| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_36 | = 864 | 0 (0.000) | 102 (0.230) +AGTTAGATACATATTATATATACGAAGGCATTTCATTTACACAAGATTCTTGACGCTACC |
32/138 | 0.8 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Transposase/– |
| ? | TrimmedAssembly_T66_contig_9 | = 133707 | 0 (0.000) | intergenic (‑1/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– | |||||
Only 100 of 1290 total aligned reads displayed.
AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 | aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 1:1097948/136‑1 (MQ=40) gAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAag < 2:1737920‑M2/136‑3 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 1:235355‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1002321‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1953349‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 1:253713‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 1:1861856‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:130604‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 1:1340647‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 2:1254647‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 1:623585‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 2:1614355‑M2/1‑132 (MQ=255) aCAATGTCCAACGGAAGATTCTCTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAag > 1:1772153‑M2/1‑132 (MQ=255) cAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtta > 1:2165931‑M2/1‑131 (MQ=255) aaTTTCCACCGGAAGATACACTGGATCGCTTCCTGGTTTCTCAGTTTAATGATTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttag > 2:1305648‑M2/1‑130 (MQ=255) ttCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagata < 1:653551‑M2/136‑10 (MQ=255) tCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatac > 1:103528‑M2/1‑126 (MQ=255) aCGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATTTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatat > 1:2291251‑M2/1‑122 (MQ=255) aCGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatat > 2:1119488‑M2/1‑122 (MQ=255) ggAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatatt > 1:1989780‑M2/1‑120 (MQ=255) ggAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCGTGGAAGCATCATTTATTTAagttagatacatatta < 2:1453633‑M2/136‑17 (MQ=255) gCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcattt > 2:62717‑M2/1‑103 (MQ=255) gCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcattt > 1:1197643‑M2/1‑103 (MQ=255) ccTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGTACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatt < 1:11638‑M2/136‑38 (MQ=255) ccTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatt < 2:2242116‑M2/136‑38 (MQ=255) ggTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttac > 1:1395157‑M2/1‑96 (MQ=255) tttCTCAGTTTAATGTTTCTCACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGAAACCTTGGAAGCATCATTTATTTAagtaagatacatattatatgttcgaaggcatttcatttaca > 2:2034593‑M2/1‑94 (MQ=255) ttCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacaca > 1:1549497‑M2/1‑93 (MQ=255) cAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagat < 1:2217112‑M2/136‑48 (MQ=255) cAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagat < 2:1167483‑M2/136‑48 (MQ=255) aGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagat < 1:2390206‑M2/135‑48 (MQ=255) ttAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattct > 1:305621‑M2/1‑85 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 1:75993‑M2/1‑81 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 2:1668358‑M2/1‑81 (MQ=255) ttATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgcta > 1:435008‑M2/1‑78 (MQ=255) tataACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattttatatacgaaggcatttcatttacacaagattcttgacgctac > 2:1507117‑M2/1‑77 (MQ=255) ataACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctacc > 2:73498‑M2/1‑76 (MQ=255) taACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGTAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacct < 1:1649273‑M1/136‑62 (MQ=255) aaCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgt > 2:839082‑M2/1‑74 (MQ=255) aCGAGAATTCTCTGAAGCGGATACACCGAGTGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagaatctagacgctaccg < 2:1362430‑M2/134‑62 (MQ=255) aCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattagatatacgaaggcatttcatttacacaagattcttgacgctaccgat < 2:288793‑M2/136‑64 (MQ=255) tttctctgAAGCGGATCCAGCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattaaatgtacgaaggcatttcatttacacaagattctttacgctaccaattaag < 2:257504‑M1/132‑68 (MQ=255) aGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagtt > 1:531578‑M2/1‑67 (MQ=255) aGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagtt > 2:1088347‑M2/1‑67 (MQ=255) ctctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgt > 1:374768‑M2/1‑64 (MQ=255) ctctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatact > 2:2095550‑M2/1‑64 (MQ=255) ctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcat > 2:2192413‑M2/1‑62 (MQ=255) tGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcgg > 1:949851‑M2/1‑61 (MQ=255) gAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctacca > 1:1722654‑M1/1‑60 (MQ=255) aGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctct < 1:1234765‑M1/135‑78 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattac > 2:347998‑M2/1‑55 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAtgttagatacatattatatatacgaaggcatttcatttacac > 2:590031‑M2/1‑51 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAggttagatacatattatatatacgaaggcatttcatttacac < 1:590031‑M2/93‑43 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggt > 2:952213‑M2/1‑51 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggt < 2:2362328‑M2/136‑86 (MQ=255) cACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattag < 2:2264550‑M2/136‑87 (MQ=255) cACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattag > 2:48077‑M2/1‑50 (MQ=255) ggTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattata > 1:348770‑M1/1‑43 (MQ=255) ggTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaata < 1:1500264‑M2/134‑92 (MQ=255) ggTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTAGTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaag < 1:2029090‑M2/136‑94 (MQ=255) gTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaact < 1:801717‑M2/136‑95 (MQ=255) gTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatat < 2:1421626‑M1/135‑94 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaactta < 1:1815768‑M2/136‑97 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccg > 2:3679‑M1/1‑40 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatcc < 2:432682‑M1/135‑96 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCAGTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacatta < 1:213432‑M2/136‑97 (MQ=255) aaGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatcc > 2:100113‑M2/1‑37 (MQ=255) cAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatc > 2:1574120‑M2/1‑29 (MQ=255) cAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactg < 2:503087‑M2/136‑108 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 1:242491‑M2/1‑28 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgta < 1:873621‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgta < 2:2421674‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatc > 2:1043695‑M2/1‑28 (MQ=255) acacCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattc < 1:681775‑M1/135‑111 (MQ=255) cacCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcg < 2:1983928‑M1/135‑112 (MQ=255) cacCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagc > 2:665966‑M2/1‑24 (MQ=255) cTTGGAAGCAACATTTATTTAagttagataaatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaaggtcatcatcattactcttattatcaagttgactatcaacgtattctgca < 2:1844418‑M2/136‑116 (MQ=255) ggAAGCATCATTTATTTAagttagatacatcttagatatacgaaggcatttcagttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaacattattagctccgaagtcgtaaagcgcggggaga > 2:538125‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtga > 2:1955218‑M2/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgtttttt > 1:908235‑M2/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactaatcaacaagtg < 2:1903974‑M2/133‑116 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaagg < 2:1197844‑M2/46‑29 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtagaa < 1:1123552‑M1/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtaga > 1:718462‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtaga > 2:1883443‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaa < 1:145994‑M1/124‑107 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcat < 2:924831‑M2/134‑117 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcat < 2:1809599‑M2/134‑117 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccgatt > 2:794728‑M1/1‑16 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattct < 2:1778713‑M2/135‑120 (MQ=255) tcatTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctag > 2:2144585‑M2/1‑11 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgggtatcgcc < 1:2244‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacat > 2:2301276‑M2/1‑8 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaattcgctttgct < 2:1539344‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaattcgctttgct < 1:479726‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccgattacgtttgt > 1:833896‑M1/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtagaactaacagtca > 2:698030‑M1/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctagaaa > 1:1600431‑M2/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctagaa < 1:1910779‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaaaaagagccac < 1:2083451‑M2/136‑129 (MQ=255) | AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |