACCTCCTTTCGAAGGAATATTACGGAAACCTACACAcgcgtcgcacctttgtttagtttt > 2:1484780‑M2/1‑112 (MQ=255) ccAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagtttt < 1:2247021‑M1/136‑25 (MQ=255) ccAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagtttt > 1:624856‑M2/1‑112 (MQ=255) gctgccTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgag < 2:29344‑M2/136‑28 (MQ=255) gccTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGACCCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagagg > 1:760753‑M1/1‑106 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGTTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaaatctcaaa < 2:95864‑M2/135‑44 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatt > 1:2284984‑M1/1‑92 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagtttt > 1:1905690‑M1/1‑92 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaacttt < 2:1581252‑M1/106‑15 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaa < 1:91577‑M2/135‑44 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaa < 1:577455‑M2/135‑44 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaa < 2:622982‑M2/135‑44 (MQ=255) aGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagtttt < 1:1175795‑M2/116‑25 (MQ=255) gatTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaat < 1:1770252‑M1/136‑49 (MQ=255) atTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaata > 2:2105592‑M1/1‑87 (MQ=255) atTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaata > 1:1202997‑M1/1‑87 (MQ=255) atTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaata > 1:234433‑M1/1‑87 (MQ=255) atTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactatgtttagttttgagagatttaactctcaaaacttgt < 2:487530‑M2/136‑50 (MQ=255) tAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttc > 1:1364596‑M2/1‑85 (MQ=255) tAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgt < 2:922150‑M2/134‑50 (MQ=255) ggTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgt > 1:1701446‑M1/1‑82 (MQ=255) ggTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttcttt < 2:1445130‑M2/136‑55 (MQ=255) ggTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttcttt < 2:2137043‑M2/136‑55 (MQ=255) ggTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttcttt < 2:437868‑M2/136‑55 (MQ=255) gAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtctagttttgagagatttaactctcaaaacttgttctttga > 1:684167‑M2/1‑79 (MQ=255) aGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcttttttt > 2:1086269‑M1/1‑77 (MQ=255) aGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttt < 2:1003419‑M1/135‑59 (MQ=255) tCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgg > 2:542799‑M1/1‑75 (MQ=255) tCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaact < 1:1614697‑M2/136‑62 (MQ=255) cAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctat > 1:1510562‑M1/1‑69 (MQ=255) cAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataa < 2:566605‑M2/136‑68 (MQ=255) aGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatag < 2:1706636‑M1/136‑70 (MQ=255) tAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagct < 2:328189‑M1/135‑72 (MQ=255) tAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagct < 2:660503‑M1/135‑72 (MQ=255) tAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagct < 2:2313461‑M1/135‑72 (MQ=255) tAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagct < 1:95101‑M1/135‑72 (MQ=255) gCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagtttt > 1:869879‑M1/1‑62 (MQ=255) gTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctg > 1:2171865‑M1/1‑59 (MQ=255) aGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggt < 2:841106‑M1/136‑80 (MQ=255) gagaACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggttt > 2:1902811‑M1/1‑55 (MQ=255) agaACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattt > 1:1398890‑M2/1‑54 (MQ=255) agaACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattt > 2:1322164‑M2/1‑54 (MQ=255) gaACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgtttttcgggcctatagctcagctggtttag > 2:2437341‑M1/1‑53 (MQ=255) gaACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttt < 1:2017967‑M2/136‑84 (MQ=255) aCCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttaga < 2:1269246‑M1/135‑85 (MQ=255) aCCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttaga < 2:2257640‑M1/135‑85 (MQ=255) ccTGCTGCTGTATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaagtttgtttagttttgagaggtctaactctcaatttaatacgcgttttttgggcctatagctcagctggtttagagc < 2:78858‑M1/136‑87 (MQ=255) ccTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagc < 1:2123431‑M1/136‑87 (MQ=255) tGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgc < 2:1202418‑M1/136‑89 (MQ=255) tGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcata > 1:2078119‑M2/1‑48 (MQ=255) tGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcata > 1:437868‑M2/1‑48 (MQ=255) tGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcata < 2:1655691‑M2/136‑89 (MQ=255) tGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcata > 2:2074574‑M2/1‑48 (MQ=255) tGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgttaagttttgagagatttaactatcaaaacttgttcattgaaaactagataatatcaaatatatattttcata < 1:1207817‑M2/136‑89 (MQ=255) gCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgc > 2:1533756‑M1/1‑47 (MQ=255) gCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgc > 1:1831903‑M1/1‑47 (MQ=255) gCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataa < 1:1739143‑M2/136‑90 (MQ=255) gCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataa < 2:256222‑M2/136‑90 (MQ=255) gCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataa < 1:1791179‑M2/136‑90 (MQ=255) gCGGCTCGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagtttagagtggtctaactctcaatttaataagcgttttttgggccgatagctcagctggtttagagcgc > 1:2397492‑M1/1‑47 (MQ=255) ggCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatctcaaatatattttttcataat > 2:2177705‑M2/1‑45 (MQ=255) cTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacg > 1:364025‑M1/1‑43 (MQ=255) cTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacg > 1:2056137‑M1/1‑43 (MQ=255) tGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacg > 1:1324424‑M1/1‑42 (MQ=255) aTCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaacc > 2:1742871‑M2/1‑39 (MQ=255) aCCTCCTTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaact > 2:1623898‑M1/1‑36 (MQ=255) tcctTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgt < 2:1831903‑M1/136‑104 (MQ=255) tcctTTCTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaac < 1:821937‑M2/135‑103 (MQ=255) cctTTCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtg > 1:1008379‑M1/1‑32 (MQ=255) tCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtgaggt < 1:1129876‑M1/136‑109 (MQ=255) tCTAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtgaggt < 2:89192‑M1/136‑109 (MQ=255) cTAAGGAATATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgt < 2:237913‑M2/136‑110 (MQ=255) tAAGGAATATTACGGAAACCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggt < 1:281720‑M1/105‑80 (MQ=255) aaTATTACGGAAACCTACACAgtcttcgaaactttgtttagttttgagaggtctatctctcaatttaataagcgttttttgggcctatagctcagctggtgtagagcgcacgcctgataagcgtgaggtcgatggt > 1:1671006‑M1/1‑21 (MQ=255) aaTATTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttg < 1:1955005‑M2/136‑116 (MQ=255) atTACGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttgagt < 1:1466485‑M2/136‑119 (MQ=255) aCGGAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttgagtttt < 1:1416163‑M2/136‑122 (MQ=255) ggAAACCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttgagtttttt > 1:496237‑M2/1‑13 (MQ=255) aaaCCTACACAttctacgaaactttgtttagttttgagaggtctaactctcaatttaatacgcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtgaggtcgatggttcaagtcca < 2:727809‑M1/135‑125 (MQ=255) aaaCCTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttcattgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttgagtttttta > 2:1122061‑M2/1‑11 (MQ=255) aCCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtgaggtcgatggttcaagtccattt < 1:2437341‑M1/136‑128 (MQ=255) aCCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtgaggtcgatggttcaagtccattt < 2:138465‑M1/136‑128 (MQ=255) aCCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtgaggtcgatggttcaagtccattt < 2:1789137‑M1/136‑128 (MQ=255) aCCTACACAttcttcgaaactttgtttagttttgagaggtctaactctcaatttaataagcgttttttgggcctatagctcagctggtttagagcgcacgcctgataagcgtgaggtcgatggttcaagtccattt < 1:1229492‑M1/136‑128 (MQ=255) ccTACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttgagttttttattga < 2:1237681‑M2/136‑129 (MQ=255) tACACAcgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctgtgcaaactagagaagatcaaatatattttttcataatgaaaccgataacaccgcgtgttttgtgttttttattgaag < 1:31636‑M2/136‑131 (MQ=255) acacgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttgagttttttattgaagttt > 2:2348998‑M2/1‑3 (MQ=255) acacgcgtcgaaactttgtttagttttgagagatttaactctcaaaacttgttctttgaaaactagataatatcaaatatattttttcataatgaaaccgagaacaccgcgttttttgagttttttattgaagttt > 1:1285108‑M2/1‑3 (MQ=255) | CGGTGGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_32/1507‑1640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |