| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_11 | = 96142 | 0 (0.000) | 142 (0.890) | 34/204 | 1.8 | 76.3% | intergenic (+314/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_9 | = 72 | 88 (0.500) | intergenic (–/+187) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 164 total aligned reads displayed.
TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/95982‑96142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtctggaaaaatcttcggatttttcCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_9/72‑1 TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAG > 2:73520/1‑136 TGAACTTTTCCCCGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTG > 2:485933/1‑136 gTCCCAGTGGGTCTACGCTGGCTGCTTTTGAACTTAAGAATCGGCACATTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAAT < 2:1474144/135‑1 TTCCCCGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAAT < 1:2083038/136‑1 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 1:1121889/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 1:1226193/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:1432354/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:1611520/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTAAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 1:1736432/1‑135 GGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCG < 1:1953227/133‑1 GGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCG < 1:1722653/133‑1 GGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCG < 2:1318972/133‑1 GTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTT > 1:638301/1‑136 TAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTT > 2:2309760/1‑135 cgcaGGCTGCTATTGAACTTAAGAATCGGCACGATTTCATCATGATTGTTTAATAACGATGAGTAATCAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:278150/132‑1 cGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:278144/135‑1 AGCTGGCTGCTTTTGAACTTAAGAATCGGCACGATTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:1377179/136‑1 TGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt > 2:899897/1‑135 TGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt < 1:309768/136‑2 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTATTAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:786002/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGCGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGgt > 2:1005524/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAATTCTCTAGAAACAAAACAGGTCTGGAAAAATCGTCGGATTTTTCCAGACCTGtt > 2:759306/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1540478/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:461379/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1259295/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:2272460/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:860116/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:2215551/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:1060177/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:110995/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:315370/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:1181284/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:628055/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtg > 2:2312906/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCAAGACCTGtt > 1:362966/1‑134 CTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTT > 1:70764/1‑136 CTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTT > 2:497167/1‑136 CTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTT > 2:560819/1‑136 TTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTT > 2:2433926/1‑136 AATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGTATTTTTCCAGACCTGTTTTTGATATAATAGAA > 1:1471457/1‑136 AATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAA > 1:539369/1‑136 AATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAA > 2:2554159/1‑136 TCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAA < 2:1243034/136‑1 ACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAA < 1:2063426/136‑1 TTAATCATGATTGTTTAATAACGATGAGTAATAAAAAATCGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAga < 2:648935/136‑3 TTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAga < 1:161376/136‑3 TAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACTAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCTGATTTTTCCAGACCAGTTTTTTATATAATAGAAAATAAAAAAAga > 1:530916/1‑133 TAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAgag < 1:1365772/136‑4 TCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAgagcat < 1:1914282/136‑7 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1072773/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:550177/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:656898/136‑1 GATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:2489963/136‑1 GATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:2282955/136‑1 GATTGTTTAATAAAGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:2112714/136‑1 GATGGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:764673/136‑1 TGTTTAATAACGATGATTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC < 1:2286488/136‑1 TGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:480674/1‑136 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:628055/136‑1 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 1:2401757/1‑136 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:1795712/136‑1 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:177603/136‑1 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:2309760/136‑1 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:228781/136‑1 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:1773467/136‑1 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTATTTGATATAATAGAACAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:2286674/136‑1 TAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGA > 2:2341196/1‑135 AACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT > 1:73226/1‑135 CGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT < 2:362966/136‑1 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 2:883368/1‑136 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 1:2268142/1‑126 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGACGCACCCGATACTCTACG > 2:1683374/1‑136 TAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT > 1:1319969/1‑136 TAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT < 1:1141619/136‑1 AAAAACGAGGCTGTGACATAAGTCTCTAGAAACAATACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTAT > 1:2290322/1‑135 AAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 2:110995/136‑3 AAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 2:1285894/136‑3 AAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTATTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:2334185/136‑3 aaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcg > 1:811784/3‑132 aaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcg > 2:754009/3‑132 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga < 2:805849/135‑6 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga > 1:390393/2‑131 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga < 1:2115566/135‑6 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga > 1:293126/2‑131 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga < 2:408727/135‑6 CGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga > 1:60170/1‑131 GAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCAACGAAATTATCctcgaa > 1:1499194/1‑130 GGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:835180/102‑1 GGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT > 1:835180/1‑102 GGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA > 2:1256277/1‑59 GTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT > 1:74547/1‑98 GTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:2042030/96‑1 GTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG > 2:2042030/1‑96 CTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA > 2:161970/1‑44 TCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAgag > 2:2480319/1‑76 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAga > 1:124007/1‑71 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:130931/109‑3 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:130903/109‑3 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct > 2:130931/1‑107 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1782315/79‑1 TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/95982‑96142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtctggaaaaatcttcggatttttcCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_9/72‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |