| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | = 88613 | 104 (0.700) | 141 (0.960) | 44/258 | 1.1 | 73.1% | coding (224/300 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_1 | = 655835 | 0 (0.000) | intergenic (‑78/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– | |||||
Only 100 of 142 total aligned reads displayed.
TCACGCTTAACCAAAACCAAAATGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/655700‑655835 | tCACGCTTAACCAAAACCAAAATGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGt > 2:637776/1‑136 (MQ=255) aaaaccaaaaTGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaa < 1:1111241‑M2/136‑13 (MQ=255) aaaccaaaaTGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaat > 2:1553973‑M2/1‑123 (MQ=255) aaaccaaaaTGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaat > 1:1422786‑M2/1‑123 (MQ=255) caaaaTGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatct < 1:2404005‑M2/136‑18 (MQ=255) caaaaTGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatct < 1:1181092‑M2/136‑18 (MQ=255) aTGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtg > 2:758106‑M2/1‑115 (MQ=255) aTGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtg > 1:270752‑M2/1‑115 (MQ=255) gAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgta < 1:472993‑M2/136‑24 (MQ=255) gATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaat < 2:1486761‑M2/135‑27 (MQ=255) tAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgca < 1:1922818‑M2/136‑30 (MQ=255) ggTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGTTTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttct > 2:1728582‑M2/1‑95 (MQ=255) ggTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttct > 1:1239601‑M2/1‑95 (MQ=255) ggTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttctgtaaatgcataaaagatttct > 2:298319‑M2/1‑95 (MQ=255) tCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctg > 1:1438890‑M2/1‑93 (MQ=255) tCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctg > 1:1643202‑M2/1‑93 (MQ=255) cGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaatt > 2:2371999‑M2/1‑89 (MQ=255) cGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaatt > 2:1305457‑M2/1‑89 (MQ=255) cGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaatt > 2:154156‑M2/1‑89 (MQ=255) cGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaatt > 1:337192‑M2/1‑89 (MQ=255) cGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaatt > 2:215366‑M2/1‑89 (MQ=255) ccGCATGTCGCTCCCCCCTAACTCGTGATTCCAATGACATTACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatag > 2:1183947‑M2/1‑84 (MQ=255) ccGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatag > 1:2146374‑M2/1‑84 (MQ=255) ccGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatag > 1:974305‑M2/1‑84 (MQ=255) cGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtataga < 2:545414‑M2/136‑54 (MQ=255) aTGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaat < 2:1831016‑M2/136‑57 (MQ=255) aTGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaat < 2:2242850‑M2/93‑14 (MQ=255) gACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatag > 1:1621135‑M2/1‑78 (MQ=255) gACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatag > 2:1358228‑M2/1‑78 (MQ=255) cGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagg > 1:2090542‑M2/1‑76 (MQ=255) tCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaat > 2:2435905‑M2/1‑73 (MQ=255) tCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaat > 2:1111241‑M2/1‑73 (MQ=255) ccccTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgcc > 2:1452230‑M2/1‑70 (MQ=255) tAACTCGTGATTCCAATGAAATACCCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcc > 1:777034‑M2/1‑66 (MQ=255) gaacTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcc > 2:1762172‑M2/2‑66 (MQ=255) cTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttccctt > 1:1831016‑M2/1‑63 (MQ=255) gATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgat < 1:582588‑M2/136‑79 (MQ=255) gATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttat < 1:2357687‑M2/133‑76 (MQ=255) gATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttat < 1:2357499‑M2/133‑76 (MQ=255) gATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttat > 2:2357499‑M2/1‑58 (MQ=255) gATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttat > 2:2357687‑M2/1‑58 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 1:947497‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 1:935877‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 2:86621‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 2:1451767‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 2:1623366‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 2:2194130‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 1:101655‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 1:1117436‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 1:1117437‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 1:327256‑M2/136‑81 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaata > 1:430017‑M2/1‑56 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaatt < 1:1576711‑M2/102‑47 (MQ=255) ttCCAATGAAATAACCGATTGGAATAACGCCTATTATAGACAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatat < 2:2456811‑M2/136‑81 (MQ=255) ccAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatattt > 1:576508‑M2/1‑54 (MQ=255) ccAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatattt > 2:1228681‑M2/1‑54 (MQ=255) aaTAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaacc > 1:1353735‑M2/1‑47 (MQ=255) aaCCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccaca > 2:1694640‑M2/1‑44 (MQ=255) gATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaa > 1:1732859‑M2/1‑40 (MQ=255) ttGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaa > 1:1451767‑M2/1‑38 (MQ=255) aTAACGCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatca > 2:2404005‑M2/1‑33 (MQ=255) aTAACGCCTATTATAGGAAGTGCGCAATTAAGTgagatcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaattgggaatgccttcccttatgatatttagtaaccacagaaaacatca > 1:1028067‑M2/1‑33 (MQ=255) gCCTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggag > 2:2157985‑M2/1‑28 (MQ=255) cTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggc > 2:484193‑M2/1‑26 (MQ=255) cTATTATAGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggc < 1:2229011‑M2/136‑111 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattc < 1:810859‑M2/135‑115 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattc < 2:377123‑M2/135‑115 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattc < 1:1316859‑M2/135‑115 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattc < 1:1484746‑M2/135‑115 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattc < 2:2062358‑M2/135‑115 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattc < 1:1690944‑M2/135‑115 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattc < 1:2048192‑M2/135‑115 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttat < 1:1883592‑M2/96‑76 (MQ=255) ataGGCAGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttat > 2:1883592‑M2/1‑21 (MQ=255) aGTGCGCAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatga < 1:2397639‑M2/136‑122 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:1356295‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 1:2235397‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:1039024‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:720148‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:1139242‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:1159900‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:1582681‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:763093‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 1:290933‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:1639445‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 2:1895045‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 1:26014‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggag > 1:1073175‑M2/1‑10 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggag > 1:1387362‑M2/1‑10 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggag < 2:1073175‑M2/118‑109 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatca < 2:593478‑M2/112‑103 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatattt > 2:426038‑M2/1‑10 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatattt > 1:1059059‑M2/1‑10 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatattt < 1:426038‑M2/92‑83 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaagtgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatga < 1:2036757‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatatctgaattgtatagaaatagggaatgccttcccttatgatatttagaaaccacagaaaacatcacaggaggcatacccaatgaatga < 1:1028197‑M2/135‑126 (MQ=255) gcAATTAAGTgagagcgtaaaagatcttgtgtaaatgcataaaagatttcagaattgtatagaaatagtgaatgccttcccttatgctatttagtaaccacagaaaacatcacaggaggcattccccatgcatga < 2:297118‑M2/135‑126 (MQ=255) aaTTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatgaact < 1:2243564‑M2/136‑129 (MQ=255) aTTAAGTgagagcgtaaaatatcttgtgtaaatgcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcacaggaggcattccccatgaatgaactt > 2:810859‑M2/1‑7 (MQ=255) tttAGTgagatcgtaaaatatcttgtgtaaattcataaaagatttctgaattgtatagaaatagggaatgccttcccttatgatatttagtaaccacagaaaacatcaccggatgcattccccatgaatgaactta > 1:990143‑M2/1‑6 (MQ=255) | TCACGCTTAACCAAAACCAAAATGAGCGATAAAACCGAACCGGTCGACGTATCCGCATGACGCTCCCCCCTAACTCGTGATTCCAATGAAATAACCGATTGGAATAACGCCTATTATAGGCAGTGCGCAATTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/655700‑655835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |